Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2416 and B158DRAFT_2417 are separated by 2 nucleotides B158DRAFT_2417 and B158DRAFT_2418 are separated by 171 nucleotides B158DRAFT_2418 and B158DRAFT_2419 overlap by 4 nucleotides B158DRAFT_2419 and B158DRAFT_2420 overlap by 4 nucleotides
B158DRAFT_2416: B158DRAFT_2416 - prepilin-type N-terminal cleavage/methylation domain, at 588,968 to 589,417
_2416
B158DRAFT_2417: B158DRAFT_2417 - prepilin-type N-terminal cleavage/methylation domain, at 589,420 to 589,827
_2417
B158DRAFT_2418: B158DRAFT_2418 - Tfp pilus assembly protein FimT, at 589,999 to 590,562
_2418
B158DRAFT_2419: B158DRAFT_2419 - type IV pilus modification protein PilV, at 590,559 to 591,152
_2419
B158DRAFT_2420: B158DRAFT_2420 - prepilin-type N-terminal cleavage/methylation domain, at 591,149 to 591,949
_2420
Position (kb) 589
590
591 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 589.247 kb on - strand, within B158DRAFT_2416 at 589.329 kb on + strand, within B158DRAFT_2416 at 589.337 kb on - strand, within B158DRAFT_2416 at 589.547 kb on + strand, within B158DRAFT_2417 at 589.596 kb on + strand, within B158DRAFT_2417 at 589.596 kb on + strand, within B158DRAFT_2417 at 589.596 kb on + strand, within B158DRAFT_2417 at 589.596 kb on - strand, within B158DRAFT_2417 at 589.604 kb on - strand, within B158DRAFT_2417 at 589.688 kb on - strand, within B158DRAFT_2417 at 589.688 kb on - strand, within B158DRAFT_2417 at 589.805 kb on - strand at 589.850 kb on + strand at 589.960 kb on - strand at 589.996 kb on + strand at 590.175 kb on + strand, within B158DRAFT_2418 at 590.185 kb on + strand, within B158DRAFT_2418 at 590.193 kb on - strand, within B158DRAFT_2418 at 590.193 kb on - strand, within B158DRAFT_2418 at 590.246 kb on + strand, within B158DRAFT_2418 at 590.271 kb on + strand, within B158DRAFT_2418 at 590.271 kb on + strand, within B158DRAFT_2418 at 590.326 kb on - strand, within B158DRAFT_2418 at 590.441 kb on + strand, within B158DRAFT_2418 at 590.441 kb on + strand, within B158DRAFT_2418 at 590.441 kb on + strand, within B158DRAFT_2418 at 590.441 kb on + strand, within B158DRAFT_2418 at 590.449 kb on - strand, within B158DRAFT_2418 at 590.543 kb on + strand at 590.574 kb on + strand at 590.582 kb on - strand at 590.582 kb on - strand at 590.633 kb on + strand, within B158DRAFT_2419 at 590.704 kb on + strand, within B158DRAFT_2419 at 590.744 kb on + strand, within B158DRAFT_2419 at 590.872 kb on + strand, within B158DRAFT_2419 at 591.006 kb on - strand, within B158DRAFT_2419 at 591.246 kb on - strand, within B158DRAFT_2420 at 591.359 kb on + strand, within B158DRAFT_2420 at 591.367 kb on - strand, within B158DRAFT_2420 at 591.380 kb on + strand, within B158DRAFT_2420 at 591.421 kb on + strand, within B158DRAFT_2420 at 591.520 kb on + strand, within B158DRAFT_2420 at 591.522 kb on + strand, within B158DRAFT_2420 at 591.522 kb on + strand, within B158DRAFT_2420 at 591.522 kb on + strand, within B158DRAFT_2420 at 591.530 kb on - strand, within B158DRAFT_2420 at 591.530 kb on - strand, within B158DRAFT_2420 at 591.543 kb on - strand, within B158DRAFT_2420
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 589,247 - B158DRAFT_2416 0.62 -0.3 589,329 + B158DRAFT_2416 0.80 -0.6 589,337 - B158DRAFT_2416 0.82 -0.7 589,547 + B158DRAFT_2417 0.31 -3.5 589,596 + B158DRAFT_2417 0.43 -0.2 589,596 + B158DRAFT_2417 0.43 +0.4 589,596 + B158DRAFT_2417 0.43 +0.2 589,596 - B158DRAFT_2417 0.43 +0.3 589,604 - B158DRAFT_2417 0.45 +0.2 589,688 - B158DRAFT_2417 0.66 +0.7 589,688 - B158DRAFT_2417 0.66 -4.9 589,805 - +2.2 589,850 + -0.3 589,960 - -0.9 589,996 + -0.4 590,175 + B158DRAFT_2418 0.31 -3.9 590,185 + B158DRAFT_2418 0.33 +0.3 590,193 - B158DRAFT_2418 0.34 -2.4 590,193 - B158DRAFT_2418 0.34 -1.4 590,246 + B158DRAFT_2418 0.44 +0.6 590,271 + B158DRAFT_2418 0.48 -0.9 590,271 + B158DRAFT_2418 0.48 -0.7 590,326 - B158DRAFT_2418 0.58 +0.4 590,441 + B158DRAFT_2418 0.78 -0.5 590,441 + B158DRAFT_2418 0.78 -0.2 590,441 + B158DRAFT_2418 0.78 -0.3 590,441 + B158DRAFT_2418 0.78 -1.0 590,449 - B158DRAFT_2418 0.80 -1.4 590,543 + -0.3 590,574 + -0.8 590,582 - -1.0 590,582 - -0.8 590,633 + B158DRAFT_2419 0.12 +1.5 590,704 + B158DRAFT_2419 0.24 +1.7 590,744 + B158DRAFT_2419 0.31 -0.4 590,872 + B158DRAFT_2419 0.53 +0.3 591,006 - B158DRAFT_2419 0.75 +0.3 591,246 - B158DRAFT_2420 0.12 -3.7 591,359 + B158DRAFT_2420 0.26 -0.6 591,367 - B158DRAFT_2420 0.27 -0.8 591,380 + B158DRAFT_2420 0.29 -1.0 591,421 + B158DRAFT_2420 0.34 +0.2 591,520 + B158DRAFT_2420 0.46 +0.7 591,522 + B158DRAFT_2420 0.47 -3.8 591,522 + B158DRAFT_2420 0.47 -2.3 591,522 + B158DRAFT_2420 0.47 -3.6 591,530 - B158DRAFT_2420 0.48 +0.6 591,530 - B158DRAFT_2420 0.48 +0.4 591,543 - B158DRAFT_2420 0.49 -5.7
Or see this region's nucleotide sequence