Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0116

Experiment: m.b. Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0115 and B158DRAFT_0116 are separated by 67 nucleotidesB158DRAFT_0116 and B158DRAFT_0117 overlap by 1 nucleotidesB158DRAFT_0117 and B158DRAFT_0118 overlap by 4 nucleotides B158DRAFT_0115: B158DRAFT_0115 - NADH dehydrogenase subunit M (EC 1.6.5.3), at 111,578 to 113,095 _0115 B158DRAFT_0116: B158DRAFT_0116 - NADH dehydrogenase subunit L (EC 1.6.5.3), at 113,163 to 115,181 _0116 B158DRAFT_0117: B158DRAFT_0117 - NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K), at 115,181 to 115,483 _0117 B158DRAFT_0118: B158DRAFT_0118 - NADH dehydrogenase subunit J (EC 1.6.5.3), at 115,480 to 116,160 _0118 Position (kb) 113 114 115 116Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7 8at 112.178 kb on - strand, within B158DRAFT_0115at 112.212 kb on + strand, within B158DRAFT_0115at 112.250 kb on + strand, within B158DRAFT_0115at 112.250 kb on + strand, within B158DRAFT_0115at 112.263 kb on - strand, within B158DRAFT_0115at 112.263 kb on - strand, within B158DRAFT_0115at 112.263 kb on - strand, within B158DRAFT_0115at 112.354 kb on + strand, within B158DRAFT_0115at 112.403 kb on + strand, within B158DRAFT_0115at 112.403 kb on + strand, within B158DRAFT_0115at 112.403 kb on + strand, within B158DRAFT_0115at 112.411 kb on - strand, within B158DRAFT_0115at 112.487 kb on + strand, within B158DRAFT_0115at 112.536 kb on + strand, within B158DRAFT_0115at 112.536 kb on + strand, within B158DRAFT_0115at 112.536 kb on + strand, within B158DRAFT_0115at 112.536 kb on + strand, within B158DRAFT_0115at 112.544 kb on - strand, within B158DRAFT_0115at 112.623 kb on + strand, within B158DRAFT_0115at 112.718 kb on - strand, within B158DRAFT_0115at 112.787 kb on + strand, within B158DRAFT_0115at 112.795 kb on - strand, within B158DRAFT_0115at 112.795 kb on - strand, within B158DRAFT_0115at 112.795 kb on - strand, within B158DRAFT_0115at 112.795 kb on - strand, within B158DRAFT_0115at 112.814 kb on + strand, within B158DRAFT_0115at 112.814 kb on + strand, within B158DRAFT_0115at 112.979 kb on - strandat 113.097 kb on + strandat 113.097 kb on + strandat 113.097 kb on + strandat 113.097 kb on + strandat 113.099 kb on + strandat 113.105 kb on - strandat 113.105 kb on - strandat 113.105 kb on - strandat 113.107 kb on - strandat 113.113 kb on - strandat 113.174 kb on + strandat 113.184 kb on + strandat 113.192 kb on - strandat 113.192 kb on - strandat 113.209 kb on + strandat 113.217 kb on - strandat 113.219 kb on + strandat 113.219 kb on + strandat 113.227 kb on - strandat 113.228 kb on - strandat 113.229 kb on - strandat 113.366 kb on - strand, within B158DRAFT_0116at 113.367 kb on - strand, within B158DRAFT_0116at 113.520 kb on + strand, within B158DRAFT_0116at 113.520 kb on + strand, within B158DRAFT_0116at 113.528 kb on - strand, within B158DRAFT_0116at 113.622 kb on - strand, within B158DRAFT_0116at 113.679 kb on + strand, within B158DRAFT_0116at 113.709 kb on + strand, within B158DRAFT_0116at 113.784 kb on - strand, within B158DRAFT_0116at 113.802 kb on + strand, within B158DRAFT_0116at 113.808 kb on - strand, within B158DRAFT_0116at 113.810 kb on - strand, within B158DRAFT_0116at 113.824 kb