Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1616 and B158DRAFT_1617 are separated by 16 nucleotides B158DRAFT_1617 and B158DRAFT_1618 are separated by 256 nucleotides
B158DRAFT_1616: B158DRAFT_1616 - copper-(or silver)-translocating P-type ATPase, at 1,675,449 to 1,677,701
_1616
B158DRAFT_1617: B158DRAFT_1617 - hypothetical protein, at 1,677,718 to 1,678,080
_1617
B158DRAFT_1618: B158DRAFT_1618 - sodium/proton antiporter, NhaD family (TC 2.A.62), at 1,678,337 to 1,679,740
_1618
Position (kb)
1677
1678
1679 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 1676.880 kb on + strand, within B158DRAFT_1616 at 1677.085 kb on - strand, within B158DRAFT_1616 at 1677.248 kb on - strand, within B158DRAFT_1616 at 1677.279 kb on - strand, within B158DRAFT_1616 at 1677.339 kb on + strand, within B158DRAFT_1616 at 1677.340 kb on - strand, within B158DRAFT_1616 at 1677.383 kb on + strand, within B158DRAFT_1616 at 1677.446 kb on - strand, within B158DRAFT_1616 at 1677.446 kb on - strand, within B158DRAFT_1616 at 1677.457 kb on + strand, within B158DRAFT_1616 at 1677.457 kb on + strand, within B158DRAFT_1616 at 1677.465 kb on - strand, within B158DRAFT_1616 at 1677.470 kb on - strand, within B158DRAFT_1616 at 1677.477 kb on - strand at 1677.490 kb on + strand at 1677.517 kb on + strand at 1677.519 kb on - strand at 1677.573 kb on + strand at 1677.581 kb on - strand at 1677.581 kb on - strand at 1677.581 kb on - strand at 1677.581 kb on - strand at 1677.602 kb on + strand at 1677.605 kb on - strand at 1677.648 kb on - strand at 1677.651 kb on + strand at 1677.651 kb on + strand at 1677.651 kb on + strand at 1677.656 kb on + strand at 1677.659 kb on - strand at 1677.695 kb on + strand at 1677.703 kb on - strand at 1677.746 kb on + strand at 1677.746 kb on + strand at 1677.754 kb on - strand at 1677.754 kb on - strand at 1677.754 kb on - strand at 1677.754 kb on - strand at 1677.802 kb on - strand, within B158DRAFT_1617 at 1677.814 kb on + strand, within B158DRAFT_1617 at 1677.814 kb on + strand, within B158DRAFT_1617 at 1677.856 kb on - strand, within B158DRAFT_1617 at 1677.870 kb on - strand, within B158DRAFT_1617 at 1677.870 kb on - strand, within B158DRAFT_1617 at 1678.053 kb on + strand at 1678.053 kb on + strand at 1678.114 kb on + strand at 1678.120 kb on + strand at 1678.127 kb on + strand at 1678.128 kb on - strand at 1678.128 kb on - strand at 1678.154 kb on + strand at 1678.201 kb on + strand at 1678.209 kb on - strand at 1678.221 kb on - strand at 1678.277 kb on + strand at 1678.285 kb on - strand at 1678.293 kb on + strand at 1678.322 kb on + strand at 1678.480 kb on - strand, within B158DRAFT_1618 at 1678.516 kb on + strand, within B158DRAFT_1618 at 1678.547 kb on + strand, within B158DRAFT_1618 at 1678.547 kb on + strand, within B158DRAFT_1618 at 1678.555 kb on - strand, within B158DRAFT_1618 at 1678.555 kb on - strand, within B158DRAFT_1618 at 1678.555 kb on - strand, within B158DRAFT_1618 at 1678.674 kb on + strand, within B158DRAFT_1618 at 1678.713 kb on - strand, within B158DRAFT_1618 at 1678.739 kb on + strand, within B158DRAFT_1618 at 1678.754 kb on + strand, within B158DRAFT_1618 at 1678.767 kb on - strand, within B158DRAFT_1618 at 1678.767 kb on - strand, within B158DRAFT_1618 at 1678.770 kb on + strand, within B158DRAFT_1618 at 1678.808 kb on + strand, within B158DRAFT_1618 at 1678.808 kb on + strand, within