Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0949 and B158DRAFT_0950 are separated by 1 nucleotides B158DRAFT_0950 and B158DRAFT_0951 are separated by 17 nucleotides B158DRAFT_0951 and B158DRAFT_0952 are separated by 6 nucleotides
B158DRAFT_0949: B158DRAFT_0949 - ABC-type transport system, involved in lipoprotein release, permease component, at 977,294 to 978,496
_0949
B158DRAFT_0950: B158DRAFT_0950 - ABC-type antimicrobial peptide transport system, ATPase component, at 978,498 to 979,211
_0950
B158DRAFT_0951: B158DRAFT_0951 - Cytochrome C', at 979,229 to 979,708
_0951
B158DRAFT_0952: B158DRAFT_0952 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 979,715 to 981,181
_0952
Position (kb) 978
979
980 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 977.539 kb on - strand, within B158DRAFT_0949 at 977.542 kb on + strand, within B158DRAFT_0949 at 977.550 kb on - strand, within B158DRAFT_0949 at 977.590 kb on - strand, within B158DRAFT_0949 at 977.592 kb on + strand, within B158DRAFT_0949 at 977.592 kb on + strand, within B158DRAFT_0949 at 977.594 kb on + strand, within B158DRAFT_0949 at 977.651 kb on - strand, within B158DRAFT_0949 at 977.656 kb on - strand, within B158DRAFT_0949 at 977.743 kb on + strand, within B158DRAFT_0949 at 977.780 kb on - strand, within B158DRAFT_0949 at 977.799 kb on + strand, within B158DRAFT_0949 at 977.858 kb on + strand, within B158DRAFT_0949 at 977.957 kb on + strand, within B158DRAFT_0949 at 977.957 kb on + strand, within B158DRAFT_0949 at 977.957 kb on + strand, within B158DRAFT_0949 at 977.957 kb on + strand, within B158DRAFT_0949 at 977.957 kb on + strand, within B158DRAFT_0949 at 977.957 kb on + strand, within B158DRAFT_0949 at 977.965 kb on - strand, within B158DRAFT_0949 at 977.965 kb on - strand, within B158DRAFT_0949 at 978.018 kb on - strand, within B158DRAFT_0949 at 978.167 kb on + strand, within B158DRAFT_0949 at 978.169 kb on + strand, within B158DRAFT_0949 at 978.299 kb on - strand, within B158DRAFT_0949 at 978.315 kb on + strand, within B158DRAFT_0949 at 978.393 kb on - strand at 978.448 kb on + strand at 978.448 kb on + strand at 978.456 kb on - strand at 978.492 kb on + strand at 978.492 kb on + strand at 978.500 kb on - strand at 978.590 kb on + strand, within B158DRAFT_0950 at 978.625 kb on - strand, within B158DRAFT_0950 at 978.658 kb on + strand, within B158DRAFT_0950 at 978.906 kb on + strand, within B158DRAFT_0950 at 978.906 kb on + strand, within B158DRAFT_0950 at 978.911 kb on + strand, within B158DRAFT_0950 at 978.925 kb on - strand, within B158DRAFT_0950 at 978.956 kb on + strand, within B158DRAFT_0950 at 979.018 kb on + strand, within B158DRAFT_0950 at 979.045 kb on + strand, within B158DRAFT_0950 at 979.193 kb on - strand at 979.198 kb on - strand at 979.198 