on - strand, within B158DRAFT_0116at 113.842 kb on - strand, within B158DRAFT_0116at 113.902 kb on + strand, within B158DRAFT_0116at 113.905 kb on - strand, within B158DRAFT_0116at 113.905 kb on - strand, within B158DRAFT_0116at 113.912 kb on - strand, within B158DRAFT_0116at 113.912 kb on - strand, within B158DRAFT_0116at 113.974 kb on + strand, within B158DRAFT_0116at 113.975 kb on - strand, within B158DRAFT_0116at 113.980 kb on + strand, within B158DRAFT_0116at 113.982 kb on + strand, within B158DRAFT_0116at 113.982 kb on - strand, within B158DRAFT_0116at 113.990 kb on - strand, within B158DRAFT_0116at 114.032 kb on + strand, within B158DRAFT_0116at 114.057 kb on + strand, within B158DRAFT_0116at 114.065 kb on - strand, within B158DRAFT_0116at 114.114 kb on - strand, within B158DRAFT_0116at 114.186 kb on + strand, within B158DRAFT_0116at 114.249 kb on + strand, within B158DRAFT_0116at 114.280 kb on + strand, within B158DRAFT_0116at 114.333 kb on + strand, within B158DRAFT_0116at 114.336 kb on - strand, within B158DRAFT_0116at 114.403 kb on + strand, within B158DRAFT_0116at 114.411 kb on - strand, within B158DRAFT_0116at 114.452 kb on - strand, within B158DRAFT_0116at 114.467 kb on - strand, within B158DRAFT_0116at 114.476 kb on - strand, within B158DRAFT_0116at 114.496 kb on - strand, within B158DRAFT_0116at 114.498 kb on + strand, within B158DRAFT_0116at 114.501 kb on - strand, within B158DRAFT_0116at 114.525 kb on + strand, within B158DRAFT_0116at 114.557 kb on + strand, within B158DRAFT_0116at 114.726 kb on + strand, within B158DRAFT_0116at 114.726 kb on + strand, within B158DRAFT_0116at 114.734 kb on - strand, within B158DRAFT_0116at 114.759 kb on - strand, within B158DRAFT_0116at 114.786 kb on + strand, within B158DRAFT_0116at 114.813 kb on + strand, within B158DRAFT_0116at 114.859 kb on - strand, within B158DRAFT_0116at 114.870 kb on + strand, within B158DRAFT_0116at 114.878 kb on + strand, within B158DRAFT_0116at 114.878 kb on + strand, within B158DRAFT_0116at 114.886 kb on - strand, within B158DRAFT_0116at 114.886 kb on - strand, within B158DRAFT_0116at 114.910 kb on - strand, within B158DRAFT_0116at 115.021 kb on + strandat 115.021 kb on + strandat 115.021 kb on + strandat 115.021 kb on + strandat 115.029 kb on - strandat 115.031 kb on + strandat 115.043 kb on + strandat 115.063 kb on - strandat 115.069 kb on + strandat 115.109 kb on - strandat 115.187 kb on - strandat 115.202 kb on - strandat 115.212 kb on - strand, within B158DRAFT_0117at 115.212 kb on - strand, within B158DRAFT_0117at 115.212 kb on - strand, within B158DRAFT_0117at 115.232 kb on + strand, within B158DRAFT_0117at 115.258 kb on - strand, within B158DRAFT_0117at 115.258 kb on - strand, within B158DRAFT_0117at 115.270 kb on + strand, within B158DRAFT_0117at 115.375 kb on + strand, within B158DRAFT_0117at 115.383 kb on - strand, within B158DRAFT_0117at 115.386 kb on - strand, within B158DRAFT_0117at 115.432 kb on + strand, within B158DRAFT_0117at 115.489 kb on - strandat 115.501 kb on - strandat 115.541 kb on + strandat 115.560 kb on + strand, within B158DRAFT_0118at 115.610 kb on + strand, within B158DRAFT_0118at 115.615 kb on + strand, within B158DRAFT_0118at 115.615 kb on + strand, within B158DRAFT_0118at 115.623 