Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1445

Experiment: m.b. Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1444 and B158DRAFT_1445 are separated by 371 nucleotidesB158DRAFT_1445 and B158DRAFT_1446 are separated by 381 nucleotides B158DRAFT_1444: B158DRAFT_1444 - Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains), at 1,496,488 to 1,498,425 _1444 B158DRAFT_1445: B158DRAFT_1445 - Phenylalanine 4-hydroxylase (EC 1.14.16.1), at 1,498,797 to 1,499,600 _1445 B158DRAFT_1446: B158DRAFT_1446 - 4-hydroxyphenylpyruvate dioxygenase, at 1,499,982 to 1,501,043 _1446 Position (kb) 1498 1499 1500Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1497.799 kb on - strand, within B158DRAFT_1444at 1497.804 kb on - strand, within B158DRAFT_1444at 1497.964 kb on + strand, within B158DRAFT_1444at 1497.984 kb on + strand, within B158DRAFT_1444at 1498.012 kb on - strand, within B158DRAFT_1444at 1498.042 kb on + strand, within B158DRAFT_1444at 1498.136 kb on + strand, within B158DRAFT_1444at 1498.149 kb on - strand, within B158DRAFT_1444at 1498.201 kb on + strand, within B158DRAFT_1444at 1498.232 kb on + strandat 1498.240 kb on - strandat 1498.299 kb on + strandat 1498.307 kb on - strandat 1498.333 kb on + strandat 1498.341 kb on - strandat 1498.343 kb on + strandat 1498.343 kb on + strandat 1498.351 kb on - strandat 1498.351 kb on - strandat 1498.352 kb on + strandat 1498.352 kb on + strandat 1498.357 kb on + strandat 1498.360 kb on - strandat 1498.360 kb on - strandat 1498.360 kb on - strandat 1498.360 kb on - strandat 1498.360 kb on - strandat 1498.360 kb on - strandat 1498.360 kb on - strandat 1498.367 kb on + strandat 1498.367 kb on + strandat 1498.367 kb on + strandat 1498.369 kb on + strandat 1498.375 kb on - strandat 1498.375 kb on - strandat 1498.375 kb on - strandat 1498.404 kb on + strandat 1498.404 kb on + strandat 1498.429 kb on - strandat 1498.429 kb on - strandat 1498.462 kb on + strandat 1498.474 kb on + strandat 1498.482 kb on - strandat 1498.700 kb on + strandat 1498.771 kb on + strandat 1498.778 kb on + strandat 1498.779 kb on - strandat 1498.814 kb on + strandat 1498.814 kb on + strandat 1498.814 kb on + strandat 1498.814 kb on + strandat 1498.814 kb on + strandat 1498.814 kb on + strandat 1498.814 kb on - strandat 1498.822 kb on - strandat 1498.917 kb on + strand, within B158DRAFT_1445at 1498.925 kb on - strand, within B158DRAFT_1445at 1498.935 kb on - strand, within B158DRAFT_1445at 1498.954 kb on + strand, within B158DRAFT_1445at 1499.036 kb on - strand, within B158DRAFT_1445at 1499.085 kb on + strand, within B158DRAFT_1445at 1499.085 kb on + strand, within B158DRAFT_1445at 1499.106 kb on + strand, within B158DRAFT_1445at 1499.216 kb on - strand, within B158DRAFT_1445at 1499.229 kb on + strand, within B158DRAFT_1445at 1499.254 kb on - strand, within B158DRAFT_1445at 1499.303 kb on - strand, within B158DRAFT_1445at 1499.325 kb on - strand, within B158DRAFT_1445at 1499.348 kb on + strand, within B158DRAFT_1445at 1499.386 kb on + strand, within B158DRAFT_1445at 1499.435 kb on + strand, within B158DRAFT_1445at 1499.439 kb on - strand, within B158DRAFT_1445at 1499.460 kb on + strand, within B158DRAFT_1445at 1499.509 kb on + strand, within B158DRAFT_1445at 1499.510 kb on + strand, within B158DRAFT_1445at 1499.528 kb on + strandat 1499.545 kb on + strandat 1499.555 kb on + strandat 1499.558 kb on - strandat 1499.562 kb on + strandat 1499.563 kb on - strandat 1499.600 kb on + strandat 1499.605 kb on + strandat 1499.717 kb on - strandat 1499.747 