Experiment: m.b. Fusidic 0.00049 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0131 and B158DRAFT_0132 are separated by 60 nucleotides B158DRAFT_0132 and B158DRAFT_0133 are separated by 62 nucleotides B158DRAFT_0133 and B158DRAFT_0134 are separated by 70 nucleotides
B158DRAFT_0131: B158DRAFT_0131 - Predicted hydrolase of the alpha/beta-hydrolase fold, at 129,284 to 130,291
_0131
B158DRAFT_0132: B158DRAFT_0132 - hypothetical protein, at 130,352 to 131,191
_0132
B158DRAFT_0133: B158DRAFT_0133 - Uncharacterized iron-regulated protein, at 131,254 to 131,937
_0133
B158DRAFT_0134: B158DRAFT_0134 - Heme/copper-type cytochrome/quinol oxidase, subunit 3, at 132,008 to 132,880
_0134
Position (kb) 130
131
132 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 129.566 kb on + strand, within B158DRAFT_0131 at 129.566 kb on + strand, within B158DRAFT_0131 at 129.566 kb on + strand, within B158DRAFT_0131 at 129.574 kb on - strand, within B158DRAFT_0131 at 129.642 kb on + strand, within B158DRAFT_0131 at 129.650 kb on - strand, within B158DRAFT_0131 at 129.664 kb on + strand, within B158DRAFT_0131 at 129.808 kb on - strand, within B158DRAFT_0131 at 129.845 kb on - strand, within B158DRAFT_0131 at 129.966 kb on + strand, within B158DRAFT_0131 at 130.032 kb on - strand, within B158DRAFT_0131 at 130.114 kb on - strand, within B158DRAFT_0131 at 130.120 kb on - strand, within B158DRAFT_0131 at 130.120 kb on - strand, within B158DRAFT_0131 at 130.157 kb on + strand, within B158DRAFT_0131 at 130.298 kb on + strand at 130.392 kb on + strand at 130.392 kb on + strand at 130.400 kb on - strand at 130.402 kb on - strand at 130.440 kb on - strand, within B158DRAFT_0132 at 130.451 kb on - strand, within B158DRAFT_0132 at 130.473 kb on + strand, within B158DRAFT_0132 at 130.569 kb on + strand, within B158DRAFT_0132 at 130.577 kb on + strand, within B158DRAFT_0132 at 130.577 kb on - strand, within B158DRAFT_0132 at 130.658 kb on + strand, within B158DRAFT_0132 at 130.666 kb on - strand, within B158DRAFT_0132 at 130.666 kb on - strand, within B158DRAFT_0132 at 130.666 kb on - strand, within B158DRAFT_0132 at 130.826 kb on - strand, within B158DRAFT_0132 at 130.875 kb on + strand, within B158DRAFT_0132 at 130.883 kb on - strand, within B158DRAFT_0132 at 130.883 kb on - strand, within B158DRAFT_0132 at 130.896 kb on - strand, within B158DRAFT_0132 at 130.910 kb on + strand, within B158DRAFT_0132 at 130.917 kb on - strand, within B158DRAFT_0132 at 130.951 kb on + strand, within B158DRAFT_0132 at 130.959 kb on - strand, within B158DRAFT_0132 at 130.959 kb on - strand, within B158DRAFT_0132 at 130.959 kb on - strand, within B158DRAFT_0132 at 130.965 kb on + strand, within B158DRAFT_0132 at 131.021 kb on + strand, within B158DRAFT_0132 at 131.021 kb on + strand, within B158DRAFT_0132 at 131.029 kb on - strand, within B158DRAFT_0132 at 131.029 kb on - strand, within B158DRAFT_0132 at 131.029 kb on - strand, within B158DRAFT_0132 at 131.036 kb on + strand, within