kb on - strand, within B158DRAFT_0118at 115.630 kb on + strand, within B158DRAFT_0118at 115.736 kb on + strand, within B158DRAFT_0118at 115.736 kb on + strand, within B158DRAFT_0118at 115.736 kb on + strand, within B158DRAFT_0118at 115.749 kb on + strand, within B158DRAFT_0118at 115.757 kb on + strand, within B158DRAFT_0118at 115.758 kb on - strand, within B158DRAFT_0118at 115.768 kb on + strand, within B158DRAFT_0118at 115.824 kb on - strand, within B158DRAFT_0118at 115.889 kb on - strand, within B158DRAFT_0118at 115.905 kb on + strand, within B158DRAFT_0118at 115.905 kb on + strand, within B158DRAFT_0118at 115.905 kb on + strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.915 kb on + strand, within B158DRAFT_0118at 115.954 kb on - strand, within B158DRAFT_0118at 115.973 kb on + strand, within B158DRAFT_0118at 115.978 kb on + strand, within B158DRAFT_0118at 115.981 kb on - strand, within B158DRAFT_0118at 115.981 kb on - strand, within B158DRAFT_0118at 115.981 kb on - strand, within B158DRAFT_0118at 116.031 kb on - strand, within B158DRAFT_0118at 116.059 kb on + strand, within B158DRAFT_0118at 116.067 kb on - strand, within B158DRAFT_0118at 116.090 kb on + strand, within B158DRAFT_0118at 116.098 kb on + strandat 116.119 kb on - strandat 116.155 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM
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112,178 - B158DRAFT_0115 0.40 +6.5
112,212 + B158DRAFT_0115 0.42 +5.6
112,250 + B158DRAFT_0115 0.44 +6.6
112,250 + B158DRAFT_0115 0.44 +6.8
112,263 - B158DRAFT_0115 0.45 +6.6
112,263 - B158DRAFT_0115 0.45 +6.4
112,263 - B158DRAFT_0115 0.45 +6.8
112,354 + B158DRAFT_0115 0.51 +6.1
112,403 + B158DRAFT_0115 0.54 +6.7
112,403 + B158DRAFT_0115 0.54 +5.4
112,403 + B158DRAFT_0115 0.54 +7.0
112,411 - B158DRAFT_0115 0.55 +6.4
112,487 + B158DRAFT_0115 0.60 +6.6
112,536 + B158DRAFT_0115 0.63 +5.5
112,536 + B158DRAFT_0115 0.63 +6.5
112,536 + B158DRAFT_0115 0.63 +6.5
112,536 + B158DRAFT_0115 0.63 +7.2
112,544 - B158DRAFT_0115 0.64 +5.8
112,623 + B158DRAFT_0115 0.69 +6.9
112,718 - B158DRAFT_0115 0.75 +7.3
112,787 + B158DRAFT_0115 0.80 +6.8
112,795 - B158DRAFT_0115 0.80 +7.0
112,795 - B158DRAFT_0115 0.80 +7.0
112,795 - B158DRAFT_0115 0.80 +7.4
112,795 - B158DRAFT_0115 0.80 +6.8
112,814 + B158DRAFT_0115 0.81 +4.7
112,814 + B158DRAFT_0115 0.81 +6.9
112,979 - +7.8
113,097 + +6.6
113,097 + +7.2
113,097 + +6.7
113,097 + +7.2
113,099 + +7.0
113,105 - -1.9
113,105 - +1.1
113,105 - +1.5
113,107 - +0.5
113,113 - -0.9
113,174 + +6.4
113,184 + +6.8
113,192 - +0.8
113,192 - +0.3
113,209 + +7.3
113,217 - +5.6
113,219 + +6.4
113,219 + +7.0
113,227 - +5.6
113,228 - +5.8
113,229 - +5.4
113,366 - B158DRAFT_0116 0.10 +5.6
113,367 - B158DRAFT_0116 0.10 +5.6
113,520 + B158DRAFT_0116 0.18 +7.1
113,520 + B158DRAFT_0116 0.18 +6.6
113,528 - B158DRAFT_0116 0.18 +5.3
113,622 - B158DRAFT_0116 0.23 +6.7
113,679 + B158DRAFT_0116 0.26 +5.6
113,709 + B158DRAFT_0116 0.27 +6.6
113,784 - B158DRAFT_0116 0.31 +5.4
113,802 + B158DRAFT_0116 0.32 +6.6
113,808 - B158DRAFT_0116 0.32 +6.7
113,810 - B158DRAFT_0116 0.32 +6.4
113,824 - B158DRAFT_0116 0.33 +5.0
113,842 - B158DRAFT_0116 0.34 +6.0
113,902 + B158DRAFT_0116 0.37 +5.7
113,905 - B158DRAFT_0116 0.37 +6.7
113,905 - B158DRAFT_0116 0.37 +5.4