kb on + strandat 1499.747 kb on + strandat 1499.755 kb on - strandat 1499.758 kb on + strandat 1499.785 kb on - strandat 1499.795 kb on - strandat 1499.808 kb on + strandat 1499.867 kb on + strandat 1499.867 kb on + strandat 1499.874 kb on - strandat 1499.875 kb on - strandat 1499.875 kb on - strandat 1499.929 kb on - strandat 1500.010 kb on + strandat 1500.037 kb on + strandat 1500.177 kb on - strand, within B158DRAFT_1446at 1500.187 kb on + strand, within B158DRAFT_1446at 1500.224 kb on - strand, within B158DRAFT_1446at 1500.226 kb on + strand, within B158DRAFT_1446at 1500.233 kb on + strand, within B158DRAFT_1446at 1500.276 kb on + strand, within B158DRAFT_1446at 1500.284 kb on - strand, within B158DRAFT_1446at 1500.284 kb on - strand, within B158DRAFT_1446at 1500.286 kb on + strand, within B158DRAFT_1446at 1500.286 kb on + strand, within B158DRAFT_1446at 1500.294 kb on - strand, within B158DRAFT_1446at 1500.323 kb on - strand, within B158DRAFT_1446at 1500.351 kb on + strand, within B158DRAFT_1446at 1500.351 kb on + strand, within B158DRAFT_1446at 1500.351 kb on + strand, within B158DRAFT_1446at 1500.351 kb on + strand, within B158DRAFT_1446at 1500.351 kb on + strand, within B158DRAFT_1446at 1500.354 kb on - strand, within B158DRAFT_1446at 1500.359 kb on - strand, within B158DRAFT_1446at 1500.359 kb on - strand, within B158DRAFT_1446at 1500.359 kb on - strand, within B158DRAFT_1446at 1500.359 kb on - strand, within B158DRAFT_1446at 1500.359 kb on - strand, within B158DRAFT_1446at 1500.359 kb on - strand, within B158DRAFT_1446at 1500.359 kb on - strand, within B158DRAFT_1446at 1500.359 kb on - strand, within B158DRAFT_1446at 1500.359 kb on - strand, within B158DRAFT_1446at 1500.359 kb on - strand, within B158DRAFT_1446at 1500.359 kb on - strand, within B158DRAFT_1446at 1500.359 kb on - strand, within B158DRAFT_1446at 1500.359 kb on - strand, within B158DRAFT_1446at 1500.392 kb on - strand, within B158DRAFT_1446at 1500.445 kb on + strand, within B158DRAFT_1446at 1500.460 kb on + strand, within B158DRAFT_1446at 1500.460 kb on + strand, within B158DRAFT_1446at 1500.460 kb on - strand, within B158DRAFT_1446at 1500.481 kb on + strand, within B158DRAFT_1446at 1500.488 kb on + strand, within B158DRAFT_1446at 1500.496 kb on + strand, within B158DRAFT_1446at 1500.496 kb on + strand, within B158DRAFT_1446at 1500.496 kb on - strand, within B158DRAFT_1446at 1500.504 kb on - strand, within B158DRAFT_1446at 1500.579 kb on + strand, within B158DRAFT_1446at 1500.579 kb on + strand, within B158DRAFT_1446at 1500.579 kb on + strandat 1500.579 kb on + strand, within B158DRAFT_1446at 1500.587 kb on - strand, within B158DRAFT_1446at 1500.587 kb on - strand, within B158DRAFT_1446at 1500.587 kb on - strand, within B158DRAFT_1446at 1500.593 kb on + strand, within B158DRAFT_1446

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM
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1,497,799 - B158DRAFT_1444 0.68 +1.1
1,497,804 - B158DRAFT_1444 0.68 +1.4
1,497,964 + B158DRAFT_1444 0.76 +1.6
1,497,984 + B158DRAFT_1444 0.77 +2.2
1,498,012 - B158DRAFT_1444 0.79 -0.9
1,498,042 + B158DRAFT_1444 0.80 +1.1
1,498,136 + B158DRAFT_1444 0.85 +1.2
1,498,149 - B158DRAFT_1444 0.86 +1.1
1,498,201 + B158DRAFT_1444 0.88 +1.5
1,498,232 + +1.7
1,498,240 - +1.3
1,498,299 + +2.3
1,498,307 - +2.2
1,498,333 + +1.0
1,498,341 - -0.9
1,498,343 + +1.9
1,498,343 + +2.3
1,498,351 - +0.6
1,498,351 - +1.2
1,498,352 + +1.7
1,498,352 + +1.2
1,498,357 + +1.5
1,498,360 - +0.2
1,498,360 - +0.7
1,498,360 - +1.8
