Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1511

Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1510 and B158DRAFT_1511 are separated by 12 nucleotidesB158DRAFT_1511 and B158DRAFT_1512 are separated by 6 nucleotidesB158DRAFT_1512 and B158DRAFT_1513 are separated by 7 nucleotidesB158DRAFT_1513 and B158DRAFT_1514 are separated by 165 nucleotides B158DRAFT_1510: B158DRAFT_1510 - Predicted transcriptional regulator, at 1,565,089 to 1,566,108 _1510 B158DRAFT_1511: B158DRAFT_1511 - Predicted esterase, at 1,566,121 to 1,566,690 _1511 B158DRAFT_1512: B158DRAFT_1512 - Protein of unknown function (DUF2489)., at 1,566,697 to 1,567,170 _1512 B158DRAFT_1513: B158DRAFT_1513 - tRNA_Arg_CCG, at 1,567,178 to 1,567,254 _1513 B158DRAFT_1514: B158DRAFT_1514 - Pseudouridylate synthases, 23S RNA-specific, at 1,567,420 to 1,568,088 _1514 Position (kb) 1566 1567Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 1565.139 kb on - strandat 1565.141 kb on - strandat 1565.150 kb on - strandat 1565.178 kb on - strandat 1565.208 kb on - strand, within B158DRAFT_1510at 1565.236 kb on - strand, within B158DRAFT_1510at 1565.255 kb on - strand, within B158DRAFT_1510at 1565.260 kb on - strand, within B158DRAFT_1510at 1565.262 kb on + strand, within B158DRAFT_1510at 1565.262 kb on + strand, within B158DRAFT_1510at 1565.262 kb on + strand, within B158DRAFT_1510at 1565.270 kb on - strand, within B158DRAFT_1510at 1565.270 kb on - strand, within B158DRAFT_1510at 1565.270 kb on - strand, within B158DRAFT_1510at 1565.270 kb on - strandat 1565.343 kb on + strand, within B158DRAFT_1510at 1565.351 kb on - strand, within B158DRAFT_1510at 1565.351 kb on - strand, within B158DRAFT_1510at 1565.359 kb on + strand, within B158DRAFT_1510at 1565.367 kb on - strand, within B158DRAFT_1510at 1565.367 kb on - strand, within B158DRAFT_1510at 1565.367 kb on - strand, within B158DRAFT_1510at 1565.367 kb on - strand, within B158DRAFT_1510at 1565.423 kb on + strand, within B158DRAFT_1510at 1565.453 kb on - strand, within B158DRAFT_1510at 1565.517 kb on + strand, within B158DRAFT_1510at 1565.517 kb on + strand, within B158DRAFT_1510at 1565.517 kb on + strand, within B158DRAFT_1510at 1565.517 kb on + strand, within B158DRAFT_1510at 1565.525 kb on - strand, within B158DRAFT_1510at 1565.525 kb on - strand, within B158DRAFT_1510at 1565.541 kb on + strand, within B158DRAFT_1510at 1565.541 kb on + strand, within B158DRAFT_1510at 1565.549 kb on - strand, within B158DRAFT_1510at 1565.568 kb on + strand, within B158DRAFT_1510at 1565.568 kb on + strand, within B158DRAFT_1510at 1565.568 kb on + strand, within