Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2044

Experiment: m.b. Chloride 500 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_2043 and B158DRAFT_2044 are separated by 69 nucleotidesB158DRAFT_2044 and B158DRAFT_2045 are separated by 163 nucleotidesB158DRAFT_2045 and B158DRAFT_2046 are separated by 154 nucleotides B158DRAFT_2043: B158DRAFT_2043 - Protein of unknown function (DUF3592)., at 174,552 to 176,351 _2043 B158DRAFT_2044: B158DRAFT_2044 - Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily, at 176,421 to 178,340 _2044 B158DRAFT_2045: B158DRAFT_2045 - transcriptional regulator, LuxR family, at 178,504 to 179,004 _2045 B158DRAFT_2046: B158DRAFT_2046 - Zn-dependent alcohol dehydrogenases, at 179,159 to 180,205 _2046 Position (kb) 176 177 178 179Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 175.425 kb on + strand, within B158DRAFT_2043at 175.425 kb on - strand, within B158DRAFT_2043at 175.425 kb on - strand, within B158DRAFT_2043at 175.425 kb on - strand, within B158DRAFT_2043at 175.425 kb on - strand, within B158DRAFT_2043at 175.425 kb on - strand, within B158DRAFT_2043at 175.564 kb on + strand, within B158DRAFT_2043at 175.633 kb on + strand, within B158DRAFT_2043at 175.633 kb on + strand, within B158DRAFT_2043at 175.633 kb on + strand, within B158DRAFT_2043at 175.633 kb on + strand, within B158DRAFT_2043at 175.633 kb on + strand, within B158DRAFT_2043at 175.633 kb on - strand, within B158DRAFT_2043at 175.641 kb on - strand, within B158DRAFT_2043at 175.641 kb on - strand, within B158DRAFT_2043at 175.641 kb on - strand, within B158DRAFT_2043at 175.641 kb on - strand, within B158DRAFT_2043at 175.641 kb on - strand, within B158DRAFT_2043at 175.641 kb on - strand, within B158DRAFT_2043at 175.641 kb on - strand, within B158DRAFT_2043at 175.641 kb on - strand, within B158DRAFT_2043at 175.664 kb on + strand, within B158DRAFT_2043at 175.664 kb on + strand, within B158DRAFT_2043at 175.672 kb on - strand, within B158DRAFT_2043at 175.682 kb on + strand, within B158DRAFT_2043at 175.716 kb on - strand, within B158DRAFT_2043at 175.767 kb on - strand, within B158DRAFT_2043at 175.827 kb on + strand, within B158DRAFT_2043at 175.835 kb on - strand, within B158DRAFT_2043at 175.849 kb on - strand, within B158DRAFT_2043at 175.854 kb on - strand, within B158DRAFT_2043at 175.870 kb on + strand, within B158DRAFT_2043at 175.870 kb on + strand, within B158DRAFT_2043at 175.878 kb on - strand, within B158DRAFT_2043at 175.878 kb on - strand, within B158DRAFT_2043at 175.878 kb on - strand, within B158DRAFT_2043at 175.888 kb on - strand, within B158DRAFT_2043at 175.888 kb on - strand, within B158DRAFT_2043at 175.903 kb on - strand, within B158DRAFT_2043at 175.917 kb on + strand, within B158DRAFT_2043at 175.925 kb on - strand, within B158DRAFT_2043at 176.005 kb on - strand, within B158DRAFT_2043at 176.065 kb on + strand, within B158DRAFT_2043at 176.065 kb on + strand, within B158DRAFT_2043at 176.065 kb on + strand, within B158DRAFT_2043at 176.073 kb on - strand, within B158DRAFT_2043at 176.073 kb on - strand, within B158DRAFT_2043at 176.073 kb on - strand, within