Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2065

Experiment: m.b. Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2064 and B158DRAFT_2065 are separated by 310 nucleotidesB158DRAFT_2065 and B158DRAFT_2066 are separated by 145 nucleotidesB158DRAFT_2066 and B158DRAFT_2067 are separated by 3 nucleotides B158DRAFT_2064: B158DRAFT_2064 - [protein release factor]-glutamine N5-methyltransferase (EC 2.1.1.-), at 199,694 to 200,527 _2064 B158DRAFT_2065: B158DRAFT_2065 - cell shape determining protein, MreB/Mrl family, at 200,838 to 201,881 _2065 B158DRAFT_2066: B158DRAFT_2066 - rod shape-determining protein MreC, at 202,027 to 202,815 _2066 B158DRAFT_2067: B158DRAFT_2067 - rod shape-determining protein MreD, at 202,819 to 203,316 _2067 Position (kb) 200 201 202Strain fitness (log2 ratio) -2 -1 0 1 2at 199.899 kb on + strand, within B158DRAFT_2064at 199.965 kb on + strand, within B158DRAFT_2064at 199.973 kb on - strand, within B158DRAFT_2064at 200.075 kb on + strand, within B158DRAFT_2064at 200.083 kb on - strand, within B158DRAFT_2064at 200.092 kb on + strand, within B158DRAFT_2064at 200.092 kb on + strand, within B158DRAFT_2064at 200.100 kb on - strand, within B158DRAFT_2064at 200.103 kb on + strand, within B158DRAFT_2064at 200.110 kb on + strand, within B158DRAFT_2064at 200.110 kb on + strand, within B158DRAFT_2064at 200.110 kb on + strand, within B158DRAFT_2064at 200.118 kb on - strand, within B158DRAFT_2064at 200.118 kb on - strand, within B158DRAFT_2064at 200.118 kb on - strand, within B158DRAFT_2064at 200.118 kb on - strand, within B158DRAFT_2064at 200.118 kb on - strand, within B158DRAFT_2064at 200.122 kb on + strand, within B158DRAFT_2064at 200.130 kb on - strand, within B158DRAFT_2064at 200.155 kb on + strand, within B158DRAFT_2064at 200.155 kb on + strand, within B158DRAFT_2064at 200.195 kb on + strand, within B158DRAFT_2064at 200.195 kb on + strand, within B158DRAFT_2064at 200.217 kb on + strand, within B158DRAFT_2064at 200.244 kb on - strand, within B158DRAFT_2064at 200.256 kb on - strand, within B158DRAFT_2064at 200.299 kb on - strand, within B158DRAFT_2064at 200.329 kb on + strand, within B158DRAFT_2064at 200.337 kb on - strand, within B158DRAFT_2064at 200.415 kb on + strand, within B158DRAFT_2064at 200.415 kb on + strand, within B158DRAFT_2064at 200.415 kb on + strand, within B158DRAFT_2064at 200.420 kb on + strand, within B158DRAFT_2064at 200.423 kb on - strand, within B158DRAFT_2064at 200.423 kb on - strand, within B158DRAFT_2064at 200.423 kb on - strand, within B158DRAFT_2064at 200.423 kb on - strand, within B158DRAFT_2064at 200.423 kb on - strand, within B158DRAFT_2064at 200.425 kb on + strand, within B158DRAFT_2064at 200.460 kb on + strandat 200.460 kb on + strandat 200.478 kb on - strandat 200.478 kb on - strandat 200.485 kb on + strandat 200.495 kb on + strandat 200.495 kb on + strandat 200.495 kb on + strandat 200.495 kb on + strandat 200.503 kb on - strandat 200.503 kb on - strandat 200.503 kb on - strandat 200.540 kb on - strandat 202.749 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM
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199,899 + B158DRAFT_2064 0.25 +1.9
199,965 + B158DRAFT_2064 0.32 -1.6
199,973 - B158DRAFT_2064 0.33 +0.6
200,075 + B158DRAFT_2064 0.46 +0.8
200,083 - B158DRAFT_2064 0.47 +0.7
200,092 + B158DRAFT_2064 0.48 +0.3
200,092 + B158DRAFT_2064 0.48 +0.3
200,100 - B158DRAFT_2064 0.49 +1.9
200,103 + B158DRAFT_2064 0.49 -0.2
200,110 + B158DRAFT_2064 0.50 +1.0
200,110 + B158DRAFT_2064 0.50 +0.7
200,110 + B158DRAFT_2064 0.50 -0.6
200,118 - B158DRAFT_2064 0.51 +1.3
200,118 - B158DRAFT_2064 0.51 +0.7
200,118 - B158DRAFT_2064 0.51 +1.6
200,118 - B158DRAFT_2064 0.51 -0.9
200,118 - B158DRAFT_2064 0.51 +1.8
200,122 + B158DRAFT_2064 0.51 +0.2
200,130 - B158DRAFT_2064 0.52 -0.2
200,155 + B158DRAFT_2064 0.55 +0.0
200,155 + B158DRAFT_2064 0.55 +1.0
200,195 + B158DRAFT_2064 0.60 +1.0
200,195 + B158DRAFT_2064 0.60 +0.6
200,217 + B158DRAFT_2064 0.63 -2.7
200,244 - B158DRAFT_2064 0.66 -0.3
200,256 - B158DRAFT_2064 0.67 +0.6
200,299 - B158DRAFT_2064 0.73 +1.3
200,329 + B158DRAFT_2064 0.76 +1.7
200,337 - B158DRAFT_2064 0.77 +0.8
200,415 + B158DRAFT_2064 0.86 -1.4
200,415 + B158DRAFT_2064 0.86 +0.4
200,415 + B158DRAFT_2064 0.86 -1.7
200,420 + B158DRAFT_2064 0.87 +0.4
200,423 - B158DRAFT_2064 0.87 -1.9
200,423 - B158DRAFT_2064 0.87 +0.5
200,423 - B158DRAFT_2064 0.87 +0.6
200,423 - B158DRAFT_2064 0.87 +0.2
200,423 - B158DRAFT_2064 0.87 +1.5
200,425 + B158DRAFT_2064 0.88 +1.3
200,460 + -0.4
200,460 + -0.0
200,478 - +0.6
200,478 - -0.6
200,485 + -0.6
200,495 + +0.7
200,495 + -0.9
200,495 + +1.3
200,495 + -2.4
200,503 - -1.7
200,503 - +0.5
200,503 - +0.4
200,540 - -2.2
202,749 + +1.5

Or see this region's nucleotide sequence