Experiment: m.b. Fusidic 0.00049 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0183 and B158DRAFT_0184 are separated by 20 nucleotides B158DRAFT_0184 and B158DRAFT_0185 are separated by 14 nucleotides B158DRAFT_0185 and B158DRAFT_0186 are separated by 42 nucleotides B158DRAFT_0186 and B158DRAFT_0187 are separated by 6 nucleotides B158DRAFT_0187 and B158DRAFT_0188 are separated by 36 nucleotides
B158DRAFT_0183: B158DRAFT_0183 - Chemotaxis protein histidine kinase and related kinases, at 183,029 to 189,703
_0183
B158DRAFT_0184: B158DRAFT_0184 - Methylase of chemotaxis methyl-accepting proteins, at 189,724 to 190,599
_0184
B158DRAFT_0185: B158DRAFT_0185 - Methyl-accepting chemotaxis protein, at 190,614 to 192,956
_0185
B158DRAFT_0186: B158DRAFT_0186 - Chemotaxis signal transduction protein, at 192,999 to 193,547
_0186
B158DRAFT_0187: B158DRAFT_0187 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 193,554 to 193,919
_0187
B158DRAFT_0188: B158DRAFT_0188 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 193,956 to 194,354
_0188
Position (kb) 190
191
192
193 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 189.724 kb on + strand at 189.773 kb on + strand at 190.164 kb on - strand, within B158DRAFT_0184 at 190.205 kb on + strand, within B158DRAFT_0184 at 190.205 kb on + strand, within B158DRAFT_0184 at 190.205 kb on + strand, within B158DRAFT_0184 at 190.205 kb on + strand, within B158DRAFT_0184 at 190.213 kb on - strand, within B158DRAFT_0184 at 190.213 kb on - strand, within B158DRAFT_0184 at 190.213 kb on - strand, within B158DRAFT_0184 at 190.213 kb on - strand, within B158DRAFT_0184 at 190.251 kb on - strand, within B158DRAFT_0184 at 190.452 kb on + strand, within B158DRAFT_0184 at 190.452 kb on - strand, within B158DRAFT_0184 at 190.820 kb on - strand at 190.874 kb on + strand, within B158DRAFT_0185 at 190.935 kb on + strand, within B158DRAFT_0185 at 191.002 kb on - strand, within B158DRAFT_0185 at 191.056 kb on + strand, within B158DRAFT_0185 at 191.341 kb on + strand, within B158DRAFT_0185 at 191.341 kb on + strand, within B158DRAFT_0185 at 191.577 kb on - strand, within B158DRAFT_0185 at 191.762 kb on + strand, within B158DRAFT_0185 at 191.762 kb on + strand, within B158DRAFT_0185 at 191.813 kb on - strand, within B158DRAFT_0185 at 191.935 kb on - strand, within B158DRAFT_0185 at 191.980 kb on - strand, within B158DRAFT_0185 at 191.980 kb on - strand, within B158DRAFT_0185 at 192.041 kb on - strand, within B158DRAFT_0185 at 192.093 kb on + strand, within B158DRAFT_0185 at 192.101 kb on - strand, within B158DRAFT_0185 at 192.135 kb on + strand, within B158DRAFT_0185 at 192.150 kb on - strand, within B158DRAFT_0185 at 192.196 kb on - strand, within B158DRAFT_0185 at 192.219 kb on + strand, within B158DRAFT_0185 at 192.219 kb on + strand, within B158DRAFT_0185 at 192.219 kb on + strand, within B158DRAFT_0185 at 192.227 kb on - strand, within B158DRAFT_0185 at 192.227 kb on - strand, within B158DRAFT_0185 at 192.269 kb on + strand, within B158DRAFT_0185 at 192.277 kb on + strand, within B158DRAFT_0185 at 192.304 kb on - strand, within B158DRAFT_0185 at 192.393 kb on - strand, within B158DRAFT_0185 at 192.548 kb on - strand, within B158DRAFT_0185 at 192.572 kb on - strand, within