1,498,360 - +1.5
1,498,360 - +0.0
1,498,360 - -0.7
1,498,360 - +0.6
1,498,367 + +1.6
1,498,367 + +0.7
1,498,367 + +1.7
1,498,369 + -1.2
1,498,375 - -0.9
1,498,375 - +1.7
1,498,375 - +0.3
1,498,404 + +0.7
1,498,404 + +1.3
1,498,429 - +0.2
1,498,429 - -0.5
1,498,462 + +1.6
1,498,474 + +1.9
1,498,482 - +1.1
1,498,700 + -0.8
1,498,771 + +0.1
1,498,778 + -1.0
1,498,779 - -1.1
1,498,814 + -1.0
1,498,814 + -1.3
1,498,814 + -1.4
1,498,814 + -0.6
1,498,814 + -1.8
1,498,814 + -1.8
1,498,814 - -1.6
1,498,822 - -1.3
1,498,917 + B158DRAFT_1445 0.15 +0.1
1,498,925 - B158DRAFT_1445 0.16 -0.1
1,498,935 - B158DRAFT_1445 0.17 -0.6
1,498,954 + B158DRAFT_1445 0.20 +0.1
1,499,036 - B158DRAFT_1445 0.30 -0.9
1,499,085 + B158DRAFT_1445 0.36 -0.2
1,499,085 + B158DRAFT_1445 0.36 -0.6
1,499,106 + B158DRAFT_1445 0.38 -2.3
1,499,216 - B158DRAFT_1445 0.52 -0.9
1,499,229 + B158DRAFT_1445 0.54 -0.1
1,499,254 - B158DRAFT_1445 0.57 -1.1
1,499,303 - B158DRAFT_1445 0.63 -0.7
1,499,325 - B158DRAFT_1445 0.66 -1.8
1,499,348 + B158DRAFT_1445 0.69 -0.8
1,499,386 + B158DRAFT_1445 0.73 -1.1
1,499,435 + B158DRAFT_1445 0.79 -0.1
1,499,439 - B158DRAFT_1445 0.80 -1.0
1,499,460 + B158DRAFT_1445 0.82 -0.7
1,499,509 + B158DRAFT_1445 0.89 -1.6
1,499,510 + B158DRAFT_1445 0.89 +0.7
1,499,528 + -0.7
1,499,545 + -0.6
1,499,555 + -0.1
1,499,558 - -2.8
1,499,562 + -1.6
1,499,563 - -0.3
1,499,600 + +0.1
1,499,605 + +0.0
1,499,717 - +0.5
1,499,747 + +0.3
1,499,747 + +1.4
1,499,755 - -1.1
1,499,758 + +0.4
1,499,785 - -2.0
1,499,795 - +0.7
1,499,808 + -0.3
1,499,867 + +1.3
1,499,867 + +0.6
1,499,874 - -0.3
1,499,875 - +1.1
1,499,875 - +1.9
1,499,929 - -0.4
1,500,010 + -0.1
1,500,037 + +0.9
1,500,177 - B158DRAFT_1446 0.18 +1.2
1,500,187 + B158DRAFT_1446 0.19 +1.0
1,500,224 - B158DRAFT_1446 0.23 +0.2
1,500,226 + B158DRAFT_1446 0.23 -1.0
1,500,233 + B158DRAFT_1446 0.24 -0.3
1,500,276 + B158DRAFT_1446 0.28 -1.3
1,500,284 - B158DRAFT_1446 0.28 -1.5
1,500,284 - B158DRAFT_1446 0.28 -0.1
1,500,286 + B158DRAFT_1446 0.29 -0.7
1,500,286 + B158DRAFT_1446 0.29 -0.3
1,500,294 - B158DRAFT_1446 0.29 -1.7
1,500,323 - B158DRAFT_1446 0.32 -0.4
1,500,351 + B158DRAFT_1446 0.35 +0.3
1,500,351 + B158DRAFT_1446 0.35 -1.3
1,500,351 + B158DRAFT_1446 0.35 -0.0
1,500,351 + B158DRAFT_1446 0.35 -2.9
1,500,351 + B158DRAFT_1446 0.35 -0.7
1,500,354 - B158DRAFT_1446 0.35 +1.6
1,500,359 - B158DRAFT_1446 0.35 -2.7
1,500,359 - B158DRAFT_1446 0.35 -0.4
1,500,359 - B158DRAFT_1446 0.35 -1.4
1,500,359 - B158DRAFT_1446 0.35 -1.0
1,500,359 - B158DRAFT_1446 0.35 -1.1
1,500,359 - B158DRAFT_1446 0.35 -1.2
1,500,359 - B158DRAFT_1446 0.35 -0.1
1,500,359 - B158DRAFT_1446 0.35 +0.1
1,500,359 - B158DRAFT_1446 0.35 -0.5
1,500,359 - B158DRAFT_1446 0.35 -0.2
1,500,359 - B158DRAFT_1446 0.35 -0.8
1,500,359 - B158DRAFT_1446 0.35 -0.9
1,500,359 - B158DRAFT_1446 0.35 -1.3
1,500,392 - B158DRAFT_1446 0.39 -0.4
1,500,445 + B158DRAFT_1446 0.44 -1.0
1,500,460 + B158DRAFT_1446 0.45 -1.4
1,500,460 + B158DRAFT_1446 0.45 -0.9
1,500,460 - B158DRAFT_1446 0.45 -0.9
1,500,481 + B158DRAFT_1446 0.47 -1.3
1,500,488 + B158DRAFT_1446 0.48 -0.1
1,500,496 + B158DRAFT_1446 0.48 -1.7
1,500,496 + B158DRAFT_1446 0.48 +0.5
1,500,496 - B158DRAFT_1446 0.48 -0.2
1,500,504 - B158DRAFT_1446 0.49 -0.4
1,500,579 + B158DRAFT_1446 0.56 -1.1
1,500,579 + B158DRAFT_1446 0.56 -0.5
1,500,579 + +2.0
1,500,579 + B158DRAFT_1446 0.56 +0.3
1,500,587 - B158DRAFT_1446 0.57 -0.9
1,500,587 - B158DRAFT_1446 0.57 -1.5
1,500,587 - B158DRAFT_1446 0.57 +0.0
1,500,593 + B158DRAFT_1446 0.58 +0.3

Or see this region's nucleotide sequence