Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0798

Experiment: m.b. Chloride 500 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0796 and B158DRAFT_0797 are separated by 72 nucleotidesB158DRAFT_0797 and B158DRAFT_0798 are separated by 282 nucleotidesB158DRAFT_0798 and B158DRAFT_0799 are separated by 259 nucleotides B158DRAFT_0796: B158DRAFT_0796 - NAD-dependent protein deacetylases, SIR2 family, at 800,408 to 801,142 _0796 B158DRAFT_0797: B158DRAFT_0797 - Predicted endonuclease containing a URI domain, at 801,215 to 801,505 _0797 B158DRAFT_0798: B158DRAFT_0798 - phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio type, at 801,788 to 802,894 _0798 B158DRAFT_0799: B158DRAFT_0799 - aconitate hydratase 1, at 803,154 to 805,859 _0799 Position (kb) 801 802 803Strain fitness (log2 ratio) -2 -1 0 1 2at 800.791 kb on + strand, within B158DRAFT_0796at 800.875 kb on + strand, within B158DRAFT_0796at 800.875 kb on - strand, within B158DRAFT_0796at 800.877 kb on + strand, within B158DRAFT_0796at 800.877 kb on + strand, within B158DRAFT_0796at 800.882 kb on + strand, within B158DRAFT_0796at 800.882 kb on + strand, within B158DRAFT_0796at 800.882 kb on + strand, within B158DRAFT_0796at 800.882 kb on + strand, within B158DRAFT_0796at 800.888 kb on + strand, within B158DRAFT_0796at 800.888 kb on - strand, within B158DRAFT_0796at 800.890 kb on - strand, within B158DRAFT_0796at 800.890 kb on - strand, within B158DRAFT_0796at 800.940 kb on - strand, within B158DRAFT_0796at 800.940 kb on - strand, within B158DRAFT_0796at 800.940 kb on - strand, within B158DRAFT_0796at 800.940 kb on - strand, within B158DRAFT_0796at 800.945 kb on + strand, within B158DRAFT_0796at 800.982 kb on - strand, within B158DRAFT_0796at 801.001 kb on + strand, within B158DRAFT_0796at 801.001 kb on + strand, within B158DRAFT_0796at 801.009 kb on - strand, within B158DRAFT_0796at 801.009 kb on - strand, within B158DRAFT_0796at 801.009 kb on - strand, within B158DRAFT_0796at 801.020 kb on - strand, within B158DRAFT_0796at 801.025 kb on - strand, within B158DRAFT_0796at 801.066 kb on + strand, within B158DRAFT_0796at 801.076 kb on + strandat 801.177 kb on + strandat 801.177 kb on + strandat 801.177 kb on + strandat 801.177 kb on + strandat 801.177 kb on + strandat 801.177 kb on + strandat 801.185 kb on - strandat 801.215 kb on - strandat 801.417 kb on + strand, within B158DRAFT_0797at 801.425 kb on - strand, within B158DRAFT_0797at 801.425 kb on - strand, within B158DRAFT_0797at 801.425 kb on - strand, within B158DRAFT_0797at 801.618 kb on - strandat 801.618 kb on - strandat 801.783 kb on + strandat 801.806 kb on - strandat 802.972 kb on + strandat 803.018 kb on - strandat 803.028 kb on - strandat 803.038 kb on + strandat 803.046 kb on - strandat 803.086 kb on + strandat 803.104 kb on - strandat 803.106 kb on + strandat 803.181 kb on - strandat 803.194 kb on - strandat 803.237 kb on - strandat 803.244 kb on + strandat 803.244 kb on + strandat 803.244 kb on + strandat 803.298 kb on + strandat 803.300 kb on + strandat 803.313 kb on + strandat 803.314 kb on + strandat 803.321 kb on - strandat 803.328 kb on + strandat 803.344 kb on - strandat 803.387 kb on + strandat 803.387 kb on + strandat 803.387 kb on + strandat 803.387 kb on + strandat 803.387 kb on + strandat 803.387 kb on + strandat 803.387 kb on + strandat 803.395 kb on - strandat 803.395 kb on - strandat 803.395 kb on - strandat 803.395 kb on - strandat 803.395 kb on - strandat 803.395 kb on - strandat 803.517 kb on + strand, within B158DRAFT_0799at 803.546 kb on - strand, within B158DRAFT_0799at 803.600 kb on + strand, within B158DRAFT_0799at 803.624 kb on + strand, within B158DRAFT_0799at 803.654 kb on + strand, within B158DRAFT_0799at 803.662 kb on - strand, within B158DRAFT_0799at 803.706 kb on - strand, within B158DRAFT_0799at 803.720 kb on - strand, within B158DRAFT_0799at 803.759 kb on + strand, within B158DRAFT_0799at 803.764 kb on + strand, within B158DRAFT_0799at 803.764 kb on + strand, within B158DRAFT_0799at 803.772 kb on - strand, within B158DRAFT_0799at 803.772 kb on - strand, within B158DRAFT_0799at 803.772 kb on - strand, within B158DRAFT_0799at 803.794 kb on + strand, within B158DRAFT_0799at 803.802 kb on - strand, within B158DRAFT_0799at 803.809 kb on + strand, within B158DRAFT_0799at 803.824 kb on + strand, within B158DRAFT_0799at 803.873 kb on + strand, within B158DRAFT_0799at 803.887 kb on + strand, within B158DRAFT_0799at 803.887 kb on + strand, within B158DRAFT_0799

