Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0262

Experiment: m.b. Fusidic 0.00049 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0261 and B158DRAFT_0262 are separated by 363 nucleotidesB158DRAFT_0262 and B158DRAFT_0263 are separated by 98 nucleotidesB158DRAFT_0263 and B158DRAFT_0264 are separated by 128 nucleotides B158DRAFT_0261: B158DRAFT_0261 - catalase/peroxidase HPI, at 265,949 to 268,180 _0261 B158DRAFT_0262: B158DRAFT_0262 - hypothetical protein, at 268,544 to 269,149 _0262 B158DRAFT_0263: B158DRAFT_0263 - Predicted redox protein, regulator of disulfide bond formation, at 269,248 to 269,646 _0263 B158DRAFT_0264: B158DRAFT_0264 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 269,775 to 270,410 _0264 Position (kb) 268 269 270Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 267.554 kb on + strand, within B158DRAFT_0261at 267.683 kb on + strand, within B158DRAFT_0261at 267.691 kb on - strand, within B158DRAFT_0261at 267.691 kb on - strand, within B158DRAFT_0261at 267.703 kb on + strand, within B158DRAFT_0261at 267.711 kb on - strand, within B158DRAFT_0261at 267.729 kb on + strand, within B158DRAFT_0261at 267.737 kb on - strand, within B158DRAFT_0261at 267.737 kb on - strand, within B158DRAFT_0261at 267.737 kb on - strand, within B158DRAFT_0261at 267.737 kb on - strand, within B158DRAFT_0261at 267.756 kb on + strand, within B158DRAFT_0261at 267.785 kb on - strand, within B158DRAFT_0261at 267.787 kb on + strand, within B158DRAFT_0261at 267.797 kb on + strand, within B158DRAFT_0261at 267.802 kb on + strand, within B158DRAFT_0261at 267.854 kb on + strand, within B158DRAFT_0261at 267.854 kb on + strand, within B158DRAFT_0261at 267.900 kb on + strand, within B158DRAFT_0261at 267.924 kb on - strand, within B158DRAFT_0261at 267.924 kb on - strand, within B158DRAFT_0261at 267.987 kb on - strandat 267.988 kb on + strandat 267.988 kb on + strandat 267.997 kb on - strandat 268.020 kb on + strandat 268.028 kb on - strandat 268.028 kb on - strandat 268.038 kb on + strandat 268.088 kb on + strandat 268.135 kb on + strandat 268.331 kb on + strandat 268.331 kb on + strandat 268.331 kb on + strandat 268.339 kb on - strandat 268.358 kb on + strandat 268.358 kb on + strandat 268.364 kb on + strandat 268.371 kb on - strandat 268.456 kb on + strandat 268.466 kb on + strandat 268.469 kb on - strandat 268.469 kb on - strandat 268.474 kb on - strandat 268.474 kb on - strandat 268.507 kb on + strandat 268.536 kb on - strandat 268.614 kb on + strand, within B158DRAFT_0262at 268.615 kb on - strand, within B158DRAFT_0262at 268.615 kb on - strand, within B158DRAFT_0262at 268.622 kb on - strand, within B158DRAFT_0262at 268.632 kb on - strand, within B158DRAFT_0262at 268.646 kb on + strand, within B158DRAFT_0262at 268.646 kb on + strand, within B158DRAFT_0262at 268.679 kb on + strand, within B158DRAFT_0262at 268.705 kb on + strand, within B158DRAFT_0262at 268.710 kb on + strand, within B158DRAFT_0262at 268.713 kb on - strand, within B158DRAFT_0262at 268.713 kb on - strand, within B158DRAFT_0262at 268.713 kb on - strand, within B158DRAFT_0262at 268.713 kb on - strand, within B158DRAFT_0262at 268.713 kb on - strand, within B158DRAFT_0262at 268.713 kb on - strand, within B158DRAFT_0262at 268.804 kb on - strand, within B158DRAFT_0262at 268.829 kb on + strand, within B158DRAFT_0262at 268.887 kb on + strand, within B158DRAFT_0262at 268.887 kb on + strand, within B158DRAFT_0262at 268.918 kb on + strand, within B158DRAFT_0262at 268.918 kb on + strand, within B158DRAFT_0262at 268.918 kb on + strand, within B158DRAFT_0262at 268.926 kb on - strand, within B158DRAFT_0262at 268.926 kb on - strand, within B158DRAFT_0262at 268.926 kb on - strand, within B158DRAFT_0262at 269.017 kb on + strand, within B158DRAFT_0262at 269.022 kb on + strand, within B158DRAFT_0262at 269.030 kb on - strand, within B158DRAFT_0262at 269.030 kb on - strand, within B158DRAFT_0262at 269.035 kb on - strand, within B158DRAFT_0262at 269.187 kb on + strandat 269.187 kb on + strandat 269.325 kb on - strand, within B158DRAFT_0263at 269.430 kb on - strand, within B158DRAFT_0263at 269.528 kb on - strand, within B158DRAFT_0263at 269.619 kb on + strandat 269.629 kb on + strandat 269.636 kb on - strandat 269.636 kb on - strandat 269.637 kb on - strandat 269.637 kb on - strandat 269.723 kb on - strandat 269.791 kb on - strandat 269.801 kb on + strandat 270.028 kb on - strand, within B158DRAFT_0264at 270.030 kb on + strand, within B158DRAFT_0264at 270.030 kb on + strand, within B158DRAFT_0264at 270.038 kb on - strand, within B158DRAFT_0264

