Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0159

Experiment: m.b. Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0157 and B158DRAFT_0158 are separated by 12 nucleotidesB158DRAFT_0158 and B158DRAFT_0159 are separated by 44 nucleotidesB158DRAFT_0159 and B158DRAFT_0160 are separated by 61 nucleotidesB158DRAFT_0160 and B158DRAFT_0161 overlap by 26 nucleotides B158DRAFT_0157: B158DRAFT_0157 - 3-dehydroquinate dehydratase (EC 4.2.1.10), at 155,345 to 155,785 _0157 B158DRAFT_0158: B158DRAFT_0158 - acetyl-CoA carboxylase, biotin carboxyl carrier protein, at 155,798 to 156,256 _0158 B158DRAFT_0159: B158DRAFT_0159 - acetyl-CoA carboxylase, biotin carboxylase subunit, at 156,301 to 157,650 _0159 B158DRAFT_0160: B158DRAFT_0160 - hypothetical protein, at 157,712 to 158,449 _0160 B158DRAFT_0161: B158DRAFT_0161 - hypothetical protein, at 158,424 to 159,074 _0161 Position (kb) 156 157 158Strain fitness (log2 ratio) -1 0 1 2at 157.616 kb on + strandat 157.651 kb on + strandat 157.656 kb on + strandat 157.659 kb on - strandat 157.659 kb on - strandat 157.659 kb on - strandat 157.659 kb on - strandat 157.659 kb on - strandat 157.659 kb on - strandat 157.673 kb on - strandat 157.674 kb on - strandat 157.719 kb on + strandat 157.860 kb on + strand, within B158DRAFT_0160at 157.860 kb on + strand, within B158DRAFT_0160at 157.868 kb on - strand, within B158DRAFT_0160at 157.944 kb on + strand, within B158DRAFT_0160at 157.944 kb on + strand, within B158DRAFT_0160at 157.944 kb on + strand, within B158DRAFT_0160at 157.944 kb on + strand, within B158DRAFT_0160at 157.944 kb on + strand, within B158DRAFT_0160at 157.952 kb on - strand, within B158DRAFT_0160at 157.952 kb on - strand, within B158DRAFT_0160at 158.058 kb on + strand, within B158DRAFT_0160at 158.058 kb on + strand, within B158DRAFT_0160at 158.058 kb on + strand, within B158DRAFT_0160at 158.058 kb on + strand, within B158DRAFT_0160at 158.058 kb on + strand, within B158DRAFT_0160at 158.066 kb on - strand, within B158DRAFT_0160at 158.066 kb on - strand, within B158DRAFT_0160at 158.066 kb on - strand, within B158DRAFT_0160at 158.066 kb on - strand, within B158DRAFT_0160at 158.229 kb on + strand, within B158DRAFT_0160at 158.255 kb on - strand, within B158DRAFT_0160at 158.263 kb on + strand, within B158DRAFT_0160at 158.299 kb on + strand, within B158DRAFT_0160at 158.314 kb on + strand, within B158DRAFT_0160at 158.360 kb on + strand, within B158DRAFT_0160at 158.360 kb on + strand, within B158DRAFT_0160at 158.440 kb on - strandat 158.512 kb on + strand, within B158DRAFT_0161at 158.512 kb on + strand, within B158DRAFT_0161at 158.512 kb on + strand, within B158DRAFT_0161at 158.512 kb on + strand, within B158DRAFT_0161at 158.512 kb on + strand, within B158DRAFT_0161at 158.512 kb on + strand, within B158DRAFT_0161at 158.520 kb on - strand, within B158DRAFT_0161at 158.520 kb on - strand, within B158DRAFT_0161at 158.520 kb on - strand, within B158DRAFT_0161at 158.520 kb on - strand, within B158DRAFT_0161at 158.520 kb on - strand, within B158DRAFT_0161at 158.520 kb on - strand, within B158DRAFT_0161at 158.611 kb on - strand, within B158DRAFT_0161

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM
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157,616 + +0.6
157,651 + -0.1
157,656 + -0.4
157,659 - +0.2
157,659 - -1.1
157,659 - -0.2
157,659 - -0.2
157,659 - -0.8
157,659 - -1.7
157,673 - -1.5
157,674 - -1.0
157,719 + -0.9
157,860 + B158DRAFT_0160 0.20 -0.2
157,860 + B158DRAFT_0160 0.20 -0.1
157,868 - B158DRAFT_0160 0.21 -0.1
157,944 + B158DRAFT_0160 0.31 +0.1
157,944 + B158DRAFT_0160 0.31 +1.8
157,944 + B158DRAFT_0160 0.31 +0.5
157,944 + B158DRAFT_0160 0.31 -0.8
157,944 + B158DRAFT_0160 0.31 -0.3
157,952 - B158DRAFT_0160 0.33 +0.1
157,952 - B158DRAFT_0160 0.33 +0.1
158,058 + B158DRAFT_0160 0.47 -0.1
158,058 + B158DRAFT_0160 0.47 +0.4
158,058 + B158DRAFT_0160 0.47 +1.7
158,058 + B158DRAFT_0160 0.47 +1.2
158,058 + B158DRAFT_0160 0.47 +0.1
158,066 - B158DRAFT_0160 0.48 -0.2
158,066 - B158DRAFT_0160 0.48 -0.3
158,066 - B158DRAFT_0160 0.48 +0.1
158,066 - B158DRAFT_0160 0.48 +0.1
158,229 + B158DRAFT_0160 0.70 -0.0
158,255 - B158DRAFT_0160 0.74 -0.3
158,263 + B158DRAFT_0160 0.75 -1.2
158,299 + B158DRAFT_0160 0.80 -0.2
158,314 + B158DRAFT_0160 0.82 +0.4
158,360 + B158DRAFT_0160 0.88 +0.1
158,360 + B158DRAFT_0160 0.88 -0.2
158,440 - -0.0
158,512 + B158DRAFT_0161 0.14 -0.2
158,512 + B158DRAFT_0161 0.14 +1.2
158,512 + B158DRAFT_0161 0.14 -0.0
158,512 + B158DRAFT_0161 0.14 -0.4
158,512 + B158DRAFT_0161 0.14 -0.2
158,512 + B158DRAFT_0161 0.14 +0.3
158,520 - B158DRAFT_0161 0.15 +0.2
158,520 - B158DRAFT_0161 0.15 +0.3
158,520 - B158DRAFT_0161 0.15 -0.6
158,520 - B158DRAFT_0161 0.15 +0.2
158,520 - B158DRAFT_0161 0.15 -0.0
158,520 - B158DRAFT_0161 0.15 -1.1
158,611 - B158DRAFT_0161 0.29 -1.0

Or see this region's nucleotide sequence