B158DRAFT_0132 at 131.041 kb on + strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.054 kb on - strand, within B158DRAFT_0132 at 131.056 kb on + strand, within B158DRAFT_0132 at 131.056 kb on + strand, within B158DRAFT_0132 at 131.056 kb on + strand, within B158DRAFT_0132 at 131.087 kb on + strand, within B158DRAFT_0132 at 131.152 kb on - strand at 131.154 kb on + strand at 131.164 kb on - strand at 131.201 kb on - strand at 131.318 kb on + strand at 131.318 kb on + strand at 131.326 kb on - strand, within B158DRAFT_0133 at 131.328 kb on + strand, within B158DRAFT_0133 at 131.375 kb on + strand, within B158DRAFT_0133 at 131.377 kb on + strand, within B158DRAFT_0133 at 131.377 kb on + strand, within B158DRAFT_0133 at 131.377 kb on + strand, within B158DRAFT_0133 at 131.377 kb on + strand, within B158DRAFT_0133 at 131.383 kb on - strand, within B158DRAFT_0133 at 131.383 kb on - strand, within B158DRAFT_0133 at 131.385 kb on - strand, within B158DRAFT_0133 at 131.385 kb on - strand, within B158DRAFT_0133 at 131.391 kb on - strand, within B158DRAFT_0133 at 131.419 kb on + strand, within B158DRAFT_0133 at 131.443 kb on + strand, within B158DRAFT_0133 at 131.519 kb on + strand, within B158DRAFT_0133 at 131.626 kb on - strand, within B158DRAFT_0133 at 131.634 kb on - strand, within B158DRAFT_0133 at 131.634 kb on - strand, within B158DRAFT_0133 at 131.663 kb on - strand, within B158DRAFT_0133 at 131.694 kb on + strand, within B158DRAFT_0133 at 131.712 kb on + strand, within B158DRAFT_0133 at 131.841 kb on + strand, within B158DRAFT_0133 at 131.849 kb on - strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.891 kb on - strand at 131.940 kb on - strand at 131.940 kb on - strand at 132.014 kb on - strand at 132.034 kb on + strand at 132.039 kb on + strand at 132.139 kb on - strand, within B158DRAFT_0134
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml remove 129,566 + B158DRAFT_0131 0.28 -1.6 129,566 + B158DRAFT_0131 0.28 -1.9 129,566 + B158DRAFT_0131 0.28 -0.1 129,574 - B158DRAFT_0131 0.29 -0.6 129,642 + B158DRAFT_0131 0.36 -0.9 129,650 - B158DRAFT_0131 0.36 -1.4 129,664 + B158DRAFT_0131 0.38 +0.3 129,808 - B158DRAFT_0131 0.52 -1.3 129,845 - B158DRAFT_0131 0.56 -1.5 129,966 + B158DRAFT_0131 0.68 -0.6 130,032 - B158DRAFT_0131 0.74 -0.5 130,114 - B158DRAFT_0131 0.82 -2.1 130,120 - B158DRAFT_0131 0.83 -0.6 130,120 - B158DRAFT_0131 0.83 -1.2 130,157 + B158DRAFT_0131 0.87 -3.4 130,298 + -1.0 130,392 + -0.4 130,392 + -0.8 130,400 - -2.5 130,402 - -0.5 130,440 - B158DRAFT_0132 0.10 -0.9 130,451 - B158DRAFT_0132 0.12 -1.3 130,473 + B158DRAFT_0132 0.14 -0.1 130,569 + B158DRAFT_0132 0.26 -2.5 130,577 + B158DRAFT_0132 0.27 -0.9 130,577 - B158DRAFT_0132 0.27 +0.6 130,658 + B158DRAFT_0132 0.36 +0.8 130,666 - B158DRAFT_0132 0.37 +0.5 130,666 - B158DRAFT_0132 0.37 -2.0 130,666 - B158DRAFT_0132 0.37 -0.3 130,826 - B158DRAFT_0132 0.56 +0.3 130,875 + B158DRAFT_0132 0.62 -0.7 130,883 - B158DRAFT_0132 0.63 -1.3 130,883 - B158DRAFT_0132 