Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1739

Experiment: m.b. Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1737 and B158DRAFT_1738 overlap by 4 nucleotidesB158DRAFT_1738 and B158DRAFT_1739 overlap by 8 nucleotidesB158DRAFT_1739 and B158DRAFT_1740 are separated by 20 nucleotidesB158DRAFT_1740 and B158DRAFT_1741 are separated by 16 nucleotides B158DRAFT_1737: B158DRAFT_1737 - two component transcriptional regulator, LuxR family, at 1,814,727 to 1,815,365 _1737 B158DRAFT_1738: B158DRAFT_1738 - Histidine kinase/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, at 1,815,362 to 1,816,105 _1738 B158DRAFT_1739: B158DRAFT_1739 - Protein kinase domain., at 1,816,098 to 1,819,463 _1739 B158DRAFT_1740: B158DRAFT_1740 - FOG: FHA domain, at 1,819,484 to 1,820,380 _1740 B158DRAFT_1741: B158DRAFT_1741 - hypothetical protein, at 1,820,397 to 1,821,233 _1741 Position (kb) 1816 1817 1818 1819 1820Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1815.181 kb on + strand, within B158DRAFT_1737at 1815.204 kb on + strand, within B158DRAFT_1737at 1815.252 kb on + strand, within B158DRAFT_1737at 1815.283 kb on - strand, within B158DRAFT_1737at 1815.312 kb on + strandat 1815.312 kb on + strandat 1815.350 kb on + strandat 1815.384 kb on + strandat 1815.384 kb on + strandat 1815.385 kb on - strandat 1815.392 kb on - strandat 1815.419 kb on + strandat 1815.419 kb on + strandat 1815.427 kb on - strandat 1815.427 kb on - strandat 1815.427 kb on - strandat 1815.427 kb on - strandat 1815.427 kb on - strandat 1815.430 kb on + strandat 1815.430 kb on + strandat 1815.437 kb on - strand, within B158DRAFT_1738at 1815.455 kb on + strand, within B158DRAFT_1738at 1815.490 kb on + strand, within B158DRAFT_1738at 1815.498 kb on - strand, within B158DRAFT_1738at 1815.498 kb on - strand, within B158DRAFT_1738at 1815.498 kb on - strand, within B158DRAFT_1738at 1815.498 kb on - strand, within B158DRAFT_1738at 1815.498 kb on - strand, within B158DRAFT_1738at 1815.516 kb on - strand, within B158DRAFT_1738at 1815.523 kb on + strand, within B158DRAFT_1738at 1815.524 kb on + strand, within B158DRAFT_1738at 1815.537 kb on + strand, within B158DRAFT_1738at 1815.537 kb on + strand, within B158DRAFT_1738at 1815.545 kb on - strand, within B158DRAFT_1738at 1815.545 kb on - strand, within B158DRAFT_1738at 1815.581 kb on - strand, within B158DRAFT_1738at 1815.648 kb on + strand, within B158DRAFT_1738at 1815.703 kb on + strand, within B158DRAFT_1738at 1815.839 kb on - strand, within B158DRAFT_1738at 1815.851 kb on - strand, within B158DRAFT_1738at 1815.851 kb on - strand, within B158DRAFT_1738at 1815.867 kb on + strand, within B158DRAFT_1738at 1815.875 kb on - strand, within B158DRAFT_1738at 1815.926 kb on - strand, within B158DRAFT_1738at 1815.926 kb on - strand, within B158DRAFT_1738at 1815.936 kb on + strand, within B158DRAFT_1738at 1815.946 kb on - strand, within B158DRAFT_1738at 1815.992 kb on - strand, within B158DRAFT_1738at 1816.111 kb on + strandat 1816.353 kb on + strandat 1816.360 kb on - strandat 1816.509 kb on - strand, within B158DRAFT_1739at 1816.648 kb