Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1987 and B158DRAFT_1988 are separated by 105 nucleotides B158DRAFT_1988 and B158DRAFT_1989 are separated by 145 nucleotides
B158DRAFT_1987: B158DRAFT_1987 - D-alpha,beta-D-heptose 7-phosphate 1-kinase (EC 2.7.1.167)/D-beta-D-heptose 1-phosphate adenylyltransferase (EC 2.7.7.70), at 122,390 to 123,853
_1987
B158DRAFT_1988: B158DRAFT_1988 - hypothetical protein, at 123,959 to 124,249
_1988
B158DRAFT_1989: B158DRAFT_1989 - ribonuclease R, at 124,395 to 126,809
_1989
Position (kb) 123
124
125 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 122.967 kb on - strand, within B158DRAFT_1987 at 122.974 kb on + strand, within B158DRAFT_1987 at 122.974 kb on + strand, within B158DRAFT_1987 at 122.999 kb on + strand, within B158DRAFT_1987 at 122.999 kb on + strand, within B158DRAFT_1987 at 122.999 kb on + strand, within B158DRAFT_1987 at 123.007 kb on - strand, within B158DRAFT_1987 at 123.007 kb on - strand, within B158DRAFT_1987 at 123.030 kb on - strand, within B158DRAFT_1987 at 123.044 kb on + strand, within B158DRAFT_1987 at 123.052 kb on - strand, within B158DRAFT_1987 at 123.098 kb on + strand, within B158DRAFT_1987 at 123.155 kb on - strand, within B158DRAFT_1987 at 123.234 kb on - strand, within B158DRAFT_1987 at 123.264 kb on - strand, within B158DRAFT_1987 at 123.265 kb on + strand, within B158DRAFT_1987 at 123.273 kb on - strand, within B158DRAFT_1987 at 123.366 kb on - strand, within B158DRAFT_1987 at 123.394 kb on + strand, within B158DRAFT_1987 at 123.402 kb on - strand, within B158DRAFT_1987 at 123.404 kb on - strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.413 kb on + strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.418 kb on + strand, within B158DRAFT_1987 at 123.461 kb on - strand, within B158DRAFT_1987 at 123.503 kb on + strand, within B158DRAFT_1987 at 123.503 kb on + strand, within B158DRAFT_1987 at 123.503 kb on + strand, within B158DRAFT_1987 at 123.503 kb on + strand, within B158DRAFT_1987 at 123.503 kb on + strand, within B158DRAFT_1987 at 123.511 kb on - strand, within B158DRAFT_1987 at 123.511 kb on - strand, within B158DRAFT_1987 at 123.511 kb on - strand, within B158DRAFT_1987 at 123.547 kb on - strand, within B158DRAFT_1987 at 123.581 kb on + strand, within B158DRAFT_1987 at 123.581 kb on + strand, within B158DRAFT_1987 at 123.581 kb on + strand, within B158DRAFT_1987 at 123.606 kb on - strand, within B158DRAFT_1987 at 123.637 kb on + strand, within B158DRAFT_1987 at 123.727 kb on + strand at 123.796 kb on + strand at 123.909 kb on + strand at 123.909 kb on + strand at 123.909 kb on + strand at 123.909 kb on + strand at 123.909 kb on + strand at 123.909 kb on + strand at 123.917 kb on - strand at 123.917 kb on - strand at 123.917 kb on - strand at 123.917 kb on - strand at 123.917 kb on - strand at 123.933 kb on - strand at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.061 kb on + strand, within B158DRAFT_1988 at 124.069 kb on - strand, within B158DRAFT_1988 at 124.074 kb on + strand, within B158DRAFT_1988 at 124.082 kb on - strand, within B158DRAFT_1988 at 124.089 kb on + strand, within B158DRAFT_1988 