Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2016 and B158DRAFT_2017 are separated by 56 nucleotides B158DRAFT_2017 and B158DRAFT_2018 are separated by 181 nucleotides
B158DRAFT_2016: B158DRAFT_2016 - Zn-dependent protease with chaperone function, at 145,744 to 146,640
_2016
B158DRAFT_2017: B158DRAFT_2017 - Protein of unknown function (DUF2799)., at 146,697 to 147,239
_2017
B158DRAFT_2018: B158DRAFT_2018 - tRNA dihydrouridine synthase A, at 147,421 to 148,380
_2018
Position (kb) 146
147
148 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 145.799 kb on + strand at 145.804 kb on + strand at 145.806 kb on + strand at 145.812 kb on - strand at 145.812 kb on - strand at 145.813 kb on - strand at 145.845 kb on - strand, within B158DRAFT_2016 at 145.847 kb on + strand, within B158DRAFT_2016 at 145.853 kb on + strand, within B158DRAFT_2016 at 145.868 kb on - strand, within B158DRAFT_2016 at 145.915 kb on - strand, within B158DRAFT_2016 at 145.990 kb on + strand, within B158DRAFT_2016 at 146.001 kb on + strand, within B158DRAFT_2016 at 146.001 kb on + strand, within B158DRAFT_2016 at 146.009 kb on - strand, within B158DRAFT_2016 at 146.009 kb on - strand, within B158DRAFT_2016 at 146.038 kb on - strand, within B158DRAFT_2016 at 146.071 kb on + strand, within B158DRAFT_2016 at 146.134 kb on + strand, within B158DRAFT_2016 at 146.135 kb on + strand, within B158DRAFT_2016 at 146.143 kb on - strand, within B158DRAFT_2016 at 146.143 kb on - strand, within B158DRAFT_2016 at 146.143 kb on - strand, within B158DRAFT_2016 at 146.239 kb on + strand, within B158DRAFT_2016 at 146.294 kb on + strand, within B158DRAFT_2016 at 146.294 kb on + strand, within B158DRAFT_2016 at 146.301 kb on + strand, within B158DRAFT_2016 at 146.302 kb on - strand, within B158DRAFT_2016 at 146.389 kb on - strand, within B158DRAFT_2016 at 146.423 kb on - strand, within B158DRAFT_2016 at 146.435 kb on + strand, within B158DRAFT_2016 at 146.435 kb on + strand, within B158DRAFT_2016 at 146.443 kb on - strand, within B158DRAFT_2016 at 146.445 kb on + strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.523 kb on - strand, within B158DRAFT_2016 at 146.582 kb on - strand at 146.692 kb on - strand at 146.777 kb on + strand, within B158DRAFT_2017 at 146.777 kb on + strand, within B158DRAFT_2017 at 146.777 kb on + strand, within B158DRAFT_2017 at 146.777 kb on + strand, within B158DRAFT_2017 at 146.777 kb on + strand, within B158DRAFT_2017 at 146.785 kb on - strand, within B158DRAFT_2017 at 146.785 kb on - strand, within B158DRAFT_2017 at 146.785 kb on - strand, within B158DRAFT_2017 at 146.851 kb on + strand, within B158DRAFT_2017 at 146.874 kb on - strand, within B158DRAFT_2017 at 146.881 kb on + strand, within B158DRAFT_2017 at 146.941 kb on + strand, within B158DRAFT_2017 at 146.946 kb on + strand, within B158DRAFT_2017 at 146.985 kb on + strand, within B158DRAFT_2017 at 146.988 kb on + strand, within B158DRAFT_2017 at 146.988 kb on + strand, within B158DRAFT_2017 at 146.988 kb on + strand, within B158DRAFT_2017 at 146.988 kb on + strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.998 kb on + strand, within B158DRAFT_2017 at 147.006 kb on - strand, within B158DRAFT_2017 at 147.008 kb on - strand, within B158DRAFT_2017 at 147.095 kb on - strand, within B158DRAFT_2017 at 147.224 kb on + strand at 147.232 kb on - strand at 147.233 kb on - strand at 147.248 kb on - strand at 147.285 kb on - strand at 147.340 kb on - strand at 147.340 kb on - strand at 147.391 kb on + strand at 147.391 kb on + strand at 147.392 kb on - strand at 147.399 kb on - strand at 147.399 kb on - strand at 147.399 kb on - strand at 147.424 kb on - strand at 147.424 kb on - strand at 147.426 kb on + strand at 147.426 kb on + strand at 147.431 kb on + strand at 147.434 kb on - strand at 147.434 kb on - strand at 147.434 kb on - strand at 147.434 kb on - strand at 147.434 kb on - strand at 147.434 kb on - strand at 147.440 kb on + strand at 147.475 kb on - strand at 147.475 kb on - strand at 147.482 kb on - strand at 147.483 kb on + strand at 147.483 kb on + strand at 147.483 kb on + strand at 147.483 kb on + strand at 147.483 kb on + strand at 147.483 kb on + strand at 147.491 kb on - strand at 147.491 kb on - strand at 147.491 kb on - strand at 147.491 kb on - strand at 147.491 kb on - strand at 147.522 kb on + strand, within B158DRAFT_2018 at 147.574 kb on + strand, within B158DRAFT_2018 at 147.574 kb on + strand, within B158DRAFT_2018 at 147.624 kb on - strand, within B158DRAFT_2018 at 147.668 kb on + strand, within B158DRAFT_2018 at 147.682 kb on + strand, within B158DRAFT_2018 at 147.738 kb on + strand, within B158DRAFT_2018 at 147.738 kb on + strand, within B158DRAFT_2018 at 147.746 kb on - strand, within B158DRAFT_2018 at 147.815 kb on + strand, within B158DRAFT_2018 at 147.815 kb on + strand, within B158DRAFT_2018 at 147.815 kb on + strand, within B158DRAFT_2018 at 147.870 kb on - strand, within B158DRAFT_2018 at 147.937 kb on - strand, within B158DRAFT_2018 at 148.016 kb on + strand, within B158DRAFT_2018 at 148.019 kb on - strand, within B158DRAFT_2018 at 148.024 kb on - strand, within B158DRAFT_2018 at 148.034 kb on - strand, within B158DRAFT_2018 at 148.080 kb on + strand, within B158DRAFT_2018
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 145,799 + +1.0 145,804 + +0.6 145,806 + -0.4 145,812 - -0.1 145,812 - -4.4 145,813 - -2.1 145,845 - B158DRAFT_2016 0.11 -0.9 145,847 + B158DRAFT_2016 0.11 -0.1 145,853 + B158DRAFT_2016 0.12 -5.2 145,868 - B158DRAFT_2016 0.14 -1.3 145,915 - B158DRAFT_2016 0.19 +0.1 145,990 + B158DRAFT_2016 0.27 +0.9 146,001 + B158DRAFT_2016 0.29 -1.3 146,001 + B158DRAFT_2016 0.29 -1.1 146,009 - B158DRAFT_2016 0.30 +0.2 146,009 - B158DRAFT_2016 0.30 -0.5 146,038 - B158DRAFT_2016 0.33 +0.6 146,071 + B158DRAFT_2016 0.36 -0.0 146,134 + B158DRAFT_2016 0.43 -0.2 146,135 + B158DRAFT_2016 0.44 -2.8 146,143 - B158DRAFT_2016 0.44 +0.5 146,143 - B158DRAFT_2016 0.44 +0.2 146,143 - B158DRAFT_2016 0.44 -2.4 146,239 + B158DRAFT_2016 0.55 -0.4 146,294 + B158DRAFT_2016 0.61 -4.6 146,294 + B158DRAFT_2016 0.61 -1.3 146,301 + B158DRAFT_2016 0.62 -1.0 146,302 - B158DRAFT_2016 0.62 -3.6 146,389 - B158DRAFT_2016 0.72 -1.8 146,423 - B158DRAFT_2016 0.76 -1.3 146,435 + B158DRAFT_2016 0.77 +0.1 146,435 + B158DRAFT_2016 0.77 -1.1 146,443 - B158DRAFT_2016 0.78 -0.4 146,445 + B158DRAFT_2016 0.78 +0.8 146,453 - B158DRAFT_2016 0.79 -0.2 146,453 - B158DRAFT_2016 0.79 -0.3 146,453 - B158DRAFT_2016 0.79 +0.3 146,453 - B158DRAFT_2016 0.79 -1.2 146,453 - B158DRAFT_2016 0.79 -4.0 146,453 - B158DRAFT_2016 0.79 +0.5 146,453 - B158DRAFT_2016 0.79 -4.1 146,453 - B158DRAFT_2016 0.79 -5.2 146,453 - B158DRAFT_2016 0.79 -1.3 146,523 - B158DRAFT_2016 0.87 -0.1 146,582 - +0.0 146,692 - +0.5 146,777 + B158DRAFT_2017 0.15 -0.7 146,777 + B158DRAFT_2017 0.15 +1.0 146,777 + B158DRAFT_2017 0.15 +0.5 146,777 + B158DRAFT_2017 0.15 +0.0 146,777 + B158DRAFT_2017 0.15 +0.5 146,785 - B158DRAFT_2017 0.16 -4.4 146,785 - B158DRAFT_2017 0.16 -0.8 146,785 - B158DRAFT_2017 0.16 -0.0 146,851 + B158DRAFT_2017 0.28 -0.8 146,874 - B158DRAFT_2017 0.33 +0.7 146,881 + B158DRAFT_2017 0.34 -0.2 146,941 + B158DRAFT_2017 0.45 -1.4 146,946 + B158DRAFT_2017 0.46 +1.3 146,985 + B158DRAFT_2017 0.53 +0.0 146,988 + B158DRAFT_2017 0.54 -0.5 146,988 + B158DRAFT_2017 0.54 -4.8 146,988 + B158DRAFT_2017 0.54 +0.3 146,988 + B158DRAFT_2017 0.54 +0.8 146,996 - B158DRAFT_2017 0.55 -0.5 146,996 - B158DRAFT_2017 0.55 +0.7 146,996 - B158DRAFT_2017 0.55 -0.5 146,996 - B158DRAFT_2017 0.55 +0.3 146,996 - B158DRAFT_2017 0.55 -0.1 146,996 - B158DRAFT_2017 0.55 +0.3 146,996 - B158DRAFT_2017 0.55 -2.9 146,996 - B158DRAFT_2017 0.55 +0.5 146,996 - B158DRAFT_2017 0.55 +0.9 146,996 - B158DRAFT_2017 0.55 -0.2 146,998 + B158DRAFT_2017 0.55 -0.3 147,006 - B158DRAFT_2017 0.57 +0.0 147,008 - B158DRAFT_2017 0.57 +0.2 147,095 - B158DRAFT_2017 0.73 -3.7 147,224 + +0.3 147,232 - +1.5 147,233 - -0.5 147,248 - +1.0 147,285 - +0.3 147,340 - +0.1 147,340 - -3.4 147,391 + +0.8 147,391 + +0.8 147,392 - +1.5 147,399 - +0.3 147,399 - -0.1 147,399 - -0.1 147,424 - +1.0 147,424 - -0.0 147,426 + +1.3 147,426 + +0.3 147,431 + +0.6 147,434 - -0.1 147,434 - -0.7 147,434 - +0.1 147,434 - -0.5 147,434 - -4.7 147,434 - +0.3 147,440 + -3.8 147,475 - +0.3 147,475 - -4.4 147,482 - -0.9 147,483 + -1.1 147,483 + +0.5 147,483 + +0.2 147,483 + +0.6 147,483 + -1.1 147,483 + +0.6 147,491 - -0.9 147,491 - +0.2 147,491 - +0.3 147,491 - +0.1 147,491 - -1.3 147,522 + B158DRAFT_2018 0.11 +0.1 147,574 + B158DRAFT_2018 0.16 -0.9 147,574 + B158DRAFT_2018 0.16 -0.0 147,624 - B158DRAFT_2018 0.21 +0.7 147,668 + B158DRAFT_2018 0.26 +0.2 147,682 + B158DRAFT_2018 0.27 -0.1 147,738 + B158DRAFT_2018 0.33 -0.8 147,738 + B158DRAFT_2018 0.33 +0.4 147,746 - B158DRAFT_2018 0.34 +1.1 147,815 + B158DRAFT_2018 0.41 -0.2 147,815 + B158DRAFT_2018 0.41 -2.0 147,815 + B158DRAFT_2018 0.41 -0.1 147,870 - B158DRAFT_2018 0.47 +0.8 147,937 - B158DRAFT_2018 0.54 +0.0 148,016 + B158DRAFT_2018 0.62 -0.5 148,019 - B158DRAFT_2018 0.62 +0.6 148,024 - B158DRAFT_2018 0.63 +0.1 148,034 - B158DRAFT_2018 0.64 -0.2 148,080 + B158DRAFT_2018 0.69 +0.0
Or see this region's nucleotide sequence