Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2195 and B158DRAFT_2196 are separated by 291 nucleotides B158DRAFT_2196 and B158DRAFT_2197 overlap by 1 nucleotides B158DRAFT_2197 and B158DRAFT_2198 overlap by 1 nucleotides B158DRAFT_2198 and B158DRAFT_2199 overlap by 53 nucleotides
B158DRAFT_2195: B158DRAFT_2195 - Predicted aminopeptidases, at 340,164 to 341,558
_2195
B158DRAFT_2196: B158DRAFT_2196 - multisubunit sodium/proton antiporter, MrpE subunit (TC 2.A.63.1), at 341,850 to 342,335
_2196
B158DRAFT_2197: B158DRAFT_2197 - multisubunit sodium/proton antiporter, MrpF subunit (TC 2.A.63.1), at 342,335 to 342,610
_2197
B158DRAFT_2198: B158DRAFT_2198 - multisubunit sodium/proton antiporter, MrpG subunit (TC 2.A.63.1), at 342,610 to 342,981
_2198
B158DRAFT_2199: B158DRAFT_2199 - multisubunit sodium/proton antiporter, MrpB subunit (TC 2.A.63.1), at 342,929 to 343,996
_2199
Position (kb) 342
343 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 341.355 kb on + strand, within B158DRAFT_2195 at 341.355 kb on + strand, within B158DRAFT_2195 at 341.355 kb on + strand, within B158DRAFT_2195 at 341.355 kb on + strand, within B158DRAFT_2195 at 341.355 kb on + strand, within B158DRAFT_2195 at 341.363 kb on - strand, within B158DRAFT_2195 at 341.363 kb on - strand, within B158DRAFT_2195 at 341.363 kb on - strand, within B158DRAFT_2195 at 341.363 kb on - strand, within B158DRAFT_2195 at 341.410 kb on + strand, within B158DRAFT_2195 at 341.413 kb on - strand, within B158DRAFT_2195 at 341.432 kb on + strand at 341.440 kb on - strand at 341.440 kb on - strand at 341.473 kb on + strand at 341.533 kb on - strand at 341.726 kb on + strand at 341.734 kb on - strand at 341.741 kb on + strand at 341.805 kb on + strand at 341.883 kb on - strand at 341.903 kb on + strand, within B158DRAFT_2196 at 341.940 kb on + strand, within B158DRAFT_2196 at 342.205 kb on + strand, within B158DRAFT_2196 at 342.205 kb on + strand, within B158DRAFT_2196 at 342.213 kb on - strand, within B158DRAFT_2196 at 342.228 kb on - strand, within B158DRAFT_2196 at 342.402 kb on + strand, within B158DRAFT_2197 at 342.470 kb on + strand, within B158DRAFT_2197 at 342.470 kb on + strand, within B158DRAFT_2197 at 342.478 kb on - strand, within B158DRAFT_2197 at 342.478 kb on - strand, within B158DRAFT_2197 at 342.517 kb on + strand, within B158DRAFT_2197 at 342.555 kb on - strand, within B158DRAFT_2197 at 342.682 kb on + strand, within B158DRAFT_2198 at 342.899 kb on + strand, within B158DRAFT_2198 at 342.954 kb on + strand at 343.225 kb on - strand, within B158DRAFT_2199 at 343.225 kb on - strand, within B158DRAFT_2199 at 343.363 kb on - strand, within B158DRAFT_2199
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 341,355 + B158DRAFT_2195 0.85 -0.8 341,355 + B158DRAFT_2195 0.85 +0.1 341,355 + B158DRAFT_2195 0.85 +0.2 341,355 + B158DRAFT_2195 0.85 -0.8 341,355 + B158DRAFT_2195 0.85 -0.1 341,363 - B158DRAFT_2195 0.86 -0.5 341,363 - B158DRAFT_2195 0.86 -0.1 341,363 - B158DRAFT_2195 0.86 -1.0 341,363 - B158DRAFT_2195 0.86 +0.1 341,410 + B158DRAFT_2195 0.89 -0.2 341,413 - B158DRAFT_2195 0.90 -2.7 341,432 + +0.0 341,440 - +2.3 341,440 - -1.6 341,473 + -0.5 341,533 - -0.1 341,726 + +1.1 341,734 - -0.1 341,741 + -1.0 341,805 + +0.5 341,883 - -1.1 341,903 + B158DRAFT_2196 0.11 +2.1 341,940 + B158DRAFT_2196 0.19 -1.4 342,205 + B158DRAFT_2196 0.73 +0.7 342,205 + B158DRAFT_2196 0.73 -0.4 342,213 - B158DRAFT_2196 0.75 +0.3 342,228 - B158DRAFT_2196 0.78 +0.8 342,402 + B158DRAFT_2197 0.24 -0.3 342,470 + B158DRAFT_2197 0.49 -0.6 342,470 + B158DRAFT_2197 0.49 +1.8 342,478 - B158DRAFT_2197 0.52 +0.3 342,478 - B158DRAFT_2197 0.52 +0.5 342,517 + B158DRAFT_2197 0.66 -0.3 342,555 - B158DRAFT_2197 0.80 -0.0 342,682 + B158DRAFT_2198 0.19 -5.6 342,899 + B158DRAFT_2198 0.78 -3.6 342,954 + -1.0 343,225 - B158DRAFT_2199 0.28 +1.2 343,225 - B158DRAFT_2199 0.28 -2.0 343,363 - B158DRAFT_2199 0.41 +0.1
Or see this region's nucleotide sequence