Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0315

Experiment: m.b. Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0312 and B158DRAFT_0313 are separated by 22 nucleotidesB158DRAFT_0313 and B158DRAFT_0314 overlap by 4 nucleotidesB158DRAFT_0314 and B158DRAFT_0315 are separated by 124 nucleotidesB158DRAFT_0315 and B158DRAFT_0316 are separated by 51 nucleotides B158DRAFT_0312: B158DRAFT_0312 - hypothetical protein, at 316,780 to 317,160 _0312 B158DRAFT_0313: B158DRAFT_0313 - hypothetical protein, at 317,183 to 317,380 _0313 B158DRAFT_0314: B158DRAFT_0314 - hypothetical protein, at 317,377 to 317,808 _0314 B158DRAFT_0315: B158DRAFT_0315 - Cytochrome B561, at 317,933 to 318,469 _0315 B158DRAFT_0316: B158DRAFT_0316 - hypothetical protein, at 318,521 to 319,351 _0316 Position (kb) 317 318 319Strain fitness (log2 ratio) -2 -1 0 1at 316.949 kb on + strand, within B158DRAFT_0312at 316.990 kb on + strand, within B158DRAFT_0312at 317.201 kb on - strandat 317.297 kb on + strand, within B158DRAFT_0313at 317.304 kb on - strand, within B158DRAFT_0313at 317.361 kb on - strandat 317.433 kb on - strand, within B158DRAFT_0314at 317.446 kb on + strand, within B158DRAFT_0314at 317.465 kb on - strand, within B158DRAFT_0314at 317.748 kb on + strand, within B158DRAFT_0314at 317.756 kb on - strand, within B158DRAFT_0314at 317.789 kb on + strandat 317.854 kb on + strandat 318.135 kb on - strand, within B158DRAFT_0315at 318.135 kb on - strand, within B158DRAFT_0315at 318.172 kb on - strand, within B158DRAFT_0315at 318.177 kb on + strand, within B158DRAFT_0315at 318.182 kb on - strand, within B158DRAFT_0315at 318.305 kb on + strand, within B158DRAFT_0315at 318.313 kb on + strand, within B158DRAFT_0315at 318.329 kb on + strand, within B158DRAFT_0315at 318.337 kb on - strand, within B158DRAFT_0315at 318.421 kb on + strandat 318.487 kb on - strandat 318.589 kb on - strandat 318.589 kb on - strandat 318.724 kb on + strand, within B158DRAFT_0316at 318.754 kb on - strand, within B158DRAFT_0316at 318.966 kb on + strand, within B158DRAFT_0316at 319.101 kb on - strand, within B158DRAFT_0316at 319.141 kb on + strand, within B158DRAFT_0316at 319.180 kb on - strand, within B158DRAFT_0316at 319.180 kb on - strand, within B158DRAFT_0316at 319.180 kb on - strand, within B158DRAFT_0316

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM
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316,949 + B158DRAFT_0312 0.44 -0.6
316,990 + B158DRAFT_0312 0.55 -1.0
317,201 - +0.1
317,297 + B158DRAFT_0313 0.58 -1.2
317,304 - B158DRAFT_0313 0.61 +1.7
317,361 - +0.2
317,433 - B158DRAFT_0314 0.13 -1.8
317,446 + B158DRAFT_0314 0.16 -1.0
317,465 - B158DRAFT_0314 0.20 -1.0
317,748 + B158DRAFT_0314 0.86 +1.0
317,756 - B158DRAFT_0314 0.88 -0.1
317,789 + -2.2
317,854 + -0.1
318,135 - B158DRAFT_0315 0.38 -0.2
318,135 - B158DRAFT_0315 0.38 -0.2
318,172 - B158DRAFT_0315 0.45 -0.1
318,177 + B158DRAFT_0315 0.45 -0.9
318,182 - B158DRAFT_0315 0.46 -1.0
318,305 + B158DRAFT_0315 0.69 -0.6
318,313 + B158DRAFT_0315 0.71 +0.6
318,329 + B158DRAFT_0315 0.74 +0.4
318,337 - B158DRAFT_0315 0.75 -0.0
318,421 + +0.2
318,487 - -0.7
318,589 - +1.2
318,589 - -0.9
318,724 + B158DRAFT_0316 0.24 -1.4
318,754 - B158DRAFT_0316 0.28 -0.2
318,966 + B158DRAFT_0316 0.54 +0.2
319,101 - B158DRAFT_0316 0.70 +0.4
319,141 + B158DRAFT_0316 0.75 -0.9
319,180 - B158DRAFT_0316 0.79 +1.6
319,180 - B158DRAFT_0316 0.79 -1.3
319,180 - B158DRAFT_0316 0.79 -1.0

Or see this region's nucleotide sequence