Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0960 and B158DRAFT_0961 are separated by 427 nucleotides B158DRAFT_0961 and B158DRAFT_0962 overlap by 4 nucleotides
B158DRAFT_0960: B158DRAFT_0960 - Site-specific recombinases, DNA invertase Pin homologs, at 991,081 to 991,635
_0960
B158DRAFT_0961: B158DRAFT_0961 - hypothetical protein, at 992,063 to 993,115
_0961
B158DRAFT_0962: B158DRAFT_0962 - Restriction endonuclease, at 993,112 to 994,197
_0962
Position (kb) 992
993
994 Strain fitness (log2 ratio) -2
-1
0
1
2 at 991.094 kb on + strand at 991.094 kb on + strand at 991.150 kb on + strand, within B158DRAFT_0960 at 991.150 kb on + strand, within B158DRAFT_0960 at 991.258 kb on + strand, within B158DRAFT_0960 at 991.286 kb on + strand, within B158DRAFT_0960 at 991.294 kb on - strand, within B158DRAFT_0960 at 991.405 kb on + strand, within B158DRAFT_0960 at 991.422 kb on + strand, within B158DRAFT_0960 at 991.422 kb on + strand, within B158DRAFT_0960 at 991.430 kb on - strand, within B158DRAFT_0960 at 991.430 kb on - strand, within B158DRAFT_0960 at 991.440 kb on - strand, within B158DRAFT_0960 at 991.461 kb on - strand, within B158DRAFT_0960 at 991.492 kb on - strand, within B158DRAFT_0960 at 991.548 kb on - strand, within B158DRAFT_0960 at 991.654 kb on + strand at 991.678 kb on + strand at 991.723 kb on + strand at 991.731 kb on - strand at 991.735 kb on + strand at 991.794 kb on + strand at 991.953 kb on - strand at 991.978 kb on + strand at 992.319 kb on + strand, within B158DRAFT_0961 at 992.429 kb on - strand, within B158DRAFT_0961 at 992.431 kb on + strand, within B158DRAFT_0961 at 992.439 kb on - strand, within B158DRAFT_0961 at 992.439 kb on - strand, within B158DRAFT_0961 at 992.439 kb on - strand, within B158DRAFT_0961 at 992.793 kb on + strand, within B158DRAFT_0961 at 992.801 kb on - strand, within B158DRAFT_0961 at 992.873 kb on + strand, within B158DRAFT_0961 at 992.875 kb on + strand, within B158DRAFT_0961 at 992.883 kb on - strand, within B158DRAFT_0961 at 992.908 kb on + strand, within B158DRAFT_0961 at 992.908 kb on + strand, within B158DRAFT_0961 at 992.908 kb on + strand, within B158DRAFT_0961 at 992.913 kb on + strand, within B158DRAFT_0961 at 992.916 kb on - strand, within B158DRAFT_0961 at 992.916 kb on - strand, within B158DRAFT_0961 at 992.916 kb on - strand, within B158DRAFT_0961 at 992.916 kb on - strand, within B158DRAFT_0961 at 992.916 kb on - strand, within B158DRAFT_0961 at 992.916 kb on - strand, within B158DRAFT_0961 at 993.022 kb on + strand at 993.306 kb on + strand, within B158DRAFT_0962 at 993.314 kb on - strand, within B158DRAFT_0962 at 993.354 kb on + strand, within B158DRAFT_0962 at 993.405 kb on - strand, within B158DRAFT_0962 at 993.573 kb on + strand, within B158DRAFT_0962 at 993.581 kb on - strand, within B158DRAFT_0962 at 993.842 kb on + strand, within B158DRAFT_0962 at 993.848 kb on - strand, within B158DRAFT_0962
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 991,094 + +0.1 991,094 + -0.2 991,150 + B158DRAFT_0960 0.12 -0.2 991,150 + B158DRAFT_0960 0.12 -1.4 991,258 + B158DRAFT_0960 0.32 -1.1 991,286 + B158DRAFT_0960 0.37 +0.7 991,294 - B158DRAFT_0960 0.38 +1.9 991,405 + B158DRAFT_0960 0.58 +0.1 991,422 + B158DRAFT_0960 0.61 +0.6 991,422 + B158DRAFT_0960 0.61 +0.4 991,430 - B158DRAFT_0960 0.63 -1.9 991,430 - B158DRAFT_0960 0.63 +0.2 991,440 - B158DRAFT_0960 0.65 -1.3 991,461 - B158DRAFT_0960 0.68 +0.5 991,492 - B158DRAFT_0960 0.74 -1.1 991,548 - B158DRAFT_0960 0.84 -0.2 991,654 + -0.6 991,678 + +0.0 991,723 + -1.1 991,731 - -1.1 991,735 + -0.9 991,794 + -0.7 991,953 - -1.8 991,978 + +0.3 992,319 + B158DRAFT_0961 0.24 -0.8 992,429 - B158DRAFT_0961 0.35 -1.2 992,431 + B158DRAFT_0961 0.35 +0.3 992,439 - B158DRAFT_0961 0.36 -1.7 992,439 - B158DRAFT_0961 0.36 -1.9 992,439 - B158DRAFT_0961 0.36 -2.3 992,793 + B158DRAFT_0961 0.69 -2.5 992,801 - B158DRAFT_0961 0.70 +0.5 992,873 + B158DRAFT_0961 0.77 -0.7 992,875 + B158DRAFT_0961 0.77 -1.7 992,883 - B158DRAFT_0961 0.78 -1.6 992,908 + B158DRAFT_0961 0.80 +1.1 992,908 + B158DRAFT_0961 0.80 -1.1 992,908 + B158DRAFT_0961 0.80 -1.2 992,913 + B158DRAFT_0961 0.81 +0.5 992,916 - B158DRAFT_0961 0.81 +0.2 992,916 - B158DRAFT_0961 0.81 -2.2 992,916 - B158DRAFT_0961 0.81 -0.7 992,916 - B158DRAFT_0961 0.81 -0.8 992,916 - B158DRAFT_0961 0.81 -0.2 992,916 - B158DRAFT_0961 0.81 -1.7 993,022 + +0.8 993,306 + B158DRAFT_0962 0.18 +0.7 993,314 - B158DRAFT_0962 0.19 -0.7 993,354 + B158DRAFT_0962 0.22 -0.1 993,405 - B158DRAFT_0962 0.27 -0.2 993,573 + B158DRAFT_0962 0.42 -1.5 993,581 - B158DRAFT_0962 0.43 -0.1 993,842 + B158DRAFT_0962 0.67 -0.7 993,848 - B158DRAFT_0962 0.68 +1.4
Or see this region's nucleotide sequence