B158DRAFT_1510at 1565.568 kb on + strand, within B158DRAFT_1510at 1565.576 kb on - strand, within B158DRAFT_1510at 1565.603 kb on - strand, within B158DRAFT_1510at 1565.604 kb on + strand, within B158DRAFT_1510at 1565.604 kb on + strand, within B158DRAFT_1510at 1565.657 kb on + strand, within B158DRAFT_1510at 1565.665 kb on - strand, within B158DRAFT_1510at 1565.676 kb on + strand, within B158DRAFT_1510at 1565.684 kb on - strand, within B158DRAFT_1510at 1565.704 kb on + strand, within B158DRAFT_1510at 1565.704 kb on + strand, within B158DRAFT_1510at 1565.820 kb on + strand, within B158DRAFT_1510at 1565.851 kb on - strand, within B158DRAFT_1510at 1565.876 kb on + strand, within B158DRAFT_1510at 1565.884 kb on - strand, within B158DRAFT_1510at 1565.922 kb on + strand, within B158DRAFT_1510at 1565.924 kb on + strand, within B158DRAFT_1510at 1565.942 kb on - strand, within B158DRAFT_1510at 1565.958 kb on - strand, within B158DRAFT_1510at 1565.972 kb on + strand, within B158DRAFT_1510at 1566.075 kb on - strandat 1566.075 kb on - strandat 1566.075 kb on - strandat 1566.084 kb on + strandat 1566.092 kb on - strandat 1566.092 kb on - strandat 1566.101 kb on - strandat 1566.109 kb on + strandat 1566.117 kb on - strandat 1566.155 kb on - strandat 1566.211 kb on + strand, within B158DRAFT_1511at 1566.211 kb on + strand, within B158DRAFT_1511at 1566.219 kb on - strand, within B158DRAFT_1511at 1566.224 kb on + strand, within B158DRAFT_1511at 1566.225 kb on - strand, within B158DRAFT_1511at 1566.233 kb on - strand, within B158DRAFT_1511at 1566.239 kb on + strand, within B158DRAFT_1511at 1566.239 kb on + strand, within B158DRAFT_1511at 1566.239 kb on + strand, within B158DRAFT_1511at 1566.247 kb on - strand, within B158DRAFT_1511at 1566.247 kb on - strand, within B158DRAFT_1511at 1566.341 kb on - strand, within B158DRAFT_1511at 1566.353 kb on + strand, within B158DRAFT_1511at 1566.361 kb on - strand, within B158DRAFT_1511at 1566.361 kb on - strand, within B158DRAFT_1511at 1566.361 kb on - strand, within B158DRAFT_1511at 1566.361 kb on - strand, within B158DRAFT_1511at 1566.401 kb on - strand, within B158DRAFT_1511at 1566.463 kb on - strand, within B158DRAFT_1511at 1566.475 kb on + strand, within B158DRAFT_1511at 1566.478 kb on + strand, within B158DRAFT_1511at 1566.478 kb on - strand, within B158DRAFT_1511at 1566.530 kb on + strand, within B158DRAFT_1511at 1566.538 kb on - strand, within B158DRAFT_1511at 1566.543 kb on - strand, within B158DRAFT_1511at 1566.548 kb on + strand, within B158DRAFT_1511at 1566.593 kb on + strand, within B158DRAFT_1511at 1566.594 kb