B158DRAFT_2043at 176.073 kb on - strand, within B158DRAFT_2043at 176.073 kb on - strand, within B158DRAFT_2043at 176.073 kb on - strand, within B158DRAFT_2043at 176.073 kb on - strand, within B158DRAFT_2043at 176.073 kb on - strand, within B158DRAFT_2043at 176.073 kb on - strand, within B158DRAFT_2043at 176.073 kb on - strand, within B158DRAFT_2043at 176.073 kb on - strand, within B158DRAFT_2043at 176.073 kb on - strand, within B158DRAFT_2043at 176.073 kb on - strand, within B158DRAFT_2043at 176.087 kb on + strand, within B158DRAFT_2043at 176.183 kb on - strandat 176.382 kb on + strandat 176.391 kb on - strandat 176.391 kb on - strandat 176.475 kb on + strandat 176.507 kb on + strandat 176.509 kb on + strandat 176.536 kb on + strandat 176.555 kb on - strandat 176.591 kb on + strandat 176.692 kb on - strand, within B158DRAFT_2044at 176.809 kb on + strand, within B158DRAFT_2044at 176.821 kb on + strand, within B158DRAFT_2044at 176.827 kb on + strand, within B158DRAFT_2044at 176.834 kb on - strand, within B158DRAFT_2044at 176.835 kb on - strand, within B158DRAFT_2044at 177.005 kb on + strand, within B158DRAFT_2044at 177.013 kb on - strand, within B158DRAFT_2044at 177.069 kb on + strand, within B158DRAFT_2044at 177.077 kb on - strand, within B158DRAFT_2044at 177.093 kb on - strand, within B158DRAFT_2044at 177.158 kb on + strand, within B158DRAFT_2044at 177.317 kb on + strand, within B158DRAFT_2044at 177.349 kb on - strand, within B158DRAFT_2044at 177.372 kb on + strand, within B158DRAFT_2044at 177.495 kb on - strand, within B158DRAFT_2044at 177.521 kb on + strand, within B158DRAFT_2044at 177.529 kb on - strand, within B158DRAFT_2044at 177.529 kb on - strand, within B158DRAFT_2044at 177.569 kb on + strand, within B158DRAFT_2044at 177.685 kb on + strand, within B158DRAFT_2044at 177.703 kb on + strand, within B158DRAFT_2044at 177.703 kb on + strand, within B158DRAFT_2044at 177.703 kb on + strand, within B158DRAFT_2044at 177.711 kb on - strand, within B158DRAFT_2044at 177.778 kb on + strand, within B158DRAFT_2044at 177.842 kb on + strand, within B158DRAFT_2044at 177.884 kb on - strand, within B158DRAFT_2044at 177.892 kb on + strand, within B158DRAFT_2044at 177.902 kb on + strand, within B158DRAFT_2044at 177.966 kb on + strand, within B158DRAFT_2044at 177.966 kb on + strand, within B158DRAFT_2044at 177.966 kb on + strand, within B158DRAFT_2044at 177.966 kb on + strand, within B158DRAFT_2044at 177.966 kb on + strand, within B158DRAFT_2044at 177.966 kb on + strand, within B158DRAFT_2044at 177.974 kb on - strand, within B158DRAFT_2044at 178.014 kb on + strand, within B158DRAFT_2044at 178.102 kb on + strand, within B158DRAFT_2044at 178.112 kb on + strand, within B158DRAFT_2044at 178.222 kb on + strandat 178.259 kb on + strandat 178.266 kb on - strandat 178.336 kb on + strandat 178.405 kb on + strandat 178.413 kb on - strandat 178.457 kb on - strandat 178.565 kb on + strand, within B158DRAFT_2045at 178.572 kb on + strand, within B158DRAFT_2045at 178.572 kb on + strand, within B158DRAFT_2045at 178.572 kb on + strand, within B158DRAFT_2045at 178.572 kb on + strand, within B158DRAFT_2045at 