113,912 - B158DRAFT_0116 0.37 +6.8
113,912 - B158DRAFT_0116 0.37 +5.6
113,974 + B158DRAFT_0116 0.40 +5.9
113,975 - B158DRAFT_0116 0.40 +6.4
113,980 + B158DRAFT_0116 0.40 +6.7
113,982 + B158DRAFT_0116 0.41 +3.7
113,982 - B158DRAFT_0116 0.41 +6.3
113,990 - B158DRAFT_0116 0.41 +6.2
114,032 + B158DRAFT_0116 0.43 +5.2
114,057 + B158DRAFT_0116 0.44 +6.5
114,065 - B158DRAFT_0116 0.45 +5.9
114,114 - B158DRAFT_0116 0.47 +5.3
114,186 + B158DRAFT_0116 0.51 +7.1
114,249 + B158DRAFT_0116 0.54 +7.1
114,280 + B158DRAFT_0116 0.55 +4.8
114,333 + B158DRAFT_0116 0.58 +5.7
114,336 - B158DRAFT_0116 0.58 +7.0
114,403 + B158DRAFT_0116 0.61 +6.7
114,411 - B158DRAFT_0116 0.62 +6.9
114,452 - B158DRAFT_0116 0.64 +6.7
114,467 - B158DRAFT_0116 0.65 +7.5
114,476 - B158DRAFT_0116 0.65 +7.4
114,496 - B158DRAFT_0116 0.66 +6.4
114,498 + B158DRAFT_0116 0.66 +6.6
114,501 - B158DRAFT_0116 0.66 +6.2
114,525 + B158DRAFT_0116 0.67 +5.5
114,557 + B158DRAFT_0116 0.69 +6.4
114,726 + B158DRAFT_0116 0.77 +6.1
114,726 + B158DRAFT_0116 0.77 +7.0
114,734 - B158DRAFT_0116 0.78 +6.5
114,759 - B158DRAFT_0116 0.79 +7.0
114,786 + B158DRAFT_0116 0.80 +6.2
114,813 + B158DRAFT_0116 0.82 +6.0
114,859 - B158DRAFT_0116 0.84 +6.4
114,870 + B158DRAFT_0116 0.85 +6.9
114,878 + B158DRAFT_0116 0.85 +6.3
114,878 + B158DRAFT_0116 0.85 +7.2
114,886 - B158DRAFT_0116 0.85 +6.9
114,886 - B158DRAFT_0116 0.85 +6.3
114,910 - B158DRAFT_0116 0.87 +6.3
115,021 + +5.4
115,021 + +6.2
115,021 + +6.0
115,021 + +6.5
115,029 - +7.1
115,031 + +6.9
115,043 + +7.3
115,063 - +7.4
115,069 + +8.1
115,109 - +7.0
115,187 - +1.9
115,202 - +2.5
115,212 - B158DRAFT_0117 0.10 +0.7
115,212 - B158DRAFT_0117 0.10 +0.7
115,212 - B158DRAFT_0117 0.10 +0.9
115,232 + B158DRAFT_0117 0.17 +7.4
115,258 - B158DRAFT_0117 0.25 +6.9
115,258 - B158DRAFT_0117 0.25 +6.2
115,270 + B158DRAFT_0117 0.29 +7.6
115,375 + B158DRAFT_0117 0.64 +6.1
115,383 - B158DRAFT_0117 0.67 +5.9
115,386 - B158DRAFT_0117 0.68 +6.5
115,432 + B158DRAFT_0117 0.83 +6.8
115,489 - +0.8
115,501 - +0.6
115,541 + +7.0
115,560 + B158DRAFT_0118 0.12 +6.6
115,610 + B158DRAFT_0118 0.19 +6.5
115,615 + B158DRAFT_0118 0.20 +6.8
115,615 + B158DRAFT_0118 0.20 +6.6
115,623 - B158DRAFT_0118 0.21 +4.6
115,630 + B158DRAFT_0118 0.22 +4.2
115,736 + B158DRAFT_0118 0.38 +6.5
115,736 + B158DRAFT_0118 0.38 +6.5
115,736 + B158DRAFT_0118 0.38 +6.0
115,749 + B158DRAFT_0118 0.40 +6.4
115,757 + B158DRAFT_0118 0.41 +6.9
115,758 - B158DRAFT_0118 0.41 +6.7
115,768 + B158DRAFT_0118 0.42 +5.3
115,824 - B158DRAFT_0118 0.51 +6.5
115,889 - B158DRAFT_0118 0.60 +6.7
115,905 + B158DRAFT_0118 0.62 +6.5
115,905 + B158DRAFT_0118 0.62 +6.5
115,905 + B158DRAFT_0118 0.62 +6.7
115,913 - B158DRAFT_0118 0.64 +7.0
115,913 - B158DRAFT_0118 0.64 +7.5
115,913 - B158DRAFT_0118 0.64 +6.3
115,913 - B158DRAFT_0118 0.64 +7.0
115,915 + B158DRAFT_0118 0.64 +6.4
115,954 - B158DRAFT_0118 0.70 +3.3
115,973 + B158DRAFT_0118 0.72 +6.3
115,978 + B158DRAFT_0118 0.73 +6.7
115,981 - B158DRAFT_0118 0.74 +6.4
115,981 - B158DRAFT_0118 0.74 +6.4
115,981 - B158DRAFT_0118 0.74 +4.9
116,031 - B158DRAFT_0118 0.81 +6.4
116,059 + B158DRAFT_0118 0.85 +6.1
116,067 - B158DRAFT_0118 0.86 +6.9
116,090 + B158DRAFT_0118 0.90 +7.2
116,098 + +6.3
116,119 - +7.3
116,155 + +5.7

Or see this region's nucleotide sequence