Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1817 and B158DRAFT_1818 are separated by 37 nucleotides B158DRAFT_1818 and B158DRAFT_1819 are separated by 2 nucleotides B158DRAFT_1819 and B158DRAFT_1820 are separated by 6 nucleotides
B158DRAFT_1817: B158DRAFT_1817 - seryl-tRNA synthetase (EC 6.1.1.11), at 1,915,438 to 1,916,706
_1817
B158DRAFT_1818: B158DRAFT_1818 - protein CrcB, at 1,916,744 to 1,917,127
_1818
B158DRAFT_1819: B158DRAFT_1819 - ATPase related to the helicase subunit of the Holliday junction resolvase, at 1,917,130 to 1,918,467
_1819
B158DRAFT_1820: B158DRAFT_1820 - periplasmic chaperone LolA, at 1,918,474 to 1,919,157
_1820
Position (kb)
1917
1918
1919 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 1916.829 kb on + strand, within B158DRAFT_1818 at 1916.829 kb on + strand, within B158DRAFT_1818 at 1916.837 kb on - strand, within B158DRAFT_1818 at 1916.837 kb on - strand, within B158DRAFT_1818 at 1916.837 kb on - strand, within B158DRAFT_1818 at 1916.837 kb on - strand, within B158DRAFT_1818 at 1916.864 kb on + strand, within B158DRAFT_1818 at 1917.015 kb on - strand, within B158DRAFT_1818 at 1917.093 kb on - strand at 1917.128 kb on + strand at 1917.152 kb on + strand at 1917.160 kb on - strand at 1917.160 kb on - strand at 1917.166 kb on - strand at 1917.166 kb on - strand at 1917.205 kb on + strand at 1917.205 kb on + strand at 1917.220 kb on + strand at 1917.220 kb on - strand at 1917.220 kb on - strand at 1917.220 kb on - strand at 1917.220 kb on - strand at 1917.261 kb on - strand at 1917.303 kb on - strand, within B158DRAFT_1819 at 1917.355 kb on + strand, within B158DRAFT_1819 at 1917.418 kb on - strand, within B158DRAFT_1819 at 1917.430 kb on - strand, within B158DRAFT_1819 at 1917.488 kb on - strand, within B158DRAFT_1819 at 1917.528 kb on + strand, within B158DRAFT_1819 at 1917.528 kb on + strand, within B158DRAFT_1819 at 1917.529 kb on + strand, within B158DRAFT_1819 at 1917.537 kb on - strand, within B158DRAFT_1819 at 1917.691 kb on - strand, within B158DRAFT_1819 at 1917.738 kb on + strand, within B158DRAFT_1819 at 1917.902 kb on + strand, within B158DRAFT_1819 at 1918.028 kb on - strand, within B158DRAFT_1819 at 1918.033 kb on + strand, within B158DRAFT_1819 at 1918.071 kb on + strand, within B158DRAFT_1819 at 1918.071 kb on + strand, within B158DRAFT_1819 at 1918.071 kb on + strand, within B158DRAFT_1819 at 1918.071 kb on + strand, within B158DRAFT_1819 at 1918.079 kb on - strand, within B158DRAFT_1819 at 1918.079 kb on - strand, within B158DRAFT_1819 at 1918.104 kb on - strand, within B158DRAFT_1819 at 1918.151 kb on + strand, within B158DRAFT_1819 at 1918.153 kb on - strand, within B158DRAFT_1819 at 1918.197 kb on + strand, within B158DRAFT_1819 at 1918.197 kb on - strand, within B158DRAFT_1819 at 1918.215 kb on - strand, within B158DRAFT_1819 at 1918.283 kb on + strand, within B158DRAFT_1819 at 1918.369 