178.573 kb on - strand, within B158DRAFT_2045at 178.580 kb on - strand, within B158DRAFT_2045at 178.580 kb on - strand, within B158DRAFT_2045at 178.580 kb on - strand, within B158DRAFT_2045at 178.580 kb on - strand, within B158DRAFT_2045at 178.580 kb on - strand, within B158DRAFT_2045at 178.700 kb on - strand, within B158DRAFT_2045at 178.714 kb on + strand, within B158DRAFT_2045at 178.811 kb on + strand, within B158DRAFT_2045at 178.861 kb on + strand, within B158DRAFT_2045at 178.869 kb on - strand, within B158DRAFT_2045at 178.896 kb on - strand, within B158DRAFT_2045at 178.960 kb on + strandat 178.968 kb on - strandat 179.031 kb on + strandat 179.032 kb on + strandat 179.073 kb on - strandat 179.101 kb on + strandat 179.101 kb on + strandat 179.115 kb on + strandat 179.115 kb on + strandat 179.115 kb on + strandat 179.115 kb on + strandat 179.115 kb on + strandat 179.123 kb on - strandat 179.123 kb on - strandat 179.123 kb on - strandat 179.123 kb on - strandat 179.215 kb on - strandat 179.217 kb on - strandat 179.258 kb on + strandat 179.265 kb on + strand, within B158DRAFT_2046at 179.273 kb on - strand, within B158DRAFT_2046at 179.287 kb on + strand, within B158DRAFT_2046at 179.287 kb on + strand, within B158DRAFT_2046at 179.311 kb on + strand, within B158DRAFT_2046at 179.320 kb on + strand, within B158DRAFT_2046

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM
remove
175,425 + B158DRAFT_2043 0.48 -1.2
175,425 - B158DRAFT_2043 0.48 +0.9
175,425 - B158DRAFT_2043 0.48 +0.1
175,425 - B158DRAFT_2043 0.48 -0.1
175,425 - B158DRAFT_2043 0.48 -1.2
175,425 - B158DRAFT_2043 0.48 -1.3
175,564 + B158DRAFT_2043 0.56 -0.5
175,633 + B158DRAFT_2043 0.60 +0.6
175,633 + B158DRAFT_2043 0.60 -0.6
175,633 + B158DRAFT_2043 0.60 -2.1
175,633 + B158DRAFT_2043 0.60 +0.6
175,633 + B158DRAFT_2043 0.60 +0.5
175,633 - B158DRAFT_2043 0.60 -0.0
175,641 - B158DRAFT_2043 0.60 +0.5
175,641 - B158DRAFT_2043 0.60 +0.0
175,641 - B158DRAFT_2043 0.60 -2.3
175,641 - B158DRAFT_2043 0.60 +0.8
175,641 - B158DRAFT_2043 0.60 -1.7
175,641 - B158DRAFT_2043 0.60 -0.8
175,641 - B158DRAFT_2043 0.60 -0.5
175,641 - B158DRAFT_2043 0.60 -3.1
175,664 + B158DRAFT_2043 0.62 -1.1
175,664 + B158DRAFT_2043 0.62 -1.1
175,672 - B158DRAFT_2043 0.62 -1.7
175,682 + B158DRAFT_2043 0.63 +1.0
175,716 - B158DRAFT_2043 0.65 +0.5
175,767 - B158DRAFT_2043 0.68 +0.2
175,827 + B158DRAFT_2043 0.71 +0.1
175,835 - B158DRAFT_2043 0.71 +0.4
175,849 - B158DRAFT_2043 0.72 +2.3
175,854 - B158DRAFT_2043 0.72 -0.8
175,870 + B158DRAFT_2043 0.73 +0.1
175,870 + B158DRAFT_2043 0.73 -1.8
175,878 - B158DRAFT_2043 0.74 -0.8
175,878 - B158DRAFT_2043 0.74 -0.1
175,878 - B158DRAFT_2043 0.74 -0.8
175,888 - B158DRAFT_2043 0.74 +1.1
175,888 - B158DRAFT_2043 0.74 -0.2
175,903 - B158DRAFT_2043 0.75 -0.3
175,917 + B158DRAFT_2043 0.76 +1.7
175,925 - B158DRAFT_2043 0.76 -0.2
176,005 - B158DRAFT_2043 0.81 -0.1
176,065 + B158DRAFT_2043 0.84 -0.7
176,065 + B158DRAFT_2043 0.84 +0.2
176,065 + B158DRAFT_2043 0.84 +1.0
176,073 - B158DRAFT_2043 0.84 -1.1
176,073 - B158DRAFT_2043 0.84 +0.6
176,073 - B158DRAFT_2043 0.84 +0.5
176,073 - B158DRAFT_2043 0.84 -0.1