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM
remove
800,791 + B158DRAFT_0796 0.52 -0.3
800,875 + B158DRAFT_0796 0.64 -0.3
800,875 - B158DRAFT_0796 0.64 +0.3
800,877 + B158DRAFT_0796 0.64 +2.1
800,877 + B158DRAFT_0796 0.64 +1.6
800,882 + B158DRAFT_0796 0.64 -0.4
800,882 + B158DRAFT_0796 0.64 -0.4
800,882 + B158DRAFT_0796 0.64 -0.4
800,882 + B158DRAFT_0796 0.64 +0.7
800,888 + B158DRAFT_0796 0.65 +1.4
800,888 - B158DRAFT_0796 0.65 +0.5
800,890 - B158DRAFT_0796 0.66 +0.3
800,890 - B158DRAFT_0796 0.66 -2.5
800,940 - B158DRAFT_0796 0.72 -0.6
800,940 - B158DRAFT_0796 0.72 -0.2
800,940 - B158DRAFT_0796 0.72 +0.8
800,940 - B158DRAFT_0796 0.72 +0.2
800,945 + B158DRAFT_0796 0.73 -0.2
800,982 - B158DRAFT_0796 0.78 -2.2
801,001 + B158DRAFT_0796 0.81 -0.0
801,001 + B158DRAFT_0796 0.81 -0.4
801,009 - B158DRAFT_0796 0.82 +1.2
801,009 - B158DRAFT_0796 0.82 -1.3
801,009 - B158DRAFT_0796 0.82 +0.3
801,020 - B158DRAFT_0796 0.83 -0.2
801,025 - B158DRAFT_0796 0.84 -0.6
801,066 + B158DRAFT_0796 0.90 -1.0
801,076 + -0.4
801,177 + -0.4
801,177 + +0.5
801,177 + -0.9
801,177 + -0.6
801,177 + -1.1
801,177 + +0.4
801,185 - -0.2
801,215 - -0.8
801,417 + B158DRAFT_0797 0.69 -1.2
801,425 - B158DRAFT_0797 0.72 +1.4
801,425 - B158DRAFT_0797 0.72 -1.8
801,425 - B158DRAFT_0797 0.72 -0.2
801,618 - -0.1
801,618 - -1.7
801,783 + -0.4
801,806 - -0.7
802,972 + +0.6
803,018 - +0.2
803,028 - -0.4
803,038 + -0.3
803,046 - -0.3
803,086 + -0.6
803,104 - -1.0
803,106 + -1.0
803,181 - -1.3
803,194 - +0.5
803,237 - -0.5
803,244 + -0.7
803,244 + +0.5
803,244 + +0.1
803,298 + +0.6
803,300 + -0.3
803,313 + +0.2
803,314 + -0.7
803,321 - +0.4
803,328 + -0.0
803,344 - -1.3
803,387 + -0.4
803,387 + +0.2
803,387 + -1.8
803,387 + -0.5
803,387 + -0.9
803,387 + +0.2
803,387 + +0.4
803,395 - -0.1
803,395 - -0.3
803,395 - -2.2
803,395 - -0.5
803,395 - -0.6
803,395 - -0.5
803,517 + B158DRAFT_0799 0.13 +0.4
803,546 - B158DRAFT_0799 0.14 +0.8
803,600 + B158DRAFT_0799 0.16 +1.4
803,624 + B158DRAFT_0799 0.17 +1.0
803,654 + B158DRAFT_0799 0.18 +1.0
803,662 - B158DRAFT_0799 0.19 +2.4
803,706 - B158DRAFT_0799 0.20 +0.1
803,720 - B158DRAFT_0799 0.21 +1.2
803,759 + B158DRAFT_0799 0.22 -1.7
803,764 + B158DRAFT_0799 0.23 -1.0
803,764 + B158DRAFT_0799 0.23 -0.7
803,772 - B158DRAFT_0799 0.23 +0.0
803,772 - B158DRAFT_0799 0.23 +0.5
803,772 - B158DRAFT_0799 0.23 +0.4
803,794 + B158DRAFT_0799 0.24 -0.3
803,802 - B158DRAFT_0799 0.24 -0.3
803,809 + B158DRAFT_0799 0.24 +0.4
803,824 + B158DRAFT_0799 0.25 +0.2
803,873 + B158DRAFT_0799 0.27 -0.5
803,887 + B158DRAFT_0799 0.27 +0.1
803,887 + B158DRAFT_0799 0.27 +0.4

Or see this region's nucleotide sequence