Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2437 and B158DRAFT_2438 overlap by 30 nucleotides B158DRAFT_2438 and B158DRAFT_2439 are separated by 148 nucleotides B158DRAFT_2439 and B158DRAFT_2440 are separated by 23 nucleotides
B158DRAFT_2437: B158DRAFT_2437 - Predicted membrane protein, at 608,686 to 609,885
_2437
B158DRAFT_2438: B158DRAFT_2438 - hypothetical protein, at 609,856 to 611,433
_2438
B158DRAFT_2439: B158DRAFT_2439 - Peroxiredoxin, at 611,582 to 612,043
_2439
B158DRAFT_2440: B158DRAFT_2440 - Putative Zn-dependent protease, contains TPR repeats, at 612,067 to 613,566
_2440
Position (kb) 609
610
611
612 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 608.877 kb on + strand, within B158DRAFT_2437 at 608.885 kb on + strand, within B158DRAFT_2437 at 608.909 kb on - strand, within B158DRAFT_2437 at 608.912 kb on + strand, within B158DRAFT_2437 at 609.056 kb on + strand, within B158DRAFT_2437 at 609.056 kb on + strand, within B158DRAFT_2437 at 609.056 kb on + strand, within B158DRAFT_2437 at 609.056 kb on + strand, within B158DRAFT_2437 at 609.056 kb on + strand, within B158DRAFT_2437 at 609.056 kb on + strand, within B158DRAFT_2437 at 609.056 kb on + strand, within B158DRAFT_2437 at 609.056 kb on + strand, within B158DRAFT_2437 at 609.064 kb on - strand, within B158DRAFT_2437 at 609.064 kb on - strand, within B158DRAFT_2437 at 609.064 kb on - strand, within B158DRAFT_2437 at 609.066 kb on + strand, within B158DRAFT_2437 at 609.163 kb on + strand, within B158DRAFT_2437 at 609.163 kb on + strand, within B158DRAFT_2437 at 609.171 kb on - strand, within B158DRAFT_2437 at 609.171 kb on - strand, within B158DRAFT_2437 at 609.171 kb on - strand, within B158DRAFT_2437 at 609.171 kb on - strand, within B158DRAFT_2437 at 609.187 kb on + strand, within B158DRAFT_2437 at 609.249 kb on - strand, within B158DRAFT_2437 at 609.268 kb on - strand, within B158DRAFT_2437 at 609.428 kb on - strand, within B158DRAFT_2437 at 609.434 kb on + strand, within B158DRAFT_2437 at 609.439 kb on + strand, within B158DRAFT_2437 at 609.472 kb on - strand, within B158DRAFT_2437 at 609.472 kb on - strand, within B158DRAFT_2437 at 609.521 kb on - strand, within B158DRAFT_2437 at 609.542 kb on + strand, within B158DRAFT_2437 at 609.542 kb on + strand, within B158DRAFT_2437 at 609.625 kb on + strand, within B158DRAFT_2437 at 609.635 kb on + strand, within B158DRAFT_2437 at 609.643 kb on - strand, within B158DRAFT_2437 at 609.729 kb on + strand, within B158DRAFT_2437 at 609.896 kb on + strand at 609.917 kb on - strand at 609.931 kb on - strand at 610.017 kb on + strand, within B158DRAFT_2438 at 610.017 kb on + strand, within B158DRAFT_2438 at 610.025 kb on - strand, within B158DRAFT_2438 at 610.055 kb on + strand, within B158DRAFT_2438 at 610.055 kb on + strand, within B158DRAFT_2438 at 610.063 kb on - strand, within