Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1231

Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1229 and B158DRAFT_1230 are separated by 1 nucleotidesB158DRAFT_1230 and B158DRAFT_1231 are separated by 56 nucleotidesB158DRAFT_1231 and B158DRAFT_1232 are separated by 250 nucleotidesB158DRAFT_1232 and B158DRAFT_1233 are separated by 325 nucleotides B158DRAFT_1229: B158DRAFT_1229 - Uncharacterized conserved protein, at 1,268,525 to 1,269,235 _1229 B158DRAFT_1230: B158DRAFT_1230 - Glycerophosphoryl diester phosphodiesterase, at 1,269,237 to 1,269,917 _1230 B158DRAFT_1231: B158DRAFT_1231 - bacterioferritin, at 1,269,974 to 1,270,453 _1231 B158DRAFT_1232: B158DRAFT_1232 - Bacterioferritin-associated ferredoxin, at 1,270,704 to 1,270,934 _1232 B158DRAFT_1233: B158DRAFT_1233 - Multimeric flavodoxin WrbA, at 1,271,260 to 1,271,826 _1233 Position (kb) 1269 1270 1271Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1269.053 kb on - strand, within B158DRAFT_1229at 1269.225 kb on + strandat 1269.233 kb on - strandat 1269.243 kb on + strandat 1269.243 kb on - strandat 1269.267 kb on + strandat 1269.269 kb on - strandat 1269.276 kb on + strandat 1269.276 kb on + strandat 1269.284 kb on - strandat 1269.288 kb on + strandat 1269.306 kb on + strand, within B158DRAFT_1230at 1269.306 kb on + strand, within B158DRAFT_1230at 1269.307 kb on + strand, within B158DRAFT_1230at 1269.334 kb on + strand, within B158DRAFT_1230at 1269.419 kb on - strand, within B158DRAFT_1230at 1269.432 kb on + strand, within B158DRAFT_1230at 1269.448 kb on - strand, within B158DRAFT_1230at 1269.468 kb on + strand, within B158DRAFT_1230at 1269.473 kb on + strand, within B158DRAFT_1230at 1269.476 kb on - strand, within B158DRAFT_1230at 1269.533 kb on + strand, within B158DRAFT_1230at 1269.542 kb on + strand, within B158DRAFT_1230at 1269.701 kb on + strand, within B158DRAFT_1230at 1269.701 kb on + strand, within B158DRAFT_1230at 1269.719 kb on - strand, within B158DRAFT_1230at 1269.719 kb on - strand, within B158DRAFT_1230at 1269.736 kb on - strand, within B158DRAFT_1230at 1269.757 kb on + strand, within B158DRAFT_1230at 1269.762 kb on + strand, within B158DRAFT_1230at 1269.762 kb on + strand, within B158DRAFT_1230at 1269.765 kb on - strand, within B158DRAFT_1230at 1269.770 kb on - strand, within B158DRAFT_1230at 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.854 kb on + strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.862 kb on - strandat 1269.901 kb on + strandat 1269.909 kb on - strandat 1269.909 kb on - strandat 1269.910 kb on - strandat 1269.910 kb on - strandat 1269.939 kb on + strandat 1269.939 kb on + strandat 1269.939 kb on + strandat 1269.939 kb on + strandat 1269.939 kb on + strandat 1269.939 kb on + strandat 1269.947 kb on - strandat 1269.947 kb on - strandat 1269.952 kb on - strandat 1269.952 kb on - strandat 1270.099 kb on + strand, within B158DRAFT_1231at 1270.099 kb on + strand, within B158DRAFT_1231at 1270.107 kb on - strand, within B158DRAFT_1231at 1270.107 kb on - strand, within B158DRAFT_1231at 1270.135 kb on + strand, within B158DRAFT_1231at 1270.135 kb on + strand, within B158DRAFT_1231at 1270.135 kb on + strand, within B158DRAFT_1231at 1270.135 kb on + strand, within B158DRAFT_1231at 1270.141 kb on - strand, within B158DRAFT_1231at 1270.143 kb on - strand, within B158DRAFT_1231at 1270.215 kb on + strand, within B158DRAFT_1231at 1270.237 kb on - strand, within B158DRAFT_1231at 1270.347 kb on - strand, within B158DRAFT_1231at 1270.414 kb on - strandat 1270.496 kb on + strandat 1270.524 kb on - strandat 1270.524 kb on - strandat 1270.711 kb on + strandat 1270.737 kb on + strand, within B158DRAFT_1232at 1270.745 kb on - strand, within B158DRAFT_1232at 1270.754 kb on - strand, within B158DRAFT_1232at 1270.763 kb on + strand, within B158DRAFT_1232at 1270.766 kb on - strand, within B158DRAFT_1232at 1270.849 kb on - strand, within B158DRAFT_1232at 1270.875 kb on + strand, within B158DRAFT_1232at 1270.875 kb on + strand, within B158DRAFT_1232at 1270.883 kb on - strand, within B158DRAFT_1232at 1270.883 kb on - strand, within B158DRAFT_1232at 1270.883 kb on - strand, within B158DRAFT_1232at 1270.883 kb on - strand, within B158DRAFT_1232at 1270.883 kb on - strand, within B158DRAFT_1232at 1270.883 kb on - strand, within B158DRAFT_1232at 1270.883 kb on - strand, within B158DRAFT_1232at 1270.906 kb on + strand, within B158DRAFT_1232at 1270.922 kb on + strandat 1271.297 kb on + strandat 1271.297 kb on + strandat 1271.338 kb on - strand, within B158DRAFT_1233at 1271.341 kb on - strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.347 kb on + strand, within B158DRAFT_1233at 1271.348 kb on - strand, within B158DRAFT_1233at 1271.355 kb on - strand, within B158DRAFT_1233at 1271.355 kb on - strand, within B158DRAFT_1233at 1271.355 kb on - strand, within B158DRAFT_1233at 1271.355 kb on - strand, within B158DRAFT_1233at 1271.357 kb on + strand, within B158DRAFT_1233at 1271.357 kb on + strand, within B158DRAFT_1233at 1271.362 kb on + strand, within B158DRAFT_1233at 1271.365 kb on - strand, within B158DRAFT_1233at 1271.365 kb on - strand, within B158DRAFT_1233at 1271.365 kb on - strand, within B158DRAFT_1233at 1271.365 kb on - strand, within B158DRAFT_1233at 1271.365 kb on - strand, within B158DRAFT_1233at 1271.370 kb on - strand, within B158DRAFT_1233at 1271.370 kb on - strand, within B158DRAFT_1233at 1271.390 kb on - strand, within B158DRAFT_1233at 1271.396 kb on + strand, within B158DRAFT_1233at 1271.396 kb on + strand, within B158DRAFT_1233at 1271.397 kb on - strand, within B158DRAFT_1233at 1271.404 kb on - strand, within B158DRAFT_1233at 1271.404 kb on - strand, within B158DRAFT_1233at 1271.414 kb on - strand, within B158DRAFT_1233at 1271.428 kb on + strand, within B158DRAFT_1233at 1271.428 kb on + strand, within B158DRAFT_1233at 1271.451 kb on + strand, within B158DRAFT_1233at 1271.451 kb on + strand, within B158DRAFT_1233

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml
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1,269,053 - B158DRAFT_1229 0.74 -0.6
1,269,225 + +0.2
1,269,233 - -2.0
1,269,243 + -1.1
1,269,243 - -1.1
1,269,267 + -1.4
1,269,269 - -0.2
1,269,276 + -5.6
1,269,276 + +0.2
1,269,284 - -0.2
1,269,288 + -0.1
1,269,306 + B158DRAFT_1230 0.10 +0.0
1,269,306 + B158DRAFT_1230 0.10 +0.3
1,269,307 + B158DRAFT_1230 0.10 -0.2
1,269,334 + B158DRAFT_1230 0.14 +0.7
1,269,419 - B158DRAFT_1230 0.27 +0.4
1,269,432 + B158DRAFT_1230 0.29 -0.4
1,269,448 - B158DRAFT_1230 0.31 -2.0
1,269,468 + B158DRAFT_1230 0.34 -0.3
1,269,473 + B158DRAFT_1230 0.35 -0.2
1,269,476 - B158DRAFT_1230 0.35 -1.5
1,269,533 + B158DRAFT_1230 0.43 -4.8
1,269,542 + B158DRAFT_1230 0.45 -0.5
1,269,701 + B158DRAFT_1230 0.68 -4.4
1,269,701 + B158DRAFT_1230 0.68 +0.0
1,269,719 - B158DRAFT_1230 0.71 -1.9
1,269,719 - B158DRAFT_1230 0.71 +0.3
1,269,736 - B158DRAFT_1230 0.73 -1.4
1,269,757 + B158DRAFT_1230 0.76 -2.4