176,073 - B158DRAFT_2043 0.84 +0.1
176,073 - B158DRAFT_2043 0.84 -1.8
176,073 - B158DRAFT_2043 0.84 -0.7
176,073 - B158DRAFT_2043 0.84 +1.4
176,073 - B158DRAFT_2043 0.84 +0.4
176,073 - B158DRAFT_2043 0.84 -0.8
176,073 - B158DRAFT_2043 0.84 +0.0
176,073 - B158DRAFT_2043 0.84 -2.0
176,073 - B158DRAFT_2043 0.84 +1.8
176,087 + B158DRAFT_2043 0.85 -0.2
176,183 - +1.2
176,382 + -1.9
176,391 - +0.1
176,391 - -1.6
176,475 + -0.0
176,507 + +0.6
176,509 + -1.0
176,536 + +2.6
176,555 - +0.3
176,591 + +0.1
176,692 - B158DRAFT_2044 0.14 +1.4
176,809 + B158DRAFT_2044 0.20 -0.4
176,821 + B158DRAFT_2044 0.21 -0.1
176,827 + B158DRAFT_2044 0.21 -0.4
176,834 - B158DRAFT_2044 0.22 +0.2
176,835 - B158DRAFT_2044 0.22 -2.8
177,005 + B158DRAFT_2044 0.30 -0.0
177,013 - B158DRAFT_2044 0.31 -0.8
177,069 + B158DRAFT_2044 0.34 -0.2
177,077 - B158DRAFT_2044 0.34 -1.0
177,093 - B158DRAFT_2044 0.35 -0.1
177,158 + B158DRAFT_2044 0.38 +1.0
177,317 + B158DRAFT_2044 0.47 +0.6
177,349 - B158DRAFT_2044 0.48 -0.0
177,372 + B158DRAFT_2044 0.50 +0.5
177,495 - B158DRAFT_2044 0.56 -0.5
177,521 + B158DRAFT_2044 0.57 +0.7
177,529 - B158DRAFT_2044 0.58 -0.7
177,529 - B158DRAFT_2044 0.58 +2.7
177,569 + B158DRAFT_2044 0.60 -0.3
177,685 + B158DRAFT_2044 0.66 -0.0
177,703 + B158DRAFT_2044 0.67 -0.5
177,703 + B158DRAFT_2044 0.67 -0.7
177,703 + B158DRAFT_2044 0.67 +0.3
177,711 - B158DRAFT_2044 0.67 +0.0
177,778 + B158DRAFT_2044 0.71 -1.2
177,842 + B158DRAFT_2044 0.74 -0.2
177,884 - B158DRAFT_2044 0.76 -0.2
177,892 + B158DRAFT_2044 0.77 -0.1
177,902 + B158DRAFT_2044 0.77 -0.3
177,966 + B158DRAFT_2044 0.80 +1.4
177,966 + B158DRAFT_2044 0.80 -1.2
177,966 + B158DRAFT_2044 0.80 -0.9
177,966 + B158DRAFT_2044 0.80 -0.3
177,966 + B158DRAFT_2044 0.80 -1.8
177,966 + B158DRAFT_2044 0.80 -0.2
177,974 - B158DRAFT_2044 0.81 +1.8
178,014 + B158DRAFT_2044 0.83 +0.0
178,102 + B158DRAFT_2044 0.88 +0.0
178,112 + B158DRAFT_2044 0.88 -0.5
178,222 + -1.4
178,259 + -0.0
178,266 - -0.7
178,336 + -1.7
178,405 + +0.1
178,413 - -0.8
178,457 - +0.7
178,565 + B158DRAFT_2045 0.12 -1.8
178,572 + B158DRAFT_2045 0.14 -0.0
178,572 + B158DRAFT_2045 0.14 -0.8
178,572 + B158DRAFT_2045 0.14 -0.1
178,572 + B158DRAFT_2045 0.14 -0.9
178,573 - B158DRAFT_2045 0.14 +1.3
178,580 - B158DRAFT_2045 0.15 -0.2
178,580 - B158DRAFT_2045 0.15 +1.2
178,580 - B158DRAFT_2045 0.15 -1.1
178,580 - B158DRAFT_2045 0.15 +0.5
178,580 - B158DRAFT_2045 0.15 -1.0
178,700 - B158DRAFT_2045 0.39 -1.3
178,714 + B158DRAFT_2045 0.42 +1.0
178,811 + B158DRAFT_2045 0.61 +0.4
178,861 + B158DRAFT_2045 0.71 -1.8
178,869 - B158DRAFT_2045 0.73 +4.1
178,896 - B158DRAFT_2045 0.78 +0.4
178,960 + +0.3
178,968 - +0.7
179,031 + -0.5
179,032 + -1.4
179,073 - -0.5
179,101 + -1.7
179,101 + -0.4
179,115 + +0.1
179,115 + -1.1
179,115 + -0.8
179,115 + +0.2
179,115 + -1.2
179,123 - +1.5
179,123 - -0.5
179,123 - +0.0
179,123 - +0.3
179,215 - -0.4
179,217 - -0.2
179,258 + +0.6
179,265 + B158DRAFT_2046 0.10 -0.3
179,273 - B158DRAFT_2046 0.11 -0.5
179,287 + B158DRAFT_2046 0.12 +0.5
179,287 + B158DRAFT_2046 0.12 +0.1
179,311 + B158DRAFT_2046 0.15 -0.3
179,320 + B158DRAFT_2046 0.15 +0.1

Or see this region's nucleotide sequence