B158DRAFT_2438 at 610.063 kb on - strand, within B158DRAFT_2438 at 610.096 kb on - strand, within B158DRAFT_2438 at 610.096 kb on - strand, within B158DRAFT_2438 at 610.124 kb on + strand, within B158DRAFT_2438 at 610.209 kb on + strand, within B158DRAFT_2438 at 610.281 kb on + strand, within B158DRAFT_2438 at 610.372 kb on + strand, within B158DRAFT_2438 at 610.417 kb on - strand, within B158DRAFT_2438 at 610.457 kb on + strand, within B158DRAFT_2438 at 610.457 kb on + strand, within B158DRAFT_2438 at 610.541 kb on + strand, within B158DRAFT_2438 at 610.592 kb on + strand, within B158DRAFT_2438 at 610.600 kb on - strand, within B158DRAFT_2438 at 610.610 kb on - strand, within B158DRAFT_2438 at 610.791 kb on + strand, within B158DRAFT_2438 at 610.799 kb on - strand, within B158DRAFT_2438 at 610.963 kb on + strand, within B158DRAFT_2438 at 610.963 kb on + strand, within B158DRAFT_2438 at 611.113 kb on + strand, within B158DRAFT_2438 at 611.125 kb on + strand, within B158DRAFT_2438 at 611.141 kb on + strand, within B158DRAFT_2438 at 611.163 kb on + strand, within B158DRAFT_2438 at 611.189 kb on + strand, within B158DRAFT_2438 at 611.274 kb on + strand, within B158DRAFT_2438 at 611.293 kb on + strand at 611.299 kb on - strand at 611.299 kb on - strand at 611.299 kb on - strand at 611.301 kb on - strand at 611.301 kb on - strand at 611.340 kb on + strand at 611.377 kb on - strand at 611.386 kb on + strand at 611.386 kb on + strand at 611.386 kb on + strand at 611.394 kb on - strand at 611.394 kb on - strand at 611.394 kb on - strand at 611.394 kb on - strand at 611.394 kb on - strand at 611.394 kb on - strand at 611.404 kb on - strand at 611.416 kb on - strand at 611.419 kb on - strand at 611.419 kb on - strand at 611.429 kb on + strand at 611.437 kb on - strand at 611.476 kb on - strand at 611.482 kb on + strand at 611.482 kb on + strand at 611.482 kb on + strand at 611.482 kb on + strand at 611.490 kb on - strand at 611.645 kb on - strand, within B158DRAFT_2439 at 611.725 kb on - strand, within B158DRAFT_2439 at 611.728 kb on - strand, within B158DRAFT_2439 at 611.784 kb on + strand, within B158DRAFT_2439 at 611.792 kb on - strand, within B158DRAFT_2439 at 611.833 kb on - strand, within B158DRAFT_2439 at 612.050 kb on - strand at 612.064 kb on + strand at 612.064 kb on + strand at 612.072 kb on - strand at 612.072 kb on - strand at 612.072 kb on - strand at 612.072 kb on - strand at 612.133 kb on + strand at 612.133 kb on + strand at 612.133 kb on + strand at 612.141 kb on - strand at 612.161 kb on + strand at 612.161 kb on + strand at 612.161 kb on + strand at 612.179 kb on - strand at 612.223 kb on - strand, within B158DRAFT_2440 at 612.223 kb on - strand, within B158DRAFT_2440 at 612.235 kb on + strand, within B158DRAFT_2440 at 612.241 kb on + strand, within B158DRAFT_2440 at 612.241 kb on + strand, within B158DRAFT_2440 at 612.241 kb on + strand, within B158DRAFT_2440 at 612.241 kb on + strand, within B158DRAFT_2440 at 612.241 kb on + strand, within B158DRAFT_2440 at 612.248 kb on - strand, within B158DRAFT_2440 at 612.249 kb on - strand, within B158DRAFT_2440 at 612.249 kb on - strand, within B158DRAFT_2440 at 612.249 kb on - strand, within B158DRAFT_2440 at 612.249 kb on - strand, within B158DRAFT_2440 at 612.249 kb on - strand, within B158DRAFT_2440 at 612.270 kb on - strand, within B158DRAFT_2440 at 612.270 kb on - strand, within B158DRAFT_2440 at 612.270 kb on - strand, within B158DRAFT_2440 at 612.270 kb on - strand, within B158DRAFT_2440 at 612.281 kb on + strand, within B158DRAFT_2440 at 612.281 kb on + strand, within B158DRAFT_2440 at 612.281 kb on + strand, within B158DRAFT_2440 at 612.281 kb on + strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.294 kb on - strand, within B158DRAFT_2440 at 612.368 kb on + strand, within B158DRAFT_2440 at 612.368 kb on + strand, within B158DRAFT_2440 at 612.376 kb on - strand, within B158DRAFT_2440 at 612.402 kb on - strand, within B158DRAFT_2440
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 608,877 + B158DRAFT_2437 0.16 +1.3 608,885 + B158DRAFT_2437 0.17 -0.7 608,909 - B158DRAFT_2437 0.19 -4.7 608,912 + B158DRAFT_2437 0.19 +0.3 609,056 + B158DRAFT_2437 0.31 -1.2 609,056 + B158DRAFT_2437 0.31 -0.5 609,056 + B158DRAFT_2437 0.31 -1.5 609,056 + B158DRAFT_2437 0.31 -0.4 609,056 + B158DRAFT_2437 0.31 +1.0 609,056 + B158DRAFT_2437 0.31 -0.9 609,056 + B158DRAFT_2437 0.31 -0.6 609,056 + B158DRAFT_2437 0.31 -2.5 609,064 - B158DRAFT_2437 0.32 -0.6 609,064 - B158DRAFT_2437 0.32 -1.3 609,064 - B158DRAFT_2437 0.32 -0.5 609,066 + B158DRAFT_2437 0.32 +0.2 609,163 + B158DRAFT_2437 0.40 +0.7 609,163 + B158DRAFT_2437 0.40 -3.9 609,171 - B158DRAFT_2437 0.40 -0.9 609,171 - B158DRAFT_2437 0.40 -0.8 609,171 - B158DRAFT_2437 0.40 -0.1 609,171 - B158DRAFT_2437 0.40 +1.3 609,187 + B158DRAFT_2437 0.42 +0.4 609,249 - B158DRAFT_2437 0.47 -4.9 609,268 - B158DRAFT_2437 0.48 +1.5 609,428 - B158DRAFT_2437 0.62 +0.1 609,434 + B158DRAFT_2437 0.62 -2.3 609,439 + B158DRAFT_2437 0.63 +0.0 609,472 - B158DRAFT_2437 0.66 +1.6 609,472 - B158DRAFT_2437 0.66 +0.0 609,521 - B158DRAFT_2437 0.70 -3.9 609,542 + B158DRAFT_2437 0.71 +0.4 609,542 + B158DRAFT_2437 0.71 +0.5 609,625 + B158DRAFT_2437 0.78 -0.2 609,635 + B158DRAFT_2437 0.79 -3.1 609,643 - B158DRAFT_2437 0.80 +1.2 609,729 + B158DRAFT_2437 0.87 -0.5 609,896 + -2.8 609,917 - -2.1 609,931 - -1.0 610,017 + B158DRAFT_2438 0.10 -4.2 610,017 + B158DRAFT_2438 0.10 -0.5 610,025 - B158DRAFT_2438 0.11 +0.2 610,055 + B158DRAFT_2438 0.13 -0.5 610,055 + B158DRAFT_2438 0.13 +0.6 610,063 - B158DRAFT_2438 0.13 -0.5 610,063 - B158DRAFT_2438 0.13 -0.3 610,096 - B158DRAFT_2438 0.15 -0.3 610,096 - B158DRAFT_2438 0.15 -0.3 610,124 + B158DRAFT_2438 