on - strand, within B158DRAFT_1739at 1816.700 kb on - strand, within B158DRAFT_1739at 1816.719 kb on - strand, within B158DRAFT_1739at 1816.895 kb on + strand, within B158DRAFT_1739at 1816.898 kb on + strand, within B158DRAFT_1739at 1816.898 kb on + strand, within B158DRAFT_1739at 1816.906 kb on - strand, within B158DRAFT_1739at 1816.906 kb on - strand, within B158DRAFT_1739at 1816.939 kb on - strand, within B158DRAFT_1739at 1817.067 kb on + strand, within B158DRAFT_1739at 1817.090 kb on + strand, within B158DRAFT_1739at 1817.113 kb on + strand, within B158DRAFT_1739at 1817.113 kb on + strand, within B158DRAFT_1739at 1817.121 kb on - strand, within B158DRAFT_1739at 1817.149 kb on + strand, within B158DRAFT_1739at 1817.199 kb on - strand, within B158DRAFT_1739at 1817.239 kb on + strand, within B158DRAFT_1739at 1817.267 kb on - strand, within B158DRAFT_1739at 1817.269 kb on - strand, within B158DRAFT_1739at 1817.318 kb on - strand, within B158DRAFT_1739at 1817.336 kb on + strand, within B158DRAFT_1739at 1817.355 kb on - strand, within B158DRAFT_1739at 1817.355 kb on - strand, within B158DRAFT_1739at 1817.385 kb on - strand, within B158DRAFT_1739at 1817.399 kb on + strand, within B158DRAFT_1739at 1817.407 kb on - strand, within B158DRAFT_1739at 1817.516 kb on - strand, within B158DRAFT_1739at 1817.516 kb on - strand, within B158DRAFT_1739at 1817.518 kb on - strand, within B158DRAFT_1739at 1817.579 kb on + strand, within B158DRAFT_1739at 1817.802 kb on + strand, within B158DRAFT_1739at 1817.807 kb on + strand, within B158DRAFT_1739at 1817.877 kb on + strand, within B158DRAFT_1739at 1817.885 kb on - strand, within B158DRAFT_1739at 1817.893 kb on + strand, within B158DRAFT_1739at 1818.030 kb on - strand, within B158DRAFT_1739at 1818.088 kb on - strand, within B158DRAFT_1739at 1818.113 kb on - strand, within B158DRAFT_1739at 1818.147 kb on - strand, within B158DRAFT_1739at 1818.147 kb on - strand, within B158DRAFT_1739at 1818.161 kb on - strand, within B158DRAFT_1739at 1818.189 kb on + strand, within B158DRAFT_1739at 1818.196 kb on + strand, within B158DRAFT_1739at 1818.205 kb on - strand, within B158DRAFT_1739at 1818.374 kb on - strand, within B158DRAFT_1739at 1818.388 kb on - strand, within B158DRAFT_1739at 1818.390 kb on + strand, within B158DRAFT_1739at 1818.398 kb on - strand, within B158DRAFT_1739at 1818.398 kb on - strand, within B158DRAFT_1739at 1818.400 kb on + strand, within B158DRAFT_1739at 1818.404 kb on + strand, within B158DRAFT_1739at 1818.404 kb on + strand, within B158DRAFT_1739at 1818.448 kb on - strand, within B158DRAFT_1739at 1818.576 kb on + strand, within B158DRAFT_1739at 1818.584 kb on - strand, within B158DRAFT_1739at 1818.696 kb on + strand, within B158DRAFT_1739at 1818.852 kb on + strand, within B158DRAFT_1739at 1818.852 kb on + strand, within B158DRAFT_1739at 1818.852 kb on + strand, within B158DRAFT_1739at 1818.860 kb on - strand, within B158DRAFT_1739at 1818.860 kb on - strand, within B158DRAFT_1739at 1819.010 kb on - strand, within B158DRAFT_1739at 1819.012 kb on + strand, within B158DRAFT_1739at 1819.022 kb on + strand, within B158DRAFT_1739at 1819.099 kb on - strand, within B158DRAFT_1739at 1819.106 kb on - strand, within B158DRAFT_1739at 1819.157 kb on - strandat 1819.220 kb on + strandat 1819.228 kb on - strandat 1819.308 kb on - strandat 1819.369 kb on - strandat 1819.419 kb on + strandat 1819.467 kb on + strandat 1819.468 kb on + strandat 1819.481 kb on - strandat 1819.489 kb on - strandat 1819.639 kb on - strand, within B158DRAFT_1740at 1819.677 kb on + strand, within B158DRAFT_1740at 1819.677 kb on + strand, within B158DRAFT_1740at 1819.677 kb on + strand, within B158DRAFT_1740at 1819.677 kb on + strand, within B158DRAFT_1740at 1819.677 kb on + strand, within B158DRAFT_1740at 1819.677 kb on + strand, within B158DRAFT_1740at 1819.682 kb on + strand, within B158DRAFT_1740at 1819.685 kb on - strand, within B158DRAFT_1740at 1819.685 kb on - strand, within B158DRAFT_1740at 1819.685 kb on - strand, within B158DRAFT_1740at 1819.685 kb on - strand, within B158DRAFT_1740at 1819.685 kb on - strand, within B158DRAFT_1740at 1819.685 kb on - strand, within B158DRAFT_1740at 1819.685 kb on - strand, within B158DRAFT_1740at 1819.685 kb on - strand, within B158DRAFT_1740at 1819.685 kb on - strand, within B158DRAFT_1740at 1819.724 kb on + strand, within B158DRAFT_1740at 1819.724 kb on + strand, within B158DRAFT_1740at 1819.724 kb on + strand, within B158DRAFT_1740at 1819.753 kb on - strand, within B158DRAFT_1740at 1819.755 kb on + strand, within B158DRAFT_1740at 1819.755 kb on + strand, within B158DRAFT_1740at 1819.755 kb on + strand, within B158DRAFT_1740at 1819.755 kb on + strand, within B158DRAFT_1740at 1819.763 kb on - strand, within B158DRAFT_1740at 1819.789 kb on + strand, within B158DRAFT_1740at 1819.875 kb on + strand, within B158DRAFT_1740at 1819.899 kb on - strand, within B158DRAFT_1740at 1819.899 kb on - strand, within B158DRAFT_1740at 1819.982 kb on + strand, within B158DRAFT_1740at 1820.000 kb on - strand, within B158DRAFT_1740at 1820.038 kb on + strand, within B158DRAFT_1740at 1820.046 kb on - strand, within B158DRAFT_1740at 1820.070 kb on - strand, within B158DRAFT_1740at 1820.126 kb on + strand, within B158DRAFT_1740at 1820.176 kb on + strand, within B158DRAFT_1740at 1820.186 kb on + strand, within B158DRAFT_1740at 1820.202 kb on + strand, within B158DRAFT_1740at 1820.218 kb on - strand, within B158DRAFT_1740at 1820.256 kb on - strand, within B158DRAFT_1740at 1820.278 kb on + strand, within B158DRAFT_1740at 1820.278 kb on + strand, within B158DRAFT_1740at 1820.278 kb on + strand, within B158DRAFT_1740at 1820.278 kb on + strand, within B158DRAFT_1740at 1820.278 kb on + strand, within B158DRAFT_1740at 1820.281 kb on - strand, within B158DRAFT_1740at 1820.286 kb on - strand, within B158DRAFT_1740at 1820.286 kb on - strand, within B158DRAFT_1740at 1820.286 kb on - strand, within B158DRAFT_1740at 1820.299 kb on - strandat 1820.352 kb on + strandat 1820.352 kb on + strandat 1820.355 kb on - strandat 1820.360 kb on - strandat 1820.360 kb on - strandat 1820.360 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM
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1,815,181 + B158DRAFT_1737 0.71 -0.0
1,815,204 + B158DRAFT_1737 0.75 -1.1
1,815,252 + B158DRAFT_1737 0.82 -0.5
1,815,283 - B158DRAFT_1737 0.87 +0.1
1,815,312 + -0.9
1,815,312 + -0.3
1,815,350 + +1.2
1,815,384 + -0.1
1,815,384 + -1.6
1,815,385 - -0.2
1,815,392 - -0.6
1,815,419 + +0.1
1,815,419 + -2.8
1,815,427 - +0.2
1,815,427 - -0.7
1,815,427 - -1.1
1,815,427 - -0.8
1,815,427 - +0.1
1,815,430 + +0.3
1,815,430 + -0.3
1,815,437 - B158DRAFT_1738 0.10 -0.9
1,815,455 + B158DRAFT_1738 0.12 -0.5
1,815,490 + B158DRAFT_1738 0.17 +0.3
1,815,498 - B158DRAFT_1738 0.18 -1.0
1,815,498 - B158DRAFT_1738 0.18 +0.1
1,815,498 - B158DRAFT_1738 0.18 -0.4
1,815,498 - B158DRAFT_1738 0.18 -0.5
1,815,498 - B158DRAFT_1738 0.18 -2.0
1,815,516 - B158DRAFT_1738 0.21 -0.6
1,815,523 + B158DRAFT_1738 0.22 -0.3
1,815,524 + B158DRAFT_1738 0.22 -0.6
1,815,537 + B158DRAFT_1738 0.24 -1.3
1,815,537 + B158DRAFT_1738 0.24 +0.6
1,815,545 - B158DRAFT_1738 0.25 +1.7
1,815,545 - B158DRAFT_1738 0.25 -1.5
1,815,581 - B158DRAFT_1738 0.29 -0.3
1,815,648 + B158DRAFT_1738 0.38 -1.6
1,815,703 + B158DRAFT_1738 0.46 -0.3
1,815,839 - B158DRAFT_1738 0.64 +0.2
1,815,851 - B158DRAFT_1738 0.66 -0.3
1,815,851 - B158DRAFT_1738 0.66 -0.5
1,815,867 + B158DRAFT_1738 0.68 -0.5
1,815,875 - B158DRAFT_1738 0.69 +0.0
1,815,926 - B158DRAFT_1738 0.76 +0.7
1,815,926 - B158DRAFT_1738 0.76 +0.4
1,815,936 + B158DRAFT_1738 0.77 -1.8
1,815,946 - B158DRAFT_1738 0.78 -0.0
1,815,992 - B158DRAFT_1738 0.85 -0.7
1,816,111 + +1.2
1,816,353 + +0.6
1,816,360 - +0.1
1,816,509 - B158DRAFT_1739 0.12 +0.9
1,816,648 - B158DRAFT_1739 0.16 +2.1
1,816,700 - B158DRAFT_1739 0.18 +1.0
1,816,719 - B158DRAFT_1739 0.18 +0.9
1,816,895 + B158DRAFT_1739 0.24 -0.4
1,816,898 + B158DRAFT_1739 0.24 -1.3
1,816,898 + B158DRAFT_1739 0.24 -1.2
1,816,906 - B158DRAFT_1739 0.24 -0.6
1,816,906 - B158DRAFT_1739 0.24 +0.5
1,816,939 - B158DRAFT_1739 0.25 +0.4
1,817,067 + B158DRAFT_1739 0.29 -1.2
1,817,090 + B158DRAFT_1739 0.29 +0.1
1,817,113 + B158DRAFT_1739 0.30 -0.2
1,817,113 + B158DRAFT_1739 0.30 +0.8
1,817,121 - B158DRAFT_1739 0.30 -0.4
1,817,149 + B158DRAFT_1739 0.31 -0.3
1,817,199 - B158DRAFT_1739 0.33 +0.4
1,817,239 + B158DRAFT_1739 0.34 +0.6
1,817,267 - B158DRAFT_1739 0.35 -1.0
1,817,269 - B158DRAFT_1739 0.35 -1.5
1,817,318 - B158DRAFT_1739 0.36 +0.4
1,817,336 + B158DRAFT_1739 0.37 -1.6
1,817,355 - B158DRAFT_1739 0.37 -0.7
1,817,355 - B158DRAFT_1739 0.37 -0.9
1,817,385 - B158DRAFT_1739 0.38 -0.1
1,817,399 + B158DRAFT_1739 0.39 -0.7
1,817,407 - B158DRAFT_1739 0.39 -1.9
1,817,516 - B158DRAFT_1739 0.42 -0.0
1,817,516 - B158DRAFT_1739 0.42 -0.1
1,817,518 - B158DRAFT_1739 0.42 -1.0
1,817,579 + B158DRAFT_1739 0.44 -0.3
1,817,802 + B158DRAFT_1739 0.51 +0.7
1,817,807 + B158DRAFT_1739 0.51 -0.0
1,817,877 + B158DRAFT_1739 0.53 -1.2
1,817,885 - B158DRAFT_1739 0.53 -0.3
1,817,893 + B158DRAFT_1739 0.53 -1.7
1,818,030 - B158DRAFT_1739 0.57 -0.4
1,818,088 - B158DRAFT_1739 0.59 -0.7
1,818,113 - B158DRAFT_1739 0.60 +0.5
1,818,147 - B158DRAFT_1739 0.61 +1.5
1,818,147 - B158DRAFT_1739 0.61 -1.9
1,818,161 - B158DRAFT_1739 0.61 -0.2