B158DRAFT_0185 at 192.608 kb on - strand, within B158DRAFT_0185 at 192.960 kb on - strand at 193.083 kb on + strand, within B158DRAFT_0186 at 193.085 kb on + strand, within B158DRAFT_0186 at 193.129 kb on + strand, within B158DRAFT_0186 at 193.129 kb on + strand, within B158DRAFT_0186 at 193.136 kb on - strand, within B158DRAFT_0186 at 193.137 kb on - strand, within B158DRAFT_0186 at 193.195 kb on - strand, within B158DRAFT_0186 at 193.195 kb on - strand, within B158DRAFT_0186 at 193.198 kb on + strand, within B158DRAFT_0186 at 193.206 kb on - strand, within B158DRAFT_0186 at 193.269 kb on - strand, within B158DRAFT_0186 at 193.316 kb on + strand, within B158DRAFT_0186 at 193.324 kb on - strand, within B158DRAFT_0186 at 193.431 kb on + strand, within B158DRAFT_0186 at 193.537 kb on + strand at 193.545 kb on + strand at 193.593 kb on + strand, within B158DRAFT_0187 at 193.786 kb on - strand, within B158DRAFT_0187 at 193.803 kb on + strand, within B158DRAFT_0187
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml remove 189,724 + -0.1 189,773 + +3.9 190,164 - B158DRAFT_0184 0.50 -1.7 190,205 + B158DRAFT_0184 0.55 +1.7 190,205 + B158DRAFT_0184 0.55 +1.2 190,205 + B158DRAFT_0184 0.55 +0.8 190,205 + B158DRAFT_0184 0.55 -0.9 190,213 - B158DRAFT_0184 0.56 -0.4 190,213 - B158DRAFT_0184 0.56 +1.7 190,213 - B158DRAFT_0184 0.56 -0.7 190,213 - B158DRAFT_0184 0.56 +0.8 190,251 - B158DRAFT_0184 0.60 +0.1 190,452 + B158DRAFT_0184 0.83 +1.6 190,452 - B158DRAFT_0184 0.83 -0.1 190,820 - +0.3 190,874 + B158DRAFT_0185 0.11 -1.6 190,935 + B158DRAFT_0185 0.14 +0.1 191,002 - B158DRAFT_0185 0.17 +0.4 191,056 + B158DRAFT_0185 0.19 +1.8 191,341 + B158DRAFT_0185 0.31 +1.1 191,341 + B158DRAFT_0185 0.31 +0.4 191,577 - B158DRAFT_0185 0.41 +0.8 191,762 + B158DRAFT_0185 0.49 +0.4 191,762 + B158DRAFT_0185 0.49 -0.2 191,813 - B158DRAFT_0185 0.51 +0.2 191,935 - B158DRAFT_0185 0.56 +0.5 191,980 - B158DRAFT_0185 0.58 -0.2 191,980 - B158DRAFT_0185 0.58 -0.3 192,041 - B158DRAFT_0185 0.61 -2.3 192,093 + B158DRAFT_0185 0.63 -2.1 192,101 - B158DRAFT_0185 0.63 -0.3 192,135 + B158DRAFT_0185 0.65 +0.2 192,150 - B158DRAFT_0185 0.66 +2.2 192,196 - B158DRAFT_0185 0.68 -1.2 192,219 + B158DRAFT_0185 0.69 +1.4 192,219 + B158DRAFT_0185 0.69 -1.7 192,219 + B158DRAFT_0185 0.69 -0.2 192,227 - B158DRAFT_0185 0.69 +0.3 192,227 - B158DRAFT_0185 0.69 +0.6 192,269 + B158DRAFT_0185 0.71 +2.9 192,277 + B158DRAFT_0185 0.71 +0.6 192,304 - B158DRAFT_0185 0.72 +0.8 192,393 - B158DRAFT_0185 0.76 +1.3 192,548 - B158DRAFT_0185 0.83 -1.7 192,572 - B158DRAFT_0185 0.84 -0.8 192,608 - B158DRAFT_0185 0.85 -0.4 192,960 - +0.1 193,083 + B158DRAFT_0186 0.15 +0.2 193,085 + B158DRAFT_0186 0.16 -0.6 193,129 + B158DRAFT_0186 0.24 +2.9 193,129 + B158DRAFT_0186 0.24 +0.8 193,136 - B158DRAFT_0186 0.25 +2.4 193,137 - B158DRAFT_0186 0.25 +3.7 193,195 - B158DRAFT_0186 0.36 +0.3 193,195 - B158DRAFT_0186 0.36 +0.2 193,198 + B158DRAFT_0186 0.36 -0.3 193,206 - B158DRAFT_0186 0.38 +0.5 193,269 - B158DRAFT_0186 0.49 -0.3 193,316 + B158DRAFT_0186 0.58 +0.9 193,324 - B158DRAFT_0186 0.59 +0.8 193,431 + B158DRAFT_0186 0.79 +0.8 193,537 + +0.7 193,545 + -0.3 193,593 + B158DRAFT_0187 0.11 -0.0 193,786 - B158DRAFT_0187 0.63 +0.2 193,803 + B158DRAFT_0187 0.68 +1.3
Or see this region's nucleotide sequence