on + strand, within B158DRAFT_1511at 1566.602 kb on - strand, within B158DRAFT_1511at 1566.602 kb on - strand, within B158DRAFT_1511at 1566.622 kb on + strand, within B158DRAFT_1511at 1566.632 kb on + strand, within B158DRAFT_1511at 1566.640 kb on - strandat 1566.640 kb on - strandat 1566.762 kb on - strand, within B158DRAFT_1512at 1566.825 kb on - strand, within B158DRAFT_1512at 1566.884 kb on + strand, within B158DRAFT_1512at 1566.892 kb on - strand, within B158DRAFT_1512at 1566.894 kb on + strand, within B158DRAFT_1512at 1566.902 kb on - strand, within B158DRAFT_1512at 1566.904 kb on + strand, within B158DRAFT_1512at 1566.942 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.981 kb on + strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.989 kb on - strand, within B158DRAFT_1512at 1566.999 kb on - strand, within B158DRAFT_1512at 1567.091 kb on - strand, within B158DRAFT_1512at 1567.114 kb on - strand, within B158DRAFT_1512at 1567.140 kb on + strandat 1567.148 kb on + strandat 1567.293 kb on - strandat 1567.305 kb on + strandat 1567.313 kb on - strandat 1567.358 kb on - strandat 1567.358 kb on - strandat 1567.372 kb on + strandat 1567.452 kb on - strandat 1567.475 kb on - strandat 1567.477 kb on + strandat 1567.482 kb on + strandat 1567.482 kb on + strandat 1567.482 kb on + strandat 1567.482 kb on + strandat 1567.490 kb on + strand, within B158DRAFT_1514at 1567.490 kb on - strand, within B158DRAFT_1514at 1567.490 kb on - strand, within B158DRAFT_1514at 1567.490 kb on - strand, within B158DRAFT_1514at 1567.562 kb on - strand, within B158DRAFT_1514at 1567.562 kb on - strand, within B158DRAFT_1514at 1567.562 kb on - strand, within B158DRAFT_1514at 1567.562 kb on - strand, within B158DRAFT_1514at 1567.562 kb on - strand, within B158DRAFT_1514at 1567.569 kb on + strand, within B158DRAFT_1514at 1567.572 kb on - strand, within B158DRAFT_1514at 1567.572 kb on - strand, within B158DRAFT_1514at 1567.598 kb on - strand, within B158DRAFT_1514at 1567.626 kb on + strand, within B158DRAFT_1514

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml
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1,565,139 - -1.2
1,565,141 - +0.4
1,565,150 - +1.3
1,565,178 - +0.2
1,565,208 - B158DRAFT_1510 0.12 -0.2
1,565,236 - B158DRAFT_1510 0.14 +1.5
1,565,255 - B158DRAFT_1510 0.16 +0.5
1,565,260 - B158DRAFT_1510 0.17 +0.1
1,565,262 + B158DRAFT_1510 0.17 +0.2
1,565,262 + B158DRAFT_1510 0.17 +0.5
1,565,262 + B158DRAFT_1510 0.17 +0.7
1,565,270 - B158DRAFT_1510 0.18 +0.2
1,565,270 - B158DRAFT_1510 0.18 +0.3
1,565,270 - B158DRAFT_1510 0.18 -0.8
1,565,270 - -0.8