1,269,762 + B158DRAFT_1230 0.77 -0.5
1,269,762 + B158DRAFT_1230 0.77 +1.1
1,269,765 - B158DRAFT_1230 0.78 -0.5
1,269,770 - B158DRAFT_1230 0.78 +0.7
1,269,854 + +0.3
1,269,854 + +0.3
1,269,854 + +0.1
1,269,854 + -0.7
1,269,854 + +0.1
1,269,854 + -3.6
1,269,854 + -0.7
1,269,854 + -0.2
1,269,854 + +0.6
1,269,854 + -3.9
1,269,854 + +1.1
1,269,854 + -1.5
1,269,854 + +1.2
1,269,854 + +0.7
1,269,854 + +1.0
1,269,854 + +0.2
1,269,862 - +0.5
1,269,862 - +0.7
1,269,862 - -0.1
1,269,862 - -3.2
1,269,862 - +1.0
1,269,862 - -1.9
1,269,862 - -1.2
1,269,862 - -1.0
1,269,862 - -0.2
1,269,862 - -0.2
1,269,862 - +0.4
1,269,862 - -0.6
1,269,862 - -0.3
1,269,901 + +0.1
1,269,909 - -0.3
1,269,909 - -0.9
1,269,910 - -0.6
1,269,910 - +0.1
1,269,939 + -0.0
1,269,939 + +0.9
1,269,939 + +1.5
1,269,939 + +0.5
1,269,939 + -0.0
1,269,939 + -5.3
1,269,947 - +0.9
1,269,947 - -1.1
1,269,952 - -0.2
1,269,952 - +0.7
1,270,099 + B158DRAFT_1231 0.26 -0.2
1,270,099 + B158DRAFT_1231 0.26 -2.8
1,270,107 - B158DRAFT_1231 0.28 -1.2
1,270,107 - B158DRAFT_1231 0.28 -3.9
1,270,135 + B158DRAFT_1231 0.34 -0.4
1,270,135 + B158DRAFT_1231 0.34 +0.3
1,270,135 + B158DRAFT_1231 0.34 -0.3
1,270,135 + B158DRAFT_1231 0.34 -0.9
1,270,141 - B158DRAFT_1231 0.35 +0.2
1,270,143 - B158DRAFT_1231 0.35 -5.7
1,270,215 + B158DRAFT_1231 0.50 +1.0
1,270,237 - B158DRAFT_1231 0.55 +0.7
1,270,347 - B158DRAFT_1231 0.78 -0.1
1,270,414 - +0.6
1,270,496 + -0.8
1,270,524 - -2.7
1,270,524 - -5.6
1,270,711 + +1.5
1,270,737 + B158DRAFT_1232 0.14 +0.2
1,270,745 - B158DRAFT_1232 0.18 +0.5
1,270,754 - B158DRAFT_1232 0.22 -0.3
1,270,763 + B158DRAFT_1232 0.26 -2.8
1,270,766 - B158DRAFT_1232 0.27 -0.1
1,270,849 - B158DRAFT_1232 0.63 +1.2
1,270,875 + B158DRAFT_1232 0.74 -4.8
1,270,875 + B158DRAFT_1232 0.74 -5.0
1,270,883 - B158DRAFT_1232 0.77 +0.4
1,270,883 - B158DRAFT_1232 0.77 +0.6
1,270,883 - B158DRAFT_1232 0.77 -0.6
1,270,883 - B158DRAFT_1232 0.77 -2.0
1,270,883 - B158DRAFT_1232 0.77 -1.3
1,270,883 - B158DRAFT_1232 0.77 +0.0
1,270,883 - B158DRAFT_1232 0.77 -5.1
1,270,906 + B158DRAFT_1232 0.87 -2.0
1,270,922 + +0.7
1,271,297 + -0.9
1,271,297 + +0.2
1,271,338 - B158DRAFT_1233 0.14 -1.2
1,271,341 - B158DRAFT_1233 0.14 +0.2
1,271,347 + B158DRAFT_1233 0.15 -5.2
1,271,347 + B158DRAFT_1233 0.15 +0.3
1,271,347 + B158DRAFT_1233 0.15 +0.9
1,271,347 + B158DRAFT_1233 0.15 -0.6
1,271,347 + B158DRAFT_1233 0.15 -4.7
1,271,347 + B158DRAFT_1233 0.15 +0.3
1,271,347 + B158DRAFT_1233 0.15 +1.5
1,271,347 + B158DRAFT_1233 0.15 -0.7
1,271,348 - B158DRAFT_1233 0.16 -0.3
1,271,355 - B158DRAFT_1233 0.17 +0.1
1,271,355 - B158DRAFT_1233 0.17 +0.2
1,271,355 - B158DRAFT_1233 0.17 -0.4
1,271,355 - B158DRAFT_1233 0.17 +0.0
1,271,357 + B158DRAFT_1233 0.17 -0.8
1,271,357 + B158DRAFT_1233 0.17 +0.3
1,271,362 + B158DRAFT_1233 0.18 -0.2
1,271,365 - B158DRAFT_1233 0.19 +0.1
1,271,365 - B158DRAFT_1233 0.19 +0.3
1,271,365 - B158DRAFT_1233 0.19 +0.4
1,271,365 - B158DRAFT_1233 0.19 +1.0
1,271,365 - B158DRAFT_1233 0.19 -0.8
1,271,370 - B158DRAFT_1233 0.19 -0.6
1,271,370 - B158DRAFT_1233 0.19 +1.0
1,271,390 - B158DRAFT_1233 0.23 -1.7
1,271,396 + B158DRAFT_1233 0.24 -0.2
1,271,396 + B158DRAFT_1233 0.24 -1.1
1,271,397 - B158DRAFT_1233 0.24 -4.2
1,271,404 - B158DRAFT_1233 0.25 +1.0
1,271,404 - B158DRAFT_1233 0.25 -0.3
1,271,414 - B158DRAFT_1233 0.27 +0.5
1,271,428 + B158DRAFT_1233 0.30 +0.7
1,271,428 + B158DRAFT_1233 0.30 -0.6
1,271,451 + B158DRAFT_1233 0.34 -1.4
1,271,451 + B158DRAFT_1233 0.34 -0.6

Or see this region's nucleotide sequence