Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1457

Experiment: m.b. Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1455 and B158DRAFT_1456 are separated by 162 nucleotidesB158DRAFT_1456 and B158DRAFT_1457 are separated by 1 nucleotidesB158DRAFT_1457 and B158DRAFT_1458 are separated by 198 nucleotidesB158DRAFT_1458 and B158DRAFT_1459 are separated by 59 nucleotides B158DRAFT_1455: B158DRAFT_1455 - Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family, at 1,509,740 to 1,510,516 _1455 B158DRAFT_1456: B158DRAFT_1456 - RNA methyltransferase, TrmH family, group 1, at 1,510,679 to 1,511,500 _1456 B158DRAFT_1457: B158DRAFT_1457 - serine O-acetyltransferase, at 1,511,502 to 1,512,296 _1457 B158DRAFT_1458: B158DRAFT_1458 - transcriptional regulator, BadM/Rrf2 family, at 1,512,495 to 1,512,962 _1458 B158DRAFT_1459: B158DRAFT_1459 - cysteine desulfurase IscS, at 1,513,022 to 1,514,236 _1459 Position (kb) 1511 1512 1513Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1510.561 kb on - strandat 1510.619 kb on + strandat 1510.691 kb on - strandat 1510.737 kb on + strandat 1510.737 kb on + strandat 1510.737 kb on + strandat 1510.737 kb on + strandat 1510.737 kb on + strandat 1510.742 kb on + strandat 1510.745 kb on - strandat 1510.779 kb on - strand, within B158DRAFT_1456at 1510.800 kb on + strand, within B158DRAFT_1456at 1510.800 kb on + strand, within B158DRAFT_1456at 1510.820 kb on + strand, within B158DRAFT_1456at 1510.838 kb on - strand, within B158DRAFT_1456at 1510.869 kb on + strand, within B158DRAFT_1456at 1510.891 kb on + strand, within B158DRAFT_1456at 1510.891 kb on + strand, within B158DRAFT_1456at 1510.899 kb on - strand, within B158DRAFT_1456at 1510.899 kb on - strand, within B158DRAFT_1456at 1510.967 kb on + strand, within B158DRAFT_1456at 1510.972 kb on + strand, within B158DRAFT_1456at 1510.973 kb on + strand, within B158DRAFT_1456at 1510.973 kb on + strand, within B158DRAFT_1456at 1510.981 kb on - strand, within B158DRAFT_1456at 1510.981 kb on - strand, within B158DRAFT_1456at 1511.035 kb on + strand, within B158DRAFT_1456at 1511.054 kb on + strand, within B158DRAFT_1456at 1511.062 kb on - strand, within B158DRAFT_1456at 1511.078 kb on - strand, within B158DRAFT_1456at 1511.078 kb on - strand, within B158DRAFT_1456at 1511.125 kb on + strand, within B158DRAFT_1456at 1511.153 kb on - strand, within B158DRAFT_1456at 1511.170 kb on + strand, within B158DRAFT_1456at 1511.185 kb on + strand, within B158DRAFT_1456at 1511.231 kb on + strand, within B158DRAFT_1456at 1511.239 kb on - strand, within B158DRAFT_1456at 1511.255 kb on - strand, within B158DRAFT_1456at 1511.267 kb on + strand, within B158DRAFT_1456at 1511.290 kb on - strand, within B158DRAFT_1456at 1511.353 kb on + strand, within B158DRAFT_1456at 1511.353 kb on + strand, within B158DRAFT_1456at 1511.361 kb on - strand, within B158DRAFT_1456at 1511.361 kb on - strand, within B158DRAFT_1456at 1511.361 kb on - strand, within B158DRAFT_1456at 1512.042 kb on + strand, within B158DRAFT_1457at 1512.050 kb on + strand, within B158DRAFT_1457at 1512.163 kb on + strand, within B158DRAFT_1457at 1512.163 kb on + strand, within B158DRAFT_1457at 1512.163 kb on + strand, within B158DRAFT_1457at 1512.163 kb on + strand, within B158DRAFT_1457at 1512.163 kb on + strand, within B158DRAFT_1457at 1512.163 kb on + strand, within B158DRAFT_1457at 1512.171 kb on - strand, within B158DRAFT_1457at 1512.171 kb on - strand, within B158DRAFT_1457at 1512.171 kb on - strand, within B158DRAFT_1457at 1512.171 kb on - strand, within B158DRAFT_1457at 1512.171 kb on - strand, within B158DRAFT_1457at 1512.171 kb on - strand, within B158DRAFT_1457at 1512.171 kb on - strand, within B158DRAFT_1457at 1512.243 kb on - strandat 1512.248 kb on - strandat 1512.249 kb on + strandat 1512.258 kb on - strandat 1512.258 kb on - strandat 1512.258 kb on - strandat 1512.400 kb on + strandat 1512.422 kb on + strandat 1512.430 kb on - strandat 1512.546 kb on + strand, within B158DRAFT_1458at 1512.546 kb on + strand, within B158DRAFT_1458at 1512.546 kb on + strand, within B158DRAFT_1458at 1512.546 kb on + strand, within B158DRAFT_1458at 1512.546 kb on + strand, within B158DRAFT_1458