1,565,343 + B158DRAFT_1510 0.25 -0.7
1,565,351 - B158DRAFT_1510 0.26 -1.0
1,565,351 - B158DRAFT_1510 0.26 -1.7
1,565,359 + B158DRAFT_1510 0.26 -3.7
1,565,367 - B158DRAFT_1510 0.27 -1.5
1,565,367 - B158DRAFT_1510 0.27 -1.4
1,565,367 - B158DRAFT_1510 0.27 -2.1
1,565,367 - B158DRAFT_1510 0.27 -1.7
1,565,423 + B158DRAFT_1510 0.33 -0.9
1,565,453 - B158DRAFT_1510 0.36 +0.4
1,565,517 + B158DRAFT_1510 0.42 +0.3
1,565,517 + B158DRAFT_1510 0.42 -0.2
1,565,517 + B158DRAFT_1510 0.42 -3.0
1,565,517 + B158DRAFT_1510 0.42 +1.2
1,565,525 - B158DRAFT_1510 0.43 +1.0
1,565,525 - B158DRAFT_1510 0.43 +0.1
1,565,541 + B158DRAFT_1510 0.44 +0.1
1,565,541 + B158DRAFT_1510 0.44 +1.0
1,565,549 - B158DRAFT_1510 0.45 +0.0
1,565,568 + B158DRAFT_1510 0.47 -1.0
1,565,568 + B158DRAFT_1510 0.47 +1.0
1,565,568 + B158DRAFT_1510 0.47 -0.9
1,565,568 + B158DRAFT_1510 0.47 -0.8
1,565,576 - B158DRAFT_1510 0.48 +0.1
1,565,603 - B158DRAFT_1510 0.50 +0.6
1,565,604 + B158DRAFT_1510 0.50 +0.3
1,565,604 + B158DRAFT_1510 0.50 +0.4
1,565,657 + B158DRAFT_1510 0.56 +0.2
1,565,665 - B158DRAFT_1510 0.56 +1.3
1,565,676 + B158DRAFT_1510 0.58 +0.0
1,565,684 - B158DRAFT_1510 0.58 +0.2
1,565,704 + B158DRAFT_1510 0.60 -0.3
1,565,704 + B158DRAFT_1510 0.60 -0.4
1,565,820 + B158DRAFT_1510 0.72 -3.5
1,565,851 - B158DRAFT_1510 0.75 +1.3
1,565,876 + B158DRAFT_1510 0.77 -1.4
1,565,884 - B158DRAFT_1510 0.78 -3.6
1,565,922 + B158DRAFT_1510 0.82 -3.4
1,565,924 + B158DRAFT_1510 0.82 -2.9
1,565,942 - B158DRAFT_1510 0.84 -5.0
1,565,958 - B158DRAFT_1510 0.85 -0.4
1,565,972 + B158DRAFT_1510 0.87 +0.3
1,566,075 - -0.0
1,566,075 - -0.7
1,566,075 - -1.5
1,566,084 + +0.7
1,566,092 - -0.1
1,566,092 - -1.7
1,566,101 - +0.6
1,566,109 + +0.2
1,566,117 - -0.4
1,566,155 - -1.1
1,566,211 + B158DRAFT_1511 0.16 -0.5
1,566,211 + B158DRAFT_1511 0.16 -0.3
1,566,219 - B158DRAFT_1511 0.17 +1.6
1,566,224 + B158DRAFT_1511 0.18 -0.4
1,566,225 - B158DRAFT_1511 0.18 +0.8
1,566,233 - B158DRAFT_1511 0.20 -0.6
1,566,239 + B158DRAFT_1511 0.21 +1.1
1,566,239 + B158DRAFT_1511 0.21 +0.7
1,566,239 + B158DRAFT_1511 0.21 +0.0
1,566,247 - B158DRAFT_1511 0.22 +0.1
1,566,247 - B158DRAFT_1511 0.22 +0.8
1,566,341 - B158DRAFT_1511 0.39 -0.1
1,566,353 + B158DRAFT_1511 0.41 +0.5
1,566,361 - B158DRAFT_1511 0.42 -0.3
1,566,361 - B158DRAFT_1511 0.42 -0.8
1,566,361 - B158DRAFT_1511 0.42 -2.5
1,566,361 - B158DRAFT_1511 0.42 +0.9
1,566,401 - B158DRAFT_1511 0.49 -3.9
1,566,463 - B158DRAFT_1511 0.60 -3.0
1,566,475 + B158DRAFT_1511 0.62 +0.2
1,566,478 + B158DRAFT_1511 0.63 -0.9
1,566,478 - B158DRAFT_1511 0.63 +0.3
1,566,530 + B158DRAFT_1511 0.72 -4.3
1,566,538 - B158DRAFT_1511 0.73 -3.2