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml
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267,554 + B158DRAFT_0261 0.72 -0.9
267,683 + B158DRAFT_0261 0.78 -1.8
267,691 - B158DRAFT_0261 0.78 -0.7
267,691 - B158DRAFT_0261 0.78 +0.1
267,703 + B158DRAFT_0261 0.79 +0.5
267,711 - B158DRAFT_0261 0.79 +1.9
267,729 + B158DRAFT_0261 0.80 -2.0
267,737 - B158DRAFT_0261 0.80 -0.7
267,737 - B158DRAFT_0261 0.80 -0.5
267,737 - B158DRAFT_0261 0.80 -0.0
267,737 - B158DRAFT_0261 0.80 +0.4
267,756 + B158DRAFT_0261 0.81 -0.1
267,785 - B158DRAFT_0261 0.82 -1.9
267,787 + B158DRAFT_0261 0.82 +0.0
267,797 + B158DRAFT_0261 0.83 -1.5
267,802 + B158DRAFT_0261 0.83 -1.8
267,854 + B158DRAFT_0261 0.85 -0.5
267,854 + B158DRAFT_0261 0.85 +2.5
267,900 + B158DRAFT_0261 0.87 -2.0
267,924 - B158DRAFT_0261 0.88 -1.6
267,924 - B158DRAFT_0261 0.88 -1.3
267,987 - +2.3
267,988 + -1.0
267,988 + -1.0
267,997 - -0.7
268,020 + +0.2
268,028 - -0.7
268,028 - -0.9
268,038 + -1.8
268,088 + -1.0
268,135 + -1.1
268,331 + +0.3
268,331 + +0.0
268,331 + +0.5
268,339 - -2.6
268,358 + -0.0
268,358 + -0.2
268,364 + -0.3
268,371 - -0.9
268,456 + +1.4
268,466 + -2.5
268,469 - +1.8
268,469 - -0.9
268,474 - -1.1
268,474 - +0.4
268,507 + +1.0
268,536 - +0.4
268,614 + B158DRAFT_0262 0.12 -0.1
268,615 - B158DRAFT_0262 0.12 -0.8
268,615 - B158DRAFT_0262 0.12 -1.0
268,622 - B158DRAFT_0262 0.13 -1.2
268,632 - B158DRAFT_0262 0.15 +0.2
268,646 + B158DRAFT_0262 0.17 -1.3
268,646 + B158DRAFT_0262 0.17 -0.4
268,679 + B158DRAFT_0262 0.22 -0.6
268,705 + B158DRAFT_0262 0.27 -0.4
268,710 + B158DRAFT_0262 0.27 +1.0
268,713 - B158DRAFT_0262 0.28 -0.8
268,713 - B158DRAFT_0262 0.28 +0.9
268,713 - B158DRAFT_0262 0.28 +0.6
268,713 - B158DRAFT_0262 0.28 -0.2
268,713 - B158DRAFT_0262 0.28 -0.4
268,713 - B158DRAFT_0262 0.28 -0.4
268,804 - B158DRAFT_0262 0.43 +1.4
268,829 + B158DRAFT_0262 0.47 -0.1
268,887 + B158DRAFT_0262 0.57 -0.4
268,887 + B158DRAFT_0262 0.57 +0.6
268,918 + B158DRAFT_0262 0.62 -2.0
268,918 + B158DRAFT_0262 0.62 -2.0
268,918 + B158DRAFT_0262 0.62 -0.5
268,926 - B158DRAFT_0262 0.63 -0.3
268,926 - B158DRAFT_0262 0.63 +0.4
268,926 - B158DRAFT_0262 0.63 +1.0
269,017 + B158DRAFT_0262 0.78 -0.8
269,022 + B158DRAFT_0262 0.79 -1.1
269,030 - B158DRAFT_0262 0.80 -1.9
269,030 - B158DRAFT_0262 0.80 +1.2
269,035 - B158DRAFT_0262 0.81 +0.4
269,187 + +0.2
269,187 + -1.0
269,325 - B158DRAFT_0263 0.19 +0.5
269,430 - B158DRAFT_0263 0.46 -1.0
269,528 - B158DRAFT_0263 0.70 -0.8
269,619 + -0.5
269,629 + -3.1
269,636 - +1.0
269,636 - -0.3
269,637 - +0.8
269,637 - +1.4
269,723 - -0.1
269,791 - +0.5
269,801 + +1.0
270,028 - B158DRAFT_0264 0.40 -0.2
270,030 + B158DRAFT_0264 0.40 +0.4
270,030 + B158DRAFT_0264 0.40 -1.3
270,038 - B158DRAFT_0264 0.41 +0.2

Or see this region's nucleotide sequence