kb on - strand at 979.225 kb on - strand at 979.320 kb on - strand, within B158DRAFT_0951 at 979.648 kb on + strand, within B158DRAFT_0951 at 979.792 kb on + strand at 979.869 kb on + strand, within B158DRAFT_0952 at 979.974 kb on + strand, within B158DRAFT_0952 at 980.010 kb on + strand, within B158DRAFT_0952 at 980.010 kb on + strand, within B158DRAFT_0952 at 980.010 kb on + strand, within B158DRAFT_0952 at 980.010 kb on + strand, within B158DRAFT_0952 at 980.018 kb on - strand, within B158DRAFT_0952 at 980.018 kb on - strand, within B158DRAFT_0952 at 980.029 kb on + strand, within B158DRAFT_0952 at 980.187 kb on + strand, within B158DRAFT_0952 at 980.195 kb on - strand, within B158DRAFT_0952 at 980.210 kb on - strand, within B158DRAFT_0952
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 977,539 - B158DRAFT_0949 0.20 +0.8 977,542 + B158DRAFT_0949 0.21 +1.1 977,550 - B158DRAFT_0949 0.21 +0.4 977,590 - B158DRAFT_0949 0.25 -0.3 977,592 + B158DRAFT_0949 0.25 +0.2 977,592 + B158DRAFT_0949 0.25 -1.6 977,594 + B158DRAFT_0949 0.25 +0.4 977,651 - B158DRAFT_0949 0.30 -0.8 977,656 - B158DRAFT_0949 0.30 -0.4 977,743 + B158DRAFT_0949 0.37 -0.6 977,780 - B158DRAFT_0949 0.40 -3.3 977,799 + B158DRAFT_0949 0.42 -1.4 977,858 + B158DRAFT_0949 0.47 -3.3 977,957 + B158DRAFT_0949 0.55 -0.9 977,957 + B158DRAFT_0949 0.55 +0.3 977,957 + B158DRAFT_0949 0.55 +0.5 977,957 + B158DRAFT_0949 0.55 +0.3 977,957 + B158DRAFT_0949 0.55 -4.1 977,957 + B158DRAFT_0949 0.55 -1.4 977,965 - B158DRAFT_0949 0.56 +1.3 977,965 - B158DRAFT_0949 0.56 -0.0 978,018 - B158DRAFT_0949 0.60 +0.4 978,167 + B158DRAFT_0949 0.73 -0.6 978,169 + B158DRAFT_0949 0.73 -4.6 978,299 - B158DRAFT_0949 0.84 -0.2 978,315 + B158DRAFT_0949 0.85 +0.1 978,393 - +0.5 978,448 + +0.3 978,448 + +1.2 978,456 - -1.0 978,492 + -3.6 978,492 + +0.6 978,500 - +0.4 978,590 + B158DRAFT_0950 0.13 -0.5 978,625 - B158DRAFT_0950 0.18 -1.4 978,658 + B158DRAFT_0950 0.22 +0.1 978,906 + B158DRAFT_0950 0.57 -3.6 978,906 + B158DRAFT_0950 0.57 -3.5 978,911 + B158DRAFT_0950 0.58 -0.7 978,925 - B158DRAFT_0950 0.60 +0.6 978,956 + B158DRAFT_0950 0.64 +0.4 979,018 + B158DRAFT_0950 0.73 -0.4 979,045 + B158DRAFT_0950 0.77 +0.1 979,193 - -0.1 979,198 - +0.6 979,198 - +0.7 979,225 - +0.8 979,320 - B158DRAFT_0951 0.19 -0.5 979,648 + B158DRAFT_0951 0.87 -4.3 979,792 + +1.8 979,869 + B158DRAFT_0952 0.10 -2.1 979,974 + B158DRAFT_0952 0.18 +0.2 980,010 + B158DRAFT_0952 0.20 -2.4 980,010 + B158DRAFT_0952 0.20 -0.1 980,010 + B158DRAFT_0952 0.20 -1.4 980,010 + B158DRAFT_0952 0.20 +0.4 980,018 - B158DRAFT_0952 0.21 -4.4 980,018 - B158DRAFT_0952 0.21 +1.3 980,029 + B158DRAFT_0952 0.21 -0.6 980,187 + B158DRAFT_0952 0.32 +3.0 980,195 - B158DRAFT_0952 0.33 +1.0 980,210 - B158DRAFT_0952 0.34 +1.1
Or see this region's nucleotide sequence