at 124.092 kb on - strand, within B158DRAFT_1988 at 124.119 kb on + strand, within B158DRAFT_1988 at 124.128 kb on + strand, within B158DRAFT_1988 at 124.132 kb on - strand, within B158DRAFT_1988 at 124.137 kb on - strand, within B158DRAFT_1988 at 124.173 kb on + strand, within B158DRAFT_1988 at 124.173 kb on + strand, within B158DRAFT_1988 at 124.173 kb on + strand, within B158DRAFT_1988 at 124.173 kb on + strand, within B158DRAFT_1988 at 124.173 kb on + strand, within B158DRAFT_1988 at 124.181 kb on - strand, within B158DRAFT_1988 at 124.181 kb on - strand, within B158DRAFT_1988 at 124.181 kb on - strand, within B158DRAFT_1988 at 124.181 kb on - strand, within B158DRAFT_1988 at 124.181 kb on - strand, within B158DRAFT_1988 at 124.219 kb on + strand, within B158DRAFT_1988 at 124.251 kb on - strand at 124.297 kb on + strand at 124.349 kb on - strand at 124.359 kb on + strand at 124.418 kb on + strand at 124.426 kb on - strand at 124.426 kb on - strand at 124.454 kb on + strand at 124.494 kb on - strand at 124.494 kb on - strand at 124.513 kb on + strand at 124.521 kb on - strand at 124.521 kb on - strand at 124.542 kb on - strand at 124.549 kb on + strand at 124.549 kb on + strand at 124.549 kb on + strand at 124.549 kb on + strand at 124.549 kb on + strand at 124.554 kb on + strand at 124.557 kb on - strand at 124.557 kb on - strand at 124.559 kb on + strand at 124.559 kb on + strand at 124.559 kb on + strand at 124.562 kb on - strand at 124.567 kb on - strand at 124.586 kb on - strand at 124.626 kb on + strand at 124.636 kb on - strand at 124.768 kb on + strand, within B158DRAFT_1989 at 124.860 kb on + strand, within B158DRAFT_1989 at 125.097 kb on + strand, within B158DRAFT_1989 at 125.213 kb on - strand, within B158DRAFT_1989 at 125.213 kb on - strand, within B158DRAFT_1989 at 125.239 kb on + strand, within B158DRAFT_1989 at 125.247 kb on - strand, within B158DRAFT_1989
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 122,967 - B158DRAFT_1987 0.39 -0.7 122,974 + B158DRAFT_1987 0.40 -3.9 122,974 + B158DRAFT_1987 0.40 -1.2 122,999 + B158DRAFT_1987 0.42 -2.2 122,999 + B158DRAFT_1987 0.42 +0.5 122,999 + B158DRAFT_1987 0.42 +0.6 123,007 - B158DRAFT_1987 0.42 -0.5 123,007 - B158DRAFT_1987 0.42 -1.2 123,030 - B158DRAFT_1987 0.44 +0.2 123,044 + B158DRAFT_1987 0.45 +0.4 123,052 - B158DRAFT_1987 0.45 -3.3 123,098 + B158DRAFT_1987 0.48 -1.0 123,155 - B158DRAFT_1987 0.52 -3.6 123,234 - B158DRAFT_1987 0.58 -0.3 123,264 - B158DRAFT_1987 0.60 -1.4 123,265 + B158DRAFT_1987 0.60 -0.2 123,273 - B158DRAFT_1987 0.60 +0.8 123,366 - B158DRAFT_1987 0.67 -0.7 123,394 + B158DRAFT_1987 0.69 -2.9 123,402 - B158DRAFT_1987 0.69 -0.8 123,404 - B158DRAFT_1987 0.69 +0.4 123,406 + B158DRAFT_1987 0.69 +0.7 123,406 + B158DRAFT_1987 0.69 -1.8 123,406 + B158DRAFT_1987 0.69 +1.8 123,406 + B158DRAFT_1987 0.69 -0.2 123,406 + B158DRAFT_1987 0.69 -1.1 123,406 + B158DRAFT_1987 0.69 +0.1 123,406 + B158DRAFT_1987 0.69 +0.8 123,406 + B158DRAFT_1987 0.69 +2.5 123,406 + B158DRAFT_1987 0.69 +1.0 123,406 + B158DRAFT_1987 0.69 +1.6 123,406 + B158DRAFT_1987 0.69 -2.3 123,413 + B158DRAFT_1987 0.70 +0.5 123,414 - B158DRAFT_1987 0.70 -2.2 123,414 - B158DRAFT_1987 0.70 -3.5 123,414 - B158DRAFT_1987 0.70 +1.9 123,414 - B158DRAFT_1987 0.70 +1.0 123,414 - B158DRAFT_1987 0.70 +1.2 123,414 - B158DRAFT_1987 0.70 -4.5 123,414 - B158DRAFT_1987 0.70 +0.9 123,414 - B158DRAFT_1987 0.70 -3.2 123,418 + B158DRAFT_1987 0.70 +0.7 123,461 - B158DRAFT_1987 0.73 -3.0 123,503 + B158DRAFT_1987 0.76 -0.5 123,503 + B158DRAFT_1987 0.76 +0.3 123,503 + B158DRAFT_1987 0.76 +2.2 123,503 + B158DRAFT_1987 0.76 +1.4 123,503 + B158DRAFT_1987 0.76 -0.8 123,511 - B158DRAFT_1987 0.77 +3.3 123,511 - B158DRAFT_1987 0.77 -1.4 123,511 - B158DRAFT_1987 0.77 -2.4 123,547 - B158DRAFT_1987 0.79 +1.3 123,581 + B158DRAFT_1987 0.81 -1.1 123,581 + B158DRAFT_1987 0.81 -5.2 123,581 + B158DRAFT_1987 0.81 -0.4 123,606 - B158DRAFT_1987 0.83 -3.4 123,637 + B158DRAFT_1987 0.85 -3.2 123,727 + +2.3 123,796 + -1.2 123,909 + -0.5 123,909 + -0.3 123,909 + -1.8 123,909 + -1.2 123,909 + -0.0 123,909 + +0.0 123,917 - +0.3 123,917 - -0.4 123,917 - -0.5 123,917 - -0.7 123,917 - -4.6 123,933 - +0.8 124,007 + B158DRAFT_1988 0.16 -0.0 124,007 + B158DRAFT_1988 0.16 +0.1 124,007 + B158DRAFT_1988 0.16 -0.1 124,007 + B158DRAFT_1988 0.16 -0.2 124,007 + B158DRAFT_1988 0.16 -4.9 124,007 + B158DRAFT_1988 0.16 -3.5 124,007 + B158DRAFT_1988 0.16 -0.8 124,015 - B158DRAFT_1988 0.19 +0.6 124,015 - B158DRAFT_1988 0.19 -0.5 124,015 - B158DRAFT_1988 0.19 -1.0 124,015 - B158DRAFT_1988 0.19 -0.1 124,015 - B158DRAFT_1988 0.19 -0.2 124,015 - B158DRAFT_1988 0.19 +0.4 124,015 - B158DRAFT_1988 0.19 +0.2 124,015 - B158DRAFT_1988 0.19 +0.7 124,015 - B158DRAFT_1988 0.19 -2.0 124,015 - B158DRAFT_1988 0.19 -0.4 124,015 - B158DRAFT_1988 0.19 +0.7 124,015 - B158DRAFT_1988 0.19 -0.3 124,061 + B158DRAFT_1988 0.35 +1.7 124,069 - B158DRAFT_1988 0.38 -2.0 124,074 + B158DRAFT_1988 0.40 +0.8 124,082 - B158DRAFT_1988 0.42 -0.8 124,089 + B158DRAFT_1988 0.45 +0.5 124,092 - B158DRAFT_1988 0.46 -0.7 124,119 + B158DRAFT_1988 0.55 +2.3 124,128 + B158DRAFT_1988 0.58 -1.0 124,132 - B158DRAFT_1988 0.59 +0.6 124,137 - B158DRAFT_1988 0.61 +0.3 124,173 + B158DRAFT_1988 0.74 -2.2 124,173 + B158DRAFT_1988 0.74 +0.3 124,173 + B158DRAFT_1988 0.74 +0.3 124,173 + B158DRAFT_1988 0.74 +0.2 124,173 + B158DRAFT_1988 0.74 -0.3 124,181 - B158DRAFT_1988 0.76 -2.6 124,181 - B158DRAFT_1988 0.76 +0.2 124,181 - B158DRAFT_1988 0.76 -1.4 124,181 - B158DRAFT_1988 0.76 +0.1 124,181 - B158DRAFT_1988 0.76 -2.0 124,219 + B158DRAFT_1988 0.89 +0.3 124,251 - -0.1 124,297 + -3.5 124,349 - +1.4 124,359 + -0.3 124,418 + -1.7 124,426 - -1.1 124,426 - -1.6 124,454 + -0.8 124,494 - -3.4 124,494 - +0.6 124,513 + -1.5 124,521 - +0.7 124,521 - +1.8 124,542 - +0.4 124,549 + +0.8 124,549 + +0.8 124,549 + -4.6 124,549 + -1.8 124,549 + +0.5 124,554 + +0.9 124,557 - -0.5 124,557 - +0.1 124,559 + +0.7 124,559 + -0.3 124,559 + -0.5 124,562 - +0.4 124,567 - +1.1 124,586 - -3.4 124,626 + -3.9 124,636 - -0.0 124,768 + B158DRAFT_1989 0.15 -3.9 124,860 + B158DRAFT_1989 0.19 +0.2 125,097 + B158DRAFT_1989 0.29 -3.4 125,213 - B158DRAFT_1989 0.34 -3.7 125,213 - B158DRAFT_1989 0.34 -2.9 125,239 + B158DRAFT_1989 0.35 +0.7 125,247 - B158DRAFT_1989 0.35 +2.2
Or see this region's nucleotide sequence