1,818,189 + B158DRAFT_1739 0.62 +0.7
1,818,196 + B158DRAFT_1739 0.62 +0.4
1,818,205 - B158DRAFT_1739 0.63 -0.1
1,818,374 - B158DRAFT_1739 0.68 +0.3
1,818,388 - B158DRAFT_1739 0.68 +0.4
1,818,390 + B158DRAFT_1739 0.68 -1.3
1,818,398 - B158DRAFT_1739 0.68 +0.0
1,818,398 - B158DRAFT_1739 0.68 +0.1
1,818,400 + B158DRAFT_1739 0.68 -0.1
1,818,404 + B158DRAFT_1739 0.69 -0.8
1,818,404 + B158DRAFT_1739 0.69 +0.7
1,818,448 - B158DRAFT_1739 0.70 -0.4
1,818,576 + B158DRAFT_1739 0.74 -1.2
1,818,584 - B158DRAFT_1739 0.74 -0.2
1,818,696 + B158DRAFT_1739 0.77 -1.2
1,818,852 + B158DRAFT_1739 0.82 -1.6
1,818,852 + B158DRAFT_1739 0.82 +0.3
1,818,852 + B158DRAFT_1739 0.82 -1.6
1,818,860 - B158DRAFT_1739 0.82 -0.1
1,818,860 - B158DRAFT_1739 0.82 +0.3
1,819,010 - B158DRAFT_1739 0.87 +0.5
1,819,012 + B158DRAFT_1739 0.87 +0.5
1,819,022 + B158DRAFT_1739 0.87 +0.7
1,819,099 - B158DRAFT_1739 0.89 +0.1
1,819,106 - B158DRAFT_1739 0.89 -0.2
1,819,157 - -0.4
1,819,220 + -0.0
1,819,228 - -0.8
1,819,308 - -0.5
1,819,369 - -0.2
1,819,419 + -0.3
1,819,467 + -0.3
1,819,468 + -0.0
1,819,481 - +0.4
1,819,489 - +1.2
1,819,639 - B158DRAFT_1740 0.17 -0.3
1,819,677 + B158DRAFT_1740 0.22 -0.4
1,819,677 + B158DRAFT_1740 0.22 -1.3
1,819,677 + B158DRAFT_1740 0.22 +0.1
1,819,677 + B158DRAFT_1740 0.22 -0.7
1,819,677 + B158DRAFT_1740 0.22 -0.3
1,819,677 + B158DRAFT_1740 0.22 -3.1
1,819,682 + B158DRAFT_1740 0.22 -0.9
1,819,685 - B158DRAFT_1740 0.22 +0.1
1,819,685 - B158DRAFT_1740 0.22 +0.3
1,819,685 - B158DRAFT_1740 0.22 +0.9
1,819,685 - B158DRAFT_1740 0.22 -1.9
1,819,685 - B158DRAFT_1740 0.22 -0.9
1,819,685 - B158DRAFT_1740 0.22 +0.0
1,819,685 - B158DRAFT_1740 0.22 -1.2
1,819,685 - B158DRAFT_1740 0.22 -1.5
1,819,685 - B158DRAFT_1740 0.22 -0.6
1,819,724 + B158DRAFT_1740 0.27 +0.1
1,819,724 + B158DRAFT_1740 0.27 -0.3
1,819,724 + B158DRAFT_1740 0.27 -0.2
1,819,753 - B158DRAFT_1740 0.30 -1.9
1,819,755 + B158DRAFT_1740 0.30 -2.5
1,819,755 + B158DRAFT_1740 0.30 +0.6
1,819,755 + B158DRAFT_1740 0.30 -1.5
1,819,755 + B158DRAFT_1740 0.30 -0.5
1,819,763 - B158DRAFT_1740 0.31 -1.8
1,819,789 + B158DRAFT_1740 0.34 -0.3
1,819,875 + B158DRAFT_1740 0.44 +1.7
1,819,899 - B158DRAFT_1740 0.46 -2.3
1,819,899 - B158DRAFT_1740 0.46 +0.3
1,819,982 + B158DRAFT_1740 0.56 -0.6
1,820,000 - B158DRAFT_1740 0.58 +0.2
1,820,038 + B158DRAFT_1740 0.62 -0.6
1,820,046 - B158DRAFT_1740 0.63 +0.6
1,820,070 - B158DRAFT_1740 0.65 -0.9
1,820,126 + B158DRAFT_1740 0.72 -0.1
1,820,176 + B158DRAFT_1740 0.77 -0.6
1,820,186 + B158DRAFT_1740 0.78 +1.1
1,820,202 + B158DRAFT_1740 0.80 +0.7
1,820,218 - B158DRAFT_1740 0.82 -1.1
1,820,256 - B158DRAFT_1740 0.86 -1.5
1,820,278 + B158DRAFT_1740 0.89 -1.9
1,820,278 + B158DRAFT_1740 0.89 -0.3
1,820,278 + B158DRAFT_1740 0.89 -0.7
1,820,278 + B158DRAFT_1740 0.89 -1.6
1,820,278 + B158DRAFT_1740 0.89 -0.1
1,820,281 - B158DRAFT_1740 0.89 -0.6
1,820,286 - B158DRAFT_1740 0.89 -0.9
1,820,286 - B158DRAFT_1740 0.89 -0.6
1,820,286 - B158DRAFT_1740 0.89 -1.1
1,820,299 - -1.0
1,820,352 + -1.3
1,820,352 + +0.2
1,820,355 - +0.5
1,820,360 - +0.5
1,820,360 - -0.2
1,820,360 - -2.2

Or see this region's nucleotide sequence