B158DRAFT_1618 at 1678.808 kb on + strand, within B158DRAFT_1618 at 1678.816 kb on - strand, within B158DRAFT_1618 at 1678.816 kb on - strand, within B158DRAFT_1618 at 1678.816 kb on - strand, within B158DRAFT_1618 at 1678.816 kb on - strand, within B158DRAFT_1618 at 1678.818 kb on - strand, within B158DRAFT_1618 at 1678.818 kb on - strand, within B158DRAFT_1618 at 1678.820 kb on + strand, within B158DRAFT_1618 at 1678.877 kb on + strand, within B158DRAFT_1618 at 1678.885 kb on - strand, within B158DRAFT_1618 at 1678.885 kb on - strand, within B158DRAFT_1618 at 1678.895 kb on - strand, within B158DRAFT_1618 at 1679.002 kb on + strand, within B158DRAFT_1618 at 1679.071 kb on + strand, within B158DRAFT_1618 at 1679.079 kb on + strand, within B158DRAFT_1618
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 1,676,880 + B158DRAFT_1616 0.64 +0.0 1,677,085 - B158DRAFT_1616 0.73 -4.3 1,677,248 - B158DRAFT_1616 0.80 -3.2 1,677,279 - B158DRAFT_1616 0.81 -0.1 1,677,339 + B158DRAFT_1616 0.84 +0.2 1,677,340 - B158DRAFT_1616 0.84 -0.9 1,677,383 + B158DRAFT_1616 0.86 -0.0 1,677,446 - B158DRAFT_1616 0.89 -0.8 1,677,446 - B158DRAFT_1616 0.89 -2.3 1,677,457 + B158DRAFT_1616 0.89 -2.1 1,677,457 + B158DRAFT_1616 0.89 +0.3 1,677,465 - B158DRAFT_1616 0.89 -0.0 1,677,470 - B158DRAFT_1616 0.90 -1.7 1,677,477 - +0.2 1,677,490 + -0.0 1,677,517 + -0.3 1,677,519 - -0.0 1,677,573 + -3.8 1,677,581 - +0.8 1,677,581 - +1.7 1,677,581 - -0.6 1,677,581 - +0.6 1,677,602 + -0.5 1,677,605 - -5.0 1,677,648 - -1.3 1,677,651 + +1.3 1,677,651 + +0.3 1,677,651 + -2.2 1,677,656 + -1.3 1,677,659 - -0.9 1,677,695 + -1.6 1,677,703 - +0.6 1,677,746 + +0.6 1,677,746 + -4.8 1,677,754 - +1.9 1,677,754 - +0.5 1,677,754 - -3.4 1,677,754 - -0.1 1,677,802 - B158DRAFT_1617 0.23 -0.1 1,677,814 + B158DRAFT_1617 0.26 -2.8 1,677,814 + B158DRAFT_1617 0.26 -1.3 1,677,856 - B158DRAFT_1617 0.38 -3.8 1,677,870 - B158DRAFT_1617 0.42 -0.0 1,677,870 - B158DRAFT_1617 0.42 -0.4 1,678,053 + +0.1 1,678,053 + -4.0 1,678,114 + +0.6 1,678,120 + -1.4 1,678,127 + -2.3 1,678,128 - -1.0 1,678,128 - -1.4 1,678,154 + -2.3 1,678,201 + -0.5 1,678,209 - -0.8 1,678,221 - +0.3 1,678,277 + -2.2 1,678,285 - -1.0 1,678,293 + -0.3 1,678,322 + +0.6 1,678,480 - B158DRAFT_1618 0.10 -0.8 1,678,516 + B158DRAFT_1618 0.13 +1.2 1,678,547 + B158DRAFT_1618 0.15 +0.7 1,678,547 + B158DRAFT_1618 0.15 -0.4 1,678,555 - B158DRAFT_1618 0.16 -0.3 1,678,555 - B158DRAFT_1618 0.16 +0.5 1,678,555 - B158DRAFT_1618 0.16 -1.1 1,678,674 + B158DRAFT_1618 0.24 -1.7 1,678,713 - B158DRAFT_1618 0.27 -0.9 1,678,739 + B158DRAFT_1618 0.29 -0.9 1,678,754 + B158DRAFT_1618 0.30 +0.6 1,678,767 - B158DRAFT_1618 0.31 -1.6 1,678,767 - B158DRAFT_1618 0.31 +0.5 1,678,770 + B158DRAFT_1618 0.31 -0.4 1,678,808 + B158DRAFT_1618 0.34 +1.7 1,678,808 + B158DRAFT_1618 0.34 -3.1 1,678,808 + B158DRAFT_1618 0.34 -0.2 1,678,816 - B158DRAFT_1618 0.34 -4.5 1,678,816 - B158DRAFT_1618 0.34 +1.1 1,678,816 - B158DRAFT_1618 0.34 -0.8 1,678,816 - B158DRAFT_1618 0.34 -1.9 1,678,818 - B158DRAFT_1618 0.34 -0.4 1,678,818 - B158DRAFT_1618 0.34 +1.1 1,678,820 + B158DRAFT_1618 0.34 -1.9 1,678,877 + B158DRAFT_1618 0.38 -0.5 1,678,885 - B158DRAFT_1618 0.39 -0.2 1,678,885 - B158DRAFT_1618 0.39 -1.5 1,678,895 - B158DRAFT_1618 0.40 -1.0 1,679,002 + B158DRAFT_1618 0.47 +1.4 1,679,071 + B158DRAFT_1618 0.52 +0.3 1,679,079 + B158DRAFT_1618 0.53 -0.9
Or see this region's nucleotide sequence