0.63 -0.1 130,896 - B158DRAFT_0132 0.65 -0.8 130,910 + B158DRAFT_0132 0.66 -1.2 130,917 - B158DRAFT_0132 0.67 -0.8 130,951 + B158DRAFT_0132 0.71 +0.1 130,959 - B158DRAFT_0132 0.72 -0.4 130,959 - B158DRAFT_0132 0.72 +0.5 130,959 - B158DRAFT_0132 0.72 -0.9 130,965 + B158DRAFT_0132 0.73 +1.7 131,021 + B158DRAFT_0132 0.80 -0.4 131,021 + B158DRAFT_0132 0.80 -0.7 131,029 - B158DRAFT_0132 0.81 -0.9 131,029 - B158DRAFT_0132 0.81 -0.3 131,029 - B158DRAFT_0132 0.81 +0.1 131,036 + B158DRAFT_0132 0.81 -0.1 131,041 + B158DRAFT_0132 0.82 -1.5 131,049 - B158DRAFT_0132 0.83 -0.6 131,049 - B158DRAFT_0132 0.83 +0.4 131,049 - B158DRAFT_0132 0.83 -1.2 131,049 - B158DRAFT_0132 0.83 +3.3 131,049 - B158DRAFT_0132 0.83 -1.3 131,049 - B158DRAFT_0132 0.83 +1.4 131,054 - B158DRAFT_0132 0.84 -0.4 131,056 + B158DRAFT_0132 0.84 -0.9 131,056 + B158DRAFT_0132 0.84 -0.6 131,056 + B158DRAFT_0132 0.84 -0.1 131,087 + B158DRAFT_0132 0.88 +0.9 131,152 - -1.5 131,154 + +1.4 131,164 - -1.0 131,201 - -0.9 131,318 + -0.4 131,318 + -0.0 131,326 - B158DRAFT_0133 0.11 -0.3 131,328 + B158DRAFT_0133 0.11 +1.9 131,375 + B158DRAFT_0133 0.18 -0.4 131,377 + B158DRAFT_0133 0.18 -0.3 131,377 + B158DRAFT_0133 0.18 -1.4 131,377 + B158DRAFT_0133 0.18 -0.1 131,377 + B158DRAFT_0133 0.18 +1.0 131,383 - B158DRAFT_0133 0.19 -1.2 131,383 - B158DRAFT_0133 0.19 -0.9 131,385 - B158DRAFT_0133 0.19 -2.4 131,385 - B158DRAFT_0133 0.19 -1.6 131,391 - B158DRAFT_0133 0.20 +1.4 131,419 + B158DRAFT_0133 0.24 -1.1 131,443 + B158DRAFT_0133 0.28 -1.1 131,519 + B158DRAFT_0133 0.39 -1.2 131,626 - B158DRAFT_0133 0.54 +0.4 131,634 - B158DRAFT_0133 0.56 -2.3 131,634 - B158DRAFT_0133 0.56 -2.4 131,663 - B158DRAFT_0133 0.60 -0.4 131,694 + B158DRAFT_0133 0.64 -0.1 131,712 + B158DRAFT_0133 0.67 -2.0 131,841 + B158DRAFT_0133 0.86 +1.4 131,849 - B158DRAFT_0133 0.87 +3.1 131,868 + B158DRAFT_0133 0.90 -0.1 131,868 + B158DRAFT_0133 0.90 -1.0 131,868 + B158DRAFT_0133 0.90 +0.3 131,868 + B158DRAFT_0133 0.90 -0.6 131,868 + B158DRAFT_0133 0.90 +0.6 131,868 + B158DRAFT_0133 0.90 -0.9 131,868 + B158DRAFT_0133 0.90 -0.0 131,868 + B158DRAFT_0133 0.90 -0.7 131,868 + B158DRAFT_0133 0.90 -1.4 131,868 + B158DRAFT_0133 0.90 -1.2 131,868 + B158DRAFT_0133 0.90 -1.0 131,868 + B158DRAFT_0133 0.90 -1.5 131,868 + B158DRAFT_0133 0.90 -1.1 131,868 + B158DRAFT_0133 0.90 +1.7 131,868 + B158DRAFT_0133 0.90 +1.3 131,868 + B158DRAFT_0133 0.90 -0.8 131,868 + B158DRAFT_0133 0.90 +0.9 131,868 + B158DRAFT_0133 0.90 -0.8 131,868 + B158DRAFT_0133 0.90 +1.9 131,868 + B158DRAFT_0133 0.90 +0.1 131,868 + B158DRAFT_0133 0.90 +0.4 131,868 + B158DRAFT_0133 0.90 -0.3 131,876 - -0.1 131,876 - -1.6 131,876 - -1.2 131,876 - -0.1 131,876 - +1.4 131,876 - +1.6 131,876 - -2.1 131,876 - -0.3 131,876 - +0.4 131,876 - -0.3 131,876 - +2.4 131,876 - -0.7 131,876 - -1.2 131,876 - -0.2 131,876 - +0.3 131,891 - +0.7 131,940 - +0.3 131,940 - +0.3 132,014 - +0.6 132,034 + -0.2 132,039 + -0.6 132,139 - B158DRAFT_0134 0.15 +0.0
Or see this region's nucleotide sequence