Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1102 and B158DRAFT_1103 are separated by 311 nucleotides B158DRAFT_1103 and B158DRAFT_1104 are separated by 190 nucleotides
B158DRAFT_1102: B158DRAFT_1102 - hypothetical protein, at 1,140,978 to 1,141,652
_1102
B158DRAFT_1103: B158DRAFT_1103 - hypothetical protein, at 1,141,964 to 1,142,275
_1103
B158DRAFT_1104: B158DRAFT_1104 - Putative intracellular protease/amidase, at 1,142,466 to 1,143,143
_1104
Position (kb)
1141
1142
1143 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2 at 1140.966 kb on - strand at 1140.969 kb on + strand at 1141.112 kb on - strand, within B158DRAFT_1102 at 1141.180 kb on + strand, within B158DRAFT_1102 at 1141.180 kb on + strand, within B158DRAFT_1102 at 1141.220 kb on + strand, within B158DRAFT_1102 at 1141.260 kb on + strand, within B158DRAFT_1102 at 1141.423 kb on - strand, within B158DRAFT_1102 at 1141.500 kb on + strand, within B158DRAFT_1102 at 1141.510 kb on + strand, within B158DRAFT_1102 at 1141.532 kb on + strand, within B158DRAFT_1102 at 1141.532 kb on + strand, within B158DRAFT_1102 at 1141.532 kb on + strand, within B158DRAFT_1102 at 1141.540 kb on - strand, within B158DRAFT_1102 at 1141.540 kb on - strand, within B158DRAFT_1102 at 1141.540 kb on - strand, within B158DRAFT_1102 at 1141.540 kb on - strand, within B158DRAFT_1102 at 1141.540 kb on - strand, within B158DRAFT_1102 at 1141.840 kb on + strand at 1141.848 kb on - strand at 1141.850 kb on + strand at 1141.899 kb on + strand at 1142.007 kb on + strand, within B158DRAFT_1103 at 1142.024 kb on - strand, within B158DRAFT_1103 at 1142.043 kb on + strand, within B158DRAFT_1103 at 1142.051 kb on - strand, within B158DRAFT_1103 at 1142.053 kb on + strand, within B158DRAFT_1103 at 1142.178 kb on - strand, within B158DRAFT_1103 at 1142.187 kb on + strand, within B158DRAFT_1103 at 1142.193 kb on - strand, within B158DRAFT_1103 at 1142.203 kb on + strand, within B158DRAFT_1103 at 1142.244 kb on - strand at 1142.244 kb on - strand at 1142.244 kb on - strand at 1142.311 kb on + strand at 1142.311 kb on + strand at 1142.319 kb on - strand at 1142.319 kb on - strand at 1142.319 kb on - strand at 1142.322 kb on + strand at 1142.322 kb on + strand at 1142.322 kb on + strand at 1142.322 kb on + strand at 1142.322 kb on + strand at 1142.322 kb on + strand at 1142.322 kb on + strand at 1142.322 kb on + strand at 1142.322 kb on + strand at 1142.322 kb on + strand at 1142.322 kb on + strand at 1142.322 kb on + strand at 1142.322 kb on + strand at 1142.322 kb on + strand at 1142.330 kb on - strand at 1142.330 kb on - strand at 1142.330 kb on - strand at 1142.330 kb on - strand at 1142.330 kb on - strand at 1142.330 kb on - strand at 1142.330 kb on - strand at 1142.330 kb on - strand at 1142.330 kb on - strand at 1142.390 kb on - strand at 1142.420 kb on + strand at 1142.428 kb on - strand at 1142.448 kb on + strand at 1142.456 kb on - strand at 1142.456 kb on - strand at 1142.526 kb on + strand at 1142.541 kb on - strand, within B158DRAFT_1104 at 1142.595 kb on + strand, within B158DRAFT_1104 at 1142.615 kb on + strand, within B158DRAFT_1104 at 1142.623 kb on - strand, within B158DRAFT_1104 at 1142.799 kb on + strand, within B158DRAFT_1104 at 1142.807 kb on - strand, within B158DRAFT_1104 at 1142.817 kb on - strand, within B158DRAFT_1104 at 1142.817 kb on - strand, within B158DRAFT_1104 at 1142.885 kb on - strand, within B158DRAFT_1104 at 1142.890 kb on - strand, within B158DRAFT_1104 at 1142.947 kb on + strand, within B158DRAFT_1104 at 1142.955 kb on - strand, within B158DRAFT_1104 at 1142.964 kb on - strand, within B158DRAFT_1104 at 1143.034 kb on - strand, within B158DRAFT_1104 at 1143.084 kb on + strand at 1143.091 kb on + strand at 1143.125 kb on + strand at 1143.133 kb on - strand at 1143.133 kb on - strand at 1143.181 kb on + strand at 1143.181 kb on + strand at 1143.181 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 1,140,966 - +0.4 1,140,969 + +0.5 1,141,112 - B158DRAFT_1102 0.20 -0.3 1,141,180 + B158DRAFT_1102 0.30 -0.7 1,141,180 + B158DRAFT_1102 0.30 +1.0 1,141,220 + B158DRAFT_1102 0.36 -2.8 1,141,260 + B158DRAFT_1102 0.42 +0.3 1,141,423 - B158DRAFT_1102 0.66 -0.0 1,141,500 + B158DRAFT_1102 0.77 -0.6 1,141,510 + B158DRAFT_1102 0.79 -0.2 1,141,532 + B158DRAFT_1102 0.82 -0.8 1,141,532 + B158DRAFT_1102 0.82 -4.9 1,141,532 + B158DRAFT_1102 0.82 +1.0 1,141,540 - B158DRAFT_1102 0.83 +0.0 1,141,540 - B158DRAFT_1102 0.83 +0.1 1,141,540 - B158DRAFT_1102 0.83 -1.0 1,141,540 - B158DRAFT_1102 0.83 -4.2 1,141,540 - B158DRAFT_1102 0.83 -4.4 1,141,840 + -0.4 1,141,848 - +0.3 1,141,850 + -1.6 1,141,899 + -1.4 1,142,007 + B158DRAFT_1103 0.14 -3.9 1,142,024 - B158DRAFT_1103 0.19 +0.3 1,142,043 + B158DRAFT_1103 0.25 -1.6 1,142,051 - B158DRAFT_1103 0.28 -0.4 1,142,053 + B158DRAFT_1103 0.29 -4.1 1,142,178 - B158DRAFT_1103 0.69 -0.2 1,142,187 + B158DRAFT_1103 0.71 +1.4 1,142,193 - B158DRAFT_1103 0.73 -0.8 1,142,203 + B158DRAFT_1103 0.77 -0.3 1,142,244 - +0.8 1,142,244 - -0.1 1,142,244 - -0.1 1,142,311 + +0.5 1,142,311 + -0.7 1,142,319 - -4.6 1,142,319 - -0.5 1,142,319 - -2.8 1,142,322 + -0.0 1,142,322 + -0.5 1,142,322 + -1.1 1,142,322 + +0.8 1,142,322 + +0.7 1,142,322 + +0.2 1,142,322 + -1.8 1,142,322 + -0.8 1,142,322 + -0.0 1,142,322 + -0.8 1,142,322 + +0.5 1,142,322 + +0.2 1,142,322 + -0.1 1,142,322 + -1.3 1,142,330 - +0.3 1,142,330 - +0.6 1,142,330 - -1.4 1,142,330 - -0.7 1,142,330 - +0.5 1,142,330 - -0.0 1,142,330 - +0.1 1,142,330 - -0.3 1,142,330 - -0.5 1,142,390 - +0.3 1,142,420 + -4.0 1,142,428 - +0.4 1,142,448 + -5.1 1,142,456 - +0.1 1,142,456 - -5.9 1,142,526 + -0.2 1,142,541 - B158DRAFT_1104 0.11 -0.2 1,142,595 + B158DRAFT_1104 0.19 -0.0 1,142,615 + B158DRAFT_1104 0.22 +0.5 1,142,623 - B158DRAFT_1104 0.23 +0.1 1,142,799 + B158DRAFT_1104 0.49 +2.0 1,142,807 - B158DRAFT_1104 0.50 +0.6 1,142,817 - B158DRAFT_1104 0.52 -0.5 1,142,817 - B158DRAFT_1104 0.52 +0.3 1,142,885 - B158DRAFT_1104 0.62 +0.2 1,142,890 - B158DRAFT_1104 0.63 -0.1 1,142,947 + B158DRAFT_1104 0.71 +1.2 1,142,955 - B158DRAFT_1104 0.72 +0.2 1,142,964 - B158DRAFT_1104 0.73 +0.4 1,143,034 - B158DRAFT_1104 0.84 +0.8 1,143,084 + -4.4 1,143,091 + -0.4 1,143,125 + +0.3 1,143,133 - +0.5 1,143,133 - +0.5 1,143,181 + +0.2 1,143,181 + -0.1 1,143,181 + -0.2
Or see this region's nucleotide sequence