Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0296

Experiment: m.b. Fusidic 0.00049 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0295 and B158DRAFT_0296 are separated by 394 nucleotidesB158DRAFT_0296 and B158DRAFT_0297 are separated by 606 nucleotidesB158DRAFT_0297 and B158DRAFT_0298 are separated by 2 nucleotides B158DRAFT_0295: B158DRAFT_0295 - hydroxymethylpyrimidine synthase, at 297,562 to 299,445 _0295 B158DRAFT_0296: B158DRAFT_0296 - Uncharacterized protein conserved in bacteria, at 299,840 to 300,304 _0296 B158DRAFT_0297: B158DRAFT_0297 - Uncharacterized conserved protein, at 300,911 to 301,297 _0297 B158DRAFT_0298: B158DRAFT_0298 - Cysteine synthase, at 301,300 to 302,352 _0298 Position (kb) 299 300 301Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 298.931 kb on - strand, within B158DRAFT_0295at 299.014 kb on + strand, within B158DRAFT_0295at 299.054 kb on + strand, within B158DRAFT_0295at 299.054 kb on + strand, within B158DRAFT_0295at 299.062 kb on - strand, within B158DRAFT_0295at 299.062 kb on - strand, within B158DRAFT_0295at 299.067 kb on + strand, within B158DRAFT_0295at 299.075 kb on - strand, within B158DRAFT_0295at 299.075 kb on - strand, within B158DRAFT_0295at 299.131 kb on - strand, within B158DRAFT_0295at 299.164 kb on + strand, within B158DRAFT_0295at 299.186 kb on - strand, within B158DRAFT_0295at 299.191 kb on + strand, within B158DRAFT_0295at 299.199 kb on - strand, within B158DRAFT_0295at 299.199 kb on - strand, within B158DRAFT_0295at 299.199 kb on - strand, within B158DRAFT_0295at 299.233 kb on - strand, within B158DRAFT_0295at 299.237 kb on + strand, within B158DRAFT_0295at 299.238 kb on + strand, within B158DRAFT_0295at 299.238 kb on + strand, within B158DRAFT_0295at 299.238 kb on + strand, within B158DRAFT_0295at 299.238 kb on + strand, within B158DRAFT_0295at 299.246 kb on - strand, within B158DRAFT_0295at 299.246 kb on - strand, within B158DRAFT_0295at 299.246 kb on - strand, within B158DRAFT_0295at 299.248 kb on + strand, within B158DRAFT_0295at 299.250 kb on + strand, within B158DRAFT_0295at 299.250 kb on + strand, within B158DRAFT_0295at 299.254 kb on - strand, within B158DRAFT_0295at 299.256 kb on - strand, within B158DRAFT_0295at 299.256 kb on - strand, within B158DRAFT_0295at 299.256 kb on - strand, within B158DRAFT_0295at 299.262 kb on + strandat 299.316 kb on + strandat 299.358 kb on - strandat 299.359 kb on - strandat 299.366 kb on - strandat 299.462 kb on + strandat 299.523 kb on + strandat 299.528 kb on + strandat 299.528 kb on + strandat 299.561 kb on - strandat 299.630 kb on + strandat 299.711 kb on - strandat 299.711 kb on - strandat 299.756 kb on + strandat 299.759 kb on + strandat 299.845 kb on + strandat 299.878 kb on - strandat 299.878 kb on - strandat 299.878 kb on - strandat 299.882 kb on + strandat 299.882 kb on + strandat 299.941 kb on - strand, within B158DRAFT_0296at 299.965 kb on + strand, within B158DRAFT_0296at 299.978 kb on + strand, within B158DRAFT_0296at 299.986 kb on - strand, within B158DRAFT_0296at 299.986 kb on - strand, within B158DRAFT_0296at 299.986 kb on - strand, within B158DRAFT_0296at 299.991 kb on - strand, within B158DRAFT_0296at 300.064 kb on - strand, within B158DRAFT_0296at 300.105 kb on - strand, within B158DRAFT_0296at 300.185 kb on + strand, within B158DRAFT_0296at 300.185 kb on + strand, within B158DRAFT_0296at 300.188 kb on - strand, within B158DRAFT_0296at 300.190 kb on + strand, within B158DRAFT_0296at 300.190 kb on + strand, within B158DRAFT_0296at 300.190 kb on + strand, within B158DRAFT_0296at 300.195 kb on + strand, within B158DRAFT_0296at 300.198 kb on - strand, within B158DRAFT_0296at 300.209 kb on + strand, within B158DRAFT_0296at 300.250 kb on + strand, within B158DRAFT_0296at 300.250 kb on + strand, within B158DRAFT_0296at 300.253 kb on - strand, within B158DRAFT_0296at 300.263 kb on - strandat 300.263 kb on - strandat 300.265 kb on + strandat 301.085 kb on + strand, within B158DRAFT_0297at 301.156 kb on + strand, within B158DRAFT_0297at 301.156 kb on + strand, within B158DRAFT_0297at 301.218 kb on + strand, within B158DRAFT_0297