1,566,543 - B158DRAFT_1511 0.74 -3.8
1,566,548 + B158DRAFT_1511 0.75 +0.4
1,566,593 + B158DRAFT_1511 0.83 +0.9
1,566,594 + B158DRAFT_1511 0.83 +0.7
1,566,602 - B158DRAFT_1511 0.84 +0.4
1,566,602 - B158DRAFT_1511 0.84 -0.1
1,566,622 + B158DRAFT_1511 0.88 -0.1
1,566,632 + B158DRAFT_1511 0.90 +0.6
1,566,640 - +0.0
1,566,640 - -0.1
1,566,762 - B158DRAFT_1512 0.14 +2.0
1,566,825 - B158DRAFT_1512 0.27 +0.4
1,566,884 + B158DRAFT_1512 0.39 +0.1
1,566,892 - B158DRAFT_1512 0.41 -0.2
1,566,894 + B158DRAFT_1512 0.42 +0.5
1,566,902 - B158DRAFT_1512 0.43 +0.3
1,566,904 + B158DRAFT_1512 0.44 -1.5
1,566,942 + B158DRAFT_1512 0.52 +0.4
1,566,981 + B158DRAFT_1512 0.60 +0.7
1,566,981 + B158DRAFT_1512 0.60 +1.7
1,566,981 + B158DRAFT_1512 0.60 +0.1
1,566,981 + B158DRAFT_1512 0.60 -4.5
1,566,981 + B158DRAFT_1512 0.60 -0.1
1,566,981 + B158DRAFT_1512 0.60 +1.0
1,566,981 + B158DRAFT_1512 0.60 +0.2
1,566,981 + B158DRAFT_1512 0.60 -5.1
1,566,981 + B158DRAFT_1512 0.60 +0.2
1,566,981 + B158DRAFT_1512 0.60 +0.0
1,566,981 + B158DRAFT_1512 0.60 -0.7
1,566,981 + B158DRAFT_1512 0.60 -0.1
1,566,981 + B158DRAFT_1512 0.60 +0.3
1,566,981 + B158DRAFT_1512 0.60 -1.0
1,566,981 + B158DRAFT_1512 0.60 -0.2
1,566,981 + B158DRAFT_1512 0.60 +0.2
1,566,981 + B158DRAFT_1512 0.60 -4.2
1,566,989 - B158DRAFT_1512 0.62 +0.0
1,566,989 - B158DRAFT_1512 0.62 -3.7
1,566,989 - B158DRAFT_1512 0.62 -0.3
1,566,989 - B158DRAFT_1512 0.62 -4.0
1,566,989 - B158DRAFT_1512 0.62 -0.0
1,566,989 - B158DRAFT_1512 0.62 -4.7
1,566,989 - B158DRAFT_1512 0.62 -1.2
1,566,989 - B158DRAFT_1512 0.62 +0.1
1,566,989 - B158DRAFT_1512 0.62 -1.6
1,566,989 - B158DRAFT_1512 0.62 -0.7
1,566,989 - B158DRAFT_1512 0.62 -2.0
1,566,999 - B158DRAFT_1512 0.64 -4.1
1,567,091 - B158DRAFT_1512 0.83 -0.9
1,567,114 - B158DRAFT_1512 0.88 +0.4
1,567,140 + -4.4
1,567,148 + +0.7
1,567,293 - +0.7
1,567,305 + +2.3
1,567,313 - -0.5
1,567,358 - -1.2
1,567,358 - +0.1
1,567,372 + +0.0
1,567,452 - +0.6
1,567,475 - -0.4
1,567,477 + -0.1
1,567,482 + -1.3
1,567,482 + +1.0
1,567,482 + -0.5
1,567,482 + -0.5
1,567,490 + B158DRAFT_1514 0.10 -0.8
1,567,490 - B158DRAFT_1514 0.10 +1.1
1,567,490 - B158DRAFT_1514 0.10 -0.7
1,567,490 - B158DRAFT_1514 0.10 -1.6
1,567,562 - B158DRAFT_1514 0.21 -0.3
1,567,562 - B158DRAFT_1514 0.21 +0.0
1,567,562 - B158DRAFT_1514 0.21 -0.5
1,567,562 - B158DRAFT_1514 0.21 +0.3
1,567,562 - B158DRAFT_1514 0.21 +0.0
1,567,569 + B158DRAFT_1514 0.22 +0.2
1,567,572 - B158DRAFT_1514 0.23 -0.1
1,567,572 - B158DRAFT_1514 0.23 +0.1
1,567,598 - B158DRAFT_1514 0.27 +0.4
1,567,626 + B158DRAFT_1514 0.31 +0.9

Or see this region's nucleotide sequence