kb on + strand at 1918.377 kb on - strand at 1918.530 kb on + strand at 1918.530 kb on + strand at 1918.530 kb on + strand at 1918.530 kb on + strand at 1918.530 kb on + strand at 1918.530 kb on + strand at 1918.530 kb on + strand at 1918.530 kb on + strand at 1918.538 kb on - strand at 1918.538 kb on - strand at 1918.538 kb on - strand at 1919.189 kb on + strand at 1919.189 kb on + strand at 1919.189 kb on + strand at 1919.189 kb on + strand at 1919.197 kb on - strand at 1919.197 kb on - strand at 1919.207 kb on - strand at 1919.237 kb on + strand at 1919.263 kb on + strand at 1919.263 kb on + strand at 1919.271 kb on - strand at 1919.271 kb on - strand at 1919.403 kb on + strand at 1919.419 kb on + strand at 1919.440 kb on + strand at 1919.448 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 1,916,829 + B158DRAFT_1818 0.22 -0.0 1,916,829 + B158DRAFT_1818 0.22 -1.1 1,916,837 - B158DRAFT_1818 0.24 -0.2 1,916,837 - B158DRAFT_1818 0.24 +0.5 1,916,837 - B158DRAFT_1818 0.24 -0.1 1,916,837 - B158DRAFT_1818 0.24 -0.3 1,916,864 + B158DRAFT_1818 0.31 +0.2 1,917,015 - B158DRAFT_1818 0.71 +1.9 1,917,093 - +0.4 1,917,128 + +1.4 1,917,152 + +0.1 1,917,160 - +0.4 1,917,160 - -0.2 1,917,166 - +0.2 1,917,166 - -0.1 1,917,205 + +0.1 1,917,205 + -0.1 1,917,220 + +0.1 1,917,220 - +0.4 1,917,220 - -0.4 1,917,220 - +1.6 1,917,220 - -0.6 1,917,261 - -0.0 1,917,303 - B158DRAFT_1819 0.13 +0.8 1,917,355 + B158DRAFT_1819 0.17 +0.1 1,917,418 - B158DRAFT_1819 0.22 -0.9 1,917,430 - B158DRAFT_1819 0.22 -1.1 1,917,488 - B158DRAFT_1819 0.27 -3.2 1,917,528 + B158DRAFT_1819 0.30 +0.1 1,917,528 + B158DRAFT_1819 0.30 +1.6 1,917,529 + B158DRAFT_1819 0.30 -3.7 1,917,537 - B158DRAFT_1819 0.30 -0.1 1,917,691 - B158DRAFT_1819 0.42 +0.0 1,917,738 + B158DRAFT_1819 0.45 -2.2 1,917,902 + B158DRAFT_1819 0.58 -0.7 1,918,028 - B158DRAFT_1819 0.67 +0.5 1,918,033 + B158DRAFT_1819 0.67 +1.1 1,918,071 + B158DRAFT_1819 0.70 -0.1 1,918,071 + B158DRAFT_1819 0.70 -5.4 1,918,071 + B158DRAFT_1819 0.70 +0.2 1,918,071 + B158DRAFT_1819 0.70 -1.3 1,918,079 - B158DRAFT_1819 0.71 +0.5 1,918,079 - B158DRAFT_1819 0.71 +0.7 1,918,104 - B158DRAFT_1819 0.73 -2.5 1,918,151 + B158DRAFT_1819 0.76 +0.0 1,918,153 - B158DRAFT_1819 0.76 +0.1 1,918,197 + B158DRAFT_1819 0.80 -0.1 1,918,197 - B158DRAFT_1819 0.80 -3.3 1,918,215 - B158DRAFT_1819 0.81 -0.4 1,918,283 + B158DRAFT_1819 0.86 +1.1 1,918,369 + +0.6 1,918,377 - -0.2 1,918,530 + -0.3 1,918,530 + +0.9 1,918,530 + -0.9 1,918,530 + -1.4 1,918,530 + +1.0 1,918,530 + +0.2 1,918,530 + -1.9 1,918,530 + -0.7 1,918,538 - +0.7 1,918,538 - -0.4 1,918,538 - -0.3 1,919,189 + +0.7 1,919,189 + +0.0 1,919,189 + -1.0 1,919,189 + -0.0 1,919,197 - +1.0 1,919,197 - +0.0 1,919,207 - +0.5 1,919,237 + -1.8 1,919,263 + +0.4 1,919,263 + +0.6 1,919,271 - -0.8 1,919,271 - +0.7 1,919,403 + -5.5 1,919,419 + -0.2 1,919,440 + +1.8 1,919,448 - +0.8
Or see this region's nucleotide sequence