0.17 +0.8 610,209 + B158DRAFT_2438 0.22 +0.6 610,281 + B158DRAFT_2438 0.27 +1.9 610,372 + B158DRAFT_2438 0.33 -0.7 610,417 - B158DRAFT_2438 0.36 -0.2 610,457 + B158DRAFT_2438 0.38 -3.4 610,457 + B158DRAFT_2438 0.38 +0.1 610,541 + B158DRAFT_2438 0.43 +0.4 610,592 + B158DRAFT_2438 0.47 -0.1 610,600 - B158DRAFT_2438 0.47 +0.2 610,610 - B158DRAFT_2438 0.48 +1.3 610,791 + B158DRAFT_2438 0.59 -0.2 610,799 - B158DRAFT_2438 0.60 -0.3 610,963 + B158DRAFT_2438 0.70 -0.0 610,963 + B158DRAFT_2438 0.70 +0.6 611,113 + B158DRAFT_2438 0.80 -3.5 611,125 + B158DRAFT_2438 0.80 -0.4 611,141 + B158DRAFT_2438 0.81 +0.6 611,163 + B158DRAFT_2438 0.83 +1.7 611,189 + B158DRAFT_2438 0.84 -2.3 611,274 + B158DRAFT_2438 0.90 -4.7 611,293 + -0.1 611,299 - +0.3 611,299 - +0.4 611,299 - -0.8 611,301 - +1.1 611,301 - +0.7 611,340 + -4.4 611,377 - +0.4 611,386 + +1.0 611,386 + -0.6 611,386 + -1.9 611,394 - -1.0 611,394 - -1.1 611,394 - -0.1 611,394 - +0.2 611,394 - +0.4 611,394 - +0.1 611,404 - +0.3 611,416 - -0.2 611,419 - -0.3 611,419 - -1.2 611,429 + -0.2 611,437 - -2.0 611,476 - -1.1 611,482 + -2.7 611,482 + -0.2 611,482 + +0.1 611,482 + -0.2 611,490 - -0.7 611,645 - B158DRAFT_2439 0.14 -1.0 611,725 - B158DRAFT_2439 0.31 +0.2 611,728 - B158DRAFT_2439 0.32 -0.7 611,784 + B158DRAFT_2439 0.44 -1.0 611,792 - B158DRAFT_2439 0.45 +0.4 611,833 - B158DRAFT_2439 0.54 -2.6 612,050 - -1.0 612,064 + -0.8 612,064 + -2.2 612,072 - +0.2 612,072 - +0.6 612,072 - -0.8 612,072 - -2.0 612,133 + -0.3 612,133 + -0.0 612,133 + +0.6 612,141 - -0.1 612,161 + +0.7 612,161 + -2.6 612,161 + +0.5 612,179 - +0.7 612,223 - B158DRAFT_2440 0.10 +0.0 612,223 - B158DRAFT_2440 0.10 +0.7 612,235 + B158DRAFT_2440 0.11 +0.8 612,241 + B158DRAFT_2440 0.12 -0.1 612,241 + B158DRAFT_2440 0.12 +0.1 612,241 + B158DRAFT_2440 0.12 +0.4 612,241 + B158DRAFT_2440 0.12 -0.2 612,241 + B158DRAFT_2440 0.12 +0.3 612,248 - B158DRAFT_2440 0.12 -0.7 612,249 - B158DRAFT_2440 0.12 -0.8 612,249 - B158DRAFT_2440 0.12 -0.2 612,249 - B158DRAFT_2440 0.12 +0.6 612,249 - B158DRAFT_2440 0.12 +1.3 612,249 - B158DRAFT_2440 0.12 -4.1 612,270 - B158DRAFT_2440 0.14 -0.4 612,270 - B158DRAFT_2440 0.14 +0.4 612,270 - B158DRAFT_2440 0.14 -0.2 612,270 - B158DRAFT_2440 0.14 -4.7 612,281 + B158DRAFT_2440 0.14 +1.1 612,281 + B158DRAFT_2440 0.14 -0.5 612,281 + B158DRAFT_2440 0.14 +0.7 612,281 + B158DRAFT_2440 0.14 +0.4 612,289 - B158DRAFT_2440 0.15 +0.4 612,289 - B158DRAFT_2440 0.15 +4.1 612,289 - B158DRAFT_2440 0.15 +1.4 612,289 - B158DRAFT_2440 0.15 +0.5 612,289 - B158DRAFT_2440 0.15 -2.7 612,289 - B158DRAFT_2440 0.15 +0.4 612,289 - B158DRAFT_2440 0.15 +0.1 612,289 - B158DRAFT_2440 0.15 -2.2 612,294 - B158DRAFT_2440 0.15 +0.7 612,368 + B158DRAFT_2440 0.20 -1.1 612,368 + B158DRAFT_2440 0.20 -0.3 612,376 - B158DRAFT_2440 0.21 +1.8 612,402 - B158DRAFT_2440 0.22 -0.0
Or see this region's nucleotide sequence