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml
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298,931 - B158DRAFT_0295 0.73 -0.0
299,014 + B158DRAFT_0295 0.77 +1.9
299,054 + B158DRAFT_0295 0.79 -0.9
299,054 + B158DRAFT_0295 0.79 +1.6
299,062 - B158DRAFT_0295 0.80 +0.6
299,062 - B158DRAFT_0295 0.80 -0.0
299,067 + B158DRAFT_0295 0.80 +1.0
299,075 - B158DRAFT_0295 0.80 -0.0
299,075 - B158DRAFT_0295 0.80 -0.6
299,131 - B158DRAFT_0295 0.83 +2.6
299,164 + B158DRAFT_0295 0.85 +1.3
299,186 - B158DRAFT_0295 0.86 -0.4
299,191 + B158DRAFT_0295 0.86 +0.7
299,199 - B158DRAFT_0295 0.87 +1.6
299,199 - B158DRAFT_0295 0.87 +1.8
299,199 - B158DRAFT_0295 0.87 +0.5
299,233 - B158DRAFT_0295 0.89 +3.8
299,237 + B158DRAFT_0295 0.89 +1.8
299,238 + B158DRAFT_0295 0.89 -1.7
299,238 + B158DRAFT_0295 0.89 +1.6
299,238 + B158DRAFT_0295 0.89 +0.0
299,238 + B158DRAFT_0295 0.89 -1.7
299,246 - B158DRAFT_0295 0.89 +1.1
299,246 - B158DRAFT_0295 0.89 +1.6
299,246 - B158DRAFT_0295 0.89 +2.2
299,248 + B158DRAFT_0295 0.89 +0.2
299,250 + B158DRAFT_0295 0.90 +0.4
299,250 + B158DRAFT_0295 0.90 -0.0
299,254 - B158DRAFT_0295 0.90 +0.4
299,256 - B158DRAFT_0295 0.90 +0.4
299,256 - B158DRAFT_0295 0.90 +2.0
299,256 - B158DRAFT_0295 0.90 -0.6
299,262 + +0.4
299,316 + +0.1
299,358 - +0.4
299,359 - -0.3
299,366 - +1.6
299,462 + -0.2
299,523 + -1.4
299,528 + -0.3
299,528 + +1.5
299,561 - -0.5
299,630 + +0.7
299,711 - +1.6
299,711 - +0.2
299,756 + -0.5
299,759 + -2.2
299,845 + -0.2
299,878 - -2.2
299,878 - -0.8
299,878 - -0.0
299,882 + +0.3
299,882 + +0.5
299,941 - B158DRAFT_0296 0.22 +0.6
299,965 + B158DRAFT_0296 0.27 +0.1
299,978 + B158DRAFT_0296 0.30 -0.1
299,986 - B158DRAFT_0296 0.31 +0.4
299,986 - B158DRAFT_0296 0.31 +0.1
299,986 - B158DRAFT_0296 0.31 -0.8
299,991 - B158DRAFT_0296 0.32 -0.6
300,064 - B158DRAFT_0296 0.48 +1.0
300,105 - B158DRAFT_0296 0.57 -0.6
300,185 + B158DRAFT_0296 0.74 +0.6
300,185 + B158DRAFT_0296 0.74 +0.4
300,188 - B158DRAFT_0296 0.75 +2.2
300,190 + B158DRAFT_0296 0.75 +1.2
300,190 + B158DRAFT_0296 0.75 +1.8
300,190 + B158DRAFT_0296 0.75 +1.4
300,195 + B158DRAFT_0296 0.76 -1.2
300,198 - B158DRAFT_0296 0.77 -1.3
300,209 + B158DRAFT_0296 0.79 -1.1
300,250 + B158DRAFT_0296 0.88 +1.3
300,250 + B158DRAFT_0296 0.88 -0.0
300,253 - B158DRAFT_0296 0.89 +1.7
300,263 - -0.8
300,263 - -1.6
300,265 + -0.2
301,085 + B158DRAFT_0297 0.45 -1.2
301,156 + B158DRAFT_0297 0.63 +0.0
301,156 + B158DRAFT_0297 0.63 -0.6
301,218 + B158DRAFT_0297 0.79 -0.8

Or see this region's nucleotide sequence