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM
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1,510,561 - +1.4
1,510,619 + -2.5
1,510,691 - -0.1
1,510,737 + -1.1
1,510,737 + +1.4
1,510,737 + +0.7
1,510,737 + -0.6
1,510,737 + -0.3
1,510,742 + +0.8
1,510,745 - +0.3
1,510,779 - B158DRAFT_1456 0.12 -0.8
1,510,800 + B158DRAFT_1456 0.15 +2.0
1,510,800 + B158DRAFT_1456 0.15 -0.9
1,510,820 + B158DRAFT_1456 0.17 +0.8
1,510,838 - B158DRAFT_1456 0.19 +0.0
1,510,869 + B158DRAFT_1456 0.23 -1.2
1,510,891 + B158DRAFT_1456 0.26 -1.7
1,510,891 + B158DRAFT_1456 0.26 -0.6
1,510,899 - B158DRAFT_1456 0.27 +1.4
1,510,899 - B158DRAFT_1456 0.27 +0.9
1,510,967 + B158DRAFT_1456 0.35 -0.3
1,510,972 + B158DRAFT_1456 0.36 -0.6
1,510,973 + B158DRAFT_1456 0.36 -0.8
1,510,973 + B158DRAFT_1456 0.36 +0.9
1,510,981 - B158DRAFT_1456 0.37 +1.5
1,510,981 - B158DRAFT_1456 0.37 +2.6
1,511,035 + B158DRAFT_1456 0.43 -1.3
1,511,054 + B158DRAFT_1456 0.46 +0.7
1,511,062 - B158DRAFT_1456 0.47 +1.5
1,511,078 - B158DRAFT_1456 0.49 +1.6
1,511,078 - B158DRAFT_1456 0.49 -2.1
1,511,125 + B158DRAFT_1456 0.54 +0.2
1,511,153 - B158DRAFT_1456 0.58 +1.0
1,511,170 + B158DRAFT_1456 0.60 -0.9
1,511,185 + B158DRAFT_1456 0.62 -0.6
1,511,231 + B158DRAFT_1456 0.67 +1.1
1,511,239 - B158DRAFT_1456 0.68 -0.3
1,511,255 - B158DRAFT_1456 0.70 +3.5
1,511,267 + B158DRAFT_1456 0.72 +0.6
1,511,290 - B158DRAFT_1456 0.74 +0.1
1,511,353 + B158DRAFT_1456 0.82 +1.6
1,511,353 + B158DRAFT_1456 0.82 -0.1
1,511,361 - B158DRAFT_1456 0.83 +0.8
1,511,361 - B158DRAFT_1456 0.83 +0.6
1,511,361 - B158DRAFT_1456 0.83 -0.2
1,512,042 + B158DRAFT_1457 0.68 +0.8
1,512,050 + B158DRAFT_1457 0.69 -2.7
1,512,163 + B158DRAFT_1457 0.83 +1.6
1,512,163 + B158DRAFT_1457 0.83 +2.0
1,512,163 + B158DRAFT_1457 0.83 -1.2
1,512,163 + B158DRAFT_1457 0.83 -0.6
1,512,163 + B158DRAFT_1457 0.83 +0.9
1,512,163 + B158DRAFT_1457 0.83 -0.3
1,512,171 - B158DRAFT_1457 0.84 +1.0
1,512,171 - B158DRAFT_1457 0.84 +0.0
1,512,171 - B158DRAFT_1457 0.84 +0.6
1,512,171 - B158DRAFT_1457 0.84 +0.6
1,512,171 - B158DRAFT_1457 0.84 +0.1
1,512,171 - B158DRAFT_1457 0.84 -0.1
1,512,171 - B158DRAFT_1457 0.84 -0.9
1,512,243 - +0.6
1,512,248 - +0.4
1,512,249 + +0.2
1,512,258 - +0.3
1,512,258 - -0.4
1,512,258 - -0.2
1,512,400 + -0.4
1,512,422 + -0.2
1,512,430 - -0.2
1,512,546 + B158DRAFT_1458 0.11 +1.6
1,512,546 + B158DRAFT_1458 0.11 +2.0
1,512,546 + B158DRAFT_1458 0.11 +1.9
1,512,546 + B158DRAFT_1458 0.11 +1.0
1,512,546 + B158DRAFT_1458 0.11 +1.4

Or see this region's nucleotide sequence