Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2526

Experiment: m.b. Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2525 and B158DRAFT_2526 are separated by 94 nucleotidesB158DRAFT_2526 and B158DRAFT_2527 are separated by 136 nucleotides B158DRAFT_2525: B158DRAFT_2525 - Predicted Rossmann fold nucleotide-binding protein, at 713,840 to 715,228 _2525 B158DRAFT_2526: B158DRAFT_2526 - Tfp pilus assembly protein FimT, at 715,323 to 715,874 _2526 B158DRAFT_2527: B158DRAFT_2527 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 716,011 to 717,339 _2527 Position (kb) 715 716Strain fitness (log2 ratio) -2 -1 0 1at 714.339 kb on - strand, within B158DRAFT_2525at 714.339 kb on - strand, within B158DRAFT_2525at 714.398 kb on + strand, within B158DRAFT_2525at 714.430 kb on - strand, within B158DRAFT_2525at 714.430 kb on - strand, within B158DRAFT_2525at 714.449 kb on + strand, within B158DRAFT_2525at 714.449 kb on + strand, within B158DRAFT_2525at 714.449 kb on + strand, within B158DRAFT_2525at 714.449 kb on + strand, within B158DRAFT_2525at 714.449 kb on + strand, within B158DRAFT_2525at 714.449 kb on + strand, within B158DRAFT_2525at 714.457 kb on - strand, within B158DRAFT_2525at 714.457 kb on - strand, within B158DRAFT_2525at 714.463 kb on + strand, within B158DRAFT_2525at 714.463 kb on + strand, within B158DRAFT_2525at 714.523 kb on + strand, within B158DRAFT_2525at 714.554 kb on - strand, within B158DRAFT_2525at 714.564 kb on - strand, within B158DRAFT_2525at 714.577 kb on - strand, within B158DRAFT_2525at 714.578 kb on - strand, within B158DRAFT_2525at 714.583 kb on - strand, within B158DRAFT_2525at 714.583 kb on - strand, within B158DRAFT_2525at 714.605 kb on + strand, within B158DRAFT_2525at 714.613 kb on - strand, within B158DRAFT_2525at 714.676 kb on + strand, within B158DRAFT_2525at 714.677 kb on - strand, within B158DRAFT_2525at 714.684 kb on - strand, within B158DRAFT_2525at 714.684 kb on - strand, within B158DRAFT_2525at 714.684 kb on - strand, within B158DRAFT_2525at 714.684 kb on - strand, within B158DRAFT_2525at 714.706 kb on + strand, within B158DRAFT_2525at 714.711 kb on + strand, within B158DRAFT_2525at 714.887 kb on + strand, within B158DRAFT_2525at 714.905 kb on - strand, within B158DRAFT_2525at 714.910 kb on - strand, within B158DRAFT_2525at 714.948 kb on + strand, within B158DRAFT_2525at 715.130 kb on - strandat 715.156 kb on + strandat 715.164 kb on - strandat 715.217 kb on - strandat 715.408 kb on + strand, within B158DRAFT_2526at 715.416 kb on - strand, within B158DRAFT_2526at 715.426 kb on - strand, within B158DRAFT_2526at 715.537 kb on - strand, within B158DRAFT_2526at 715.612 kb on - strand, within B158DRAFT_2526at 715.896 kb on - strandat 715.936 kb on - strandat 716.183 kb on + strand, within B158DRAFT_2527at 716.287 kb on - strand, within B158DRAFT_2527at 716.413 kb on + strand, within B158DRAFT_2527at 716.421 kb on - strand, within B158DRAFT_2527at 716.505 kb on - strand, within B158DRAFT_2527at 716.571 kb on + strand, within B158DRAFT_2527at 716.579 kb on - strand, within B158DRAFT_2527at 716.649 kb on - strand, within B158DRAFT_2527at 716.733 kb on - strand, within B158DRAFT_2527

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM
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714,339 - B158DRAFT_2525 0.36 -0.1
714,339 - B158DRAFT_2525 0.36 -0.7
714,398 + B158DRAFT_2525 0.40 -1.0
714,430 - B158DRAFT_2525 0.42 -1.6
714,430 - B158DRAFT_2525 0.42 -1.2
714,449 + B158DRAFT_2525 0.44 -0.2
714,449 + B158DRAFT_2525 0.44 -1.2
714,449 + B158DRAFT_2525 0.44 +0.1
714,449 + B158DRAFT_2525 0.44 -1.9
714,449 + B158DRAFT_2525 0.44 -1.9
714,449 + B158DRAFT_2525 0.44 -0.3
714,457 - B158DRAFT_2525 0.44 -0.4
714,457 - B158DRAFT_2525 0.44 -0.4
714,463 + B158DRAFT_2525 0.45 -0.3
714,463 + B158DRAFT_2525 0.45 -1.1
714,523 + B158DRAFT_2525 0.49 -1.4
714,554 - B158DRAFT_2525 0.51 +0.9
714,564 - B158DRAFT_2525 0.52 -0.1
714,577 - B158DRAFT_2525 0.53 -1.2
714,578 - B158DRAFT_2525 0.53 +0.5
714,583 - B158DRAFT_2525 0.53 -2.3
714,583 - B158DRAFT_2525 0.53 -0.3
714,605 + B158DRAFT_2525 0.55 +0.1
714,613 - B158DRAFT_2525 0.56 -0.4
714,676 + B158DRAFT_2525 0.60 -0.3
714,677 - B158DRAFT_2525 0.60 -0.1
714,684 - B158DRAFT_2525 0.61 +0.3
714,684 - B158DRAFT_2525 0.61 -0.3
714,684 - B158DRAFT_2525 0.61 +0.4
714,684 - B158DRAFT_2525 0.61 +0.0
714,706 + B158DRAFT_2525 0.62 -1.1
714,711 + B158DRAFT_2525 0.63 -1.2
714,887 + B158DRAFT_2525 0.75 -0.3
714,905 - B158DRAFT_2525 0.77 -0.8
714,910 - B158DRAFT_2525 0.77 -0.8
714,948 + B158DRAFT_2525 0.80 +1.0
715,130 - -0.5
715,156 + -0.2
715,164 - -0.2
715,217 - +0.2
715,408 + B158DRAFT_2526 0.15 +0.9
715,416 - B158DRAFT_2526 0.17 -1.1
715,426 - B158DRAFT_2526 0.19 -0.6
715,537 - B158DRAFT_2526 0.39 -0.3
715,612 - B158DRAFT_2526 0.52 -0.4
715,896 - -0.4
715,936 - +0.1
716,183 + B158DRAFT_2527 0.13 -0.7
716,287 - B158DRAFT_2527 0.21 -1.0
716,413 + B158DRAFT_2527 0.30 -0.0
716,421 - B158DRAFT_2527 0.31 +0.0
716,505 - B158DRAFT_2527 0.37 -1.0
716,571 + B158DRAFT_2527 0.42 -2.0
716,579 - B158DRAFT_2527 0.43 -0.9
716,649 - B158DRAFT_2527 0.48 -1.5
716,733 - B158DRAFT_2527 0.54 -1.0

Or see this region's nucleotide sequence