Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2180 and B158DRAFT_2181 are separated by 339 nucleotides B158DRAFT_2181 and B158DRAFT_2182 are separated by 149 nucleotides B158DRAFT_2182 and B158DRAFT_2183 are separated by 154 nucleotides
B158DRAFT_2180: B158DRAFT_2180 - RNA polymerase, sigma-24 subunit, RpoE, at 327,431 to 328,021
_2180
B158DRAFT_2181: B158DRAFT_2181 - Negative regulator of sigma E activity, at 328,361 to 329,041
_2181
B158DRAFT_2182: B158DRAFT_2182 - positive regulator of sigma(E), RseC/MucC, at 329,191 to 329,682
_2182
B158DRAFT_2183: B158DRAFT_2183 - periplasmic serine protease, Do/DeqQ family, at 329,837 to 331,138
_2183
Position (kb) 328
329
330 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 327.361 kb on - strand at 327.361 kb on - strand at 327.361 kb on - strand at 327.361 kb on - strand at 327.361 kb on - strand at 327.361 kb on - strand at 327.413 kb on - strand at 327.433 kb on + strand at 327.433 kb on - strand at 327.439 kb on + strand at 327.443 kb on + strand at 327.443 kb on + strand at 327.443 kb on + strand at 327.443 kb on + strand at 327.451 kb on - strand at 327.468 kb on - strand at 327.535 kb on - strand, within B158DRAFT_2180 at 327.553 kb on - strand, within B158DRAFT_2180 at 327.569 kb on - strand, within B158DRAFT_2180 at 327.595 kb on + strand, within B158DRAFT_2180 at 327.603 kb on - strand, within B158DRAFT_2180 at 327.665 kb on + strand, within B158DRAFT_2180 at 327.702 kb on + strand, within B158DRAFT_2180 at 327.708 kb on + strand, within B158DRAFT_2180 at 327.856 kb on + strand, within B158DRAFT_2180 at 327.917 kb on + strand, within B158DRAFT_2180 at 327.917 kb on + strand, within B158DRAFT_2180 at 327.917 kb on + strand, within B158DRAFT_2180 at 327.917 kb on + strand, within B158DRAFT_2180 at 327.925 kb on - strand, within B158DRAFT_2180 at 327.935 kb on + strand, within B158DRAFT_2180 at 327.935 kb on + strand, within B158DRAFT_2180 at 328.006 kb on + strand at 328.006 kb on + strand at 328.006 kb on + strand at 328.006 kb on + strand at 328.006 kb on + strand at 328.014 kb on - strand at 328.014 kb on - strand at 328.084 kb on + strand at 328.593 kb on + strand, within B158DRAFT_2181 at 328.629 kb on + strand, within B158DRAFT_2181 at 328.637 kb on - strand, within B158DRAFT_2181 at 328.637 kb on - strand, within B158DRAFT_2181 at 328.644 kb on + strand, within B158DRAFT_2181 at 328.644 kb on + strand, within B158DRAFT_2181 at 328.765 kb on + strand, within B158DRAFT_2181 at 328.947 kb on - strand, within B158DRAFT_2181 at 328.981 kb on + strand at 329.083 kb on + strand at 329.201 kb on + strand at 329.561 kb on + strand, within B158DRAFT_2182 at 329.596 kb on + strand, within B158DRAFT_2182 at 329.671 kb on + strand at 329.691 kb on - strand at 329.839 kb on - strand at 329.864 kb on + strand at 329.967 kb on - strand at 329.980 kb on + strand, within B158DRAFT_2183 at 329.988 kb on - strand, within B158DRAFT_2183 at 329.988 kb on - strand, within B158DRAFT_2183 at 329.988 kb on - strand, within B158DRAFT_2183 at 330.011 kb on - strand, within B158DRAFT_2183 at 330.016 kb on + strand, within B158DRAFT_2183 at 330.031 kb on - strand, within B158DRAFT_2183 at 330.031 kb on - strand, within B158DRAFT_2183 at 330.032 kb on - strand, within B158DRAFT_2183
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 327,361 - -0.7 327,361 - -0.7 327,361 - -1.6 327,361 - +0.4 327,361 - -0.1 327,361 - -0.6 327,413 - -0.5 327,433 + -0.5 327,433 - -0.1 327,439 + -0.5 327,443 + +0.3 327,443 + -0.1 327,443 + -2.1 327,443 + -1.0 327,451 - +1.0 327,468 - -0.2 327,535 - B158DRAFT_2180 0.18 -0.7 327,553 - B158DRAFT_2180 0.21 +1.1 327,569 - B158DRAFT_2180 0.23 -0.4 327,595 + B158DRAFT_2180 0.28 -0.2 327,603 - B158DRAFT_2180 0.29 -0.2 327,665 + B158DRAFT_2180 0.40 -0.8 327,702 + B158DRAFT_2180 0.46 +0.5 327,708 + B158DRAFT_2180 0.47 -1.2 327,856 + B158DRAFT_2180 0.72 -1.8 327,917 + B158DRAFT_2180 0.82 -1.3 327,917 + B158DRAFT_2180 0.82 -0.4 327,917 + B158DRAFT_2180 0.82 +0.5 327,917 + B158DRAFT_2180 0.82 -1.4 327,925 - B158DRAFT_2180 0.84 +0.6 327,935 + B158DRAFT_2180 0.85 +0.3 327,935 + B158DRAFT_2180 0.85 -2.7 328,006 + +0.0 328,006 + -1.9 328,006 + -0.3 328,006 + +0.4 328,006 + -0.1 328,014 - -0.6 328,014 - +0.1 328,084 + -2.2 328,593 + B158DRAFT_2181 0.34 -0.7 328,629 + B158DRAFT_2181 0.39 +0.8 328,637 - B158DRAFT_2181 0.41 -1.3 328,637 - B158DRAFT_2181 0.41 +0.9 328,644 + B158DRAFT_2181 0.42 -1.7 328,644 + B158DRAFT_2181 0.42 -0.5 328,765 + B158DRAFT_2181 0.59 -0.4 328,947 - B158DRAFT_2181 0.86 -1.4 328,981 + -0.7 329,083 + +0.4 329,201 + -0.8 329,561 + B158DRAFT_2182 0.75 +0.0 329,596 + B158DRAFT_2182 0.82 -0.1 329,671 + -0.1 329,691 - -0.1 329,839 - -0.9 329,864 + +3.8 329,967 - -0.9 329,980 + B158DRAFT_2183 0.11 -0.4 329,988 - B158DRAFT_2183 0.12 +2.2 329,988 - B158DRAFT_2183 0.12 -0.9 329,988 - B158DRAFT_2183 0.12 -0.4 330,011 - B158DRAFT_2183 0.13 -0.3 330,016 + B158DRAFT_2183 0.14 -0.8 330,031 - B158DRAFT_2183 0.15 -0.7 330,031 - B158DRAFT_2183 0.15 +0.7 330,032 - B158DRAFT_2183 0.15 -3.2
Or see this region's nucleotide sequence