Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0792 and B158DRAFT_0793 overlap by 4 nucleotides B158DRAFT_0793 and B158DRAFT_0794 are separated by 2 nucleotides B158DRAFT_0794 and B158DRAFT_0795 are separated by 29 nucleotides B158DRAFT_0795 and B158DRAFT_0796 are separated by 36 nucleotides
B158DRAFT_0792: B158DRAFT_0792 - Predicted phosphotransferase related to Ser/Thr protein kinases, at 797,150 to 798,184
_0792
B158DRAFT_0793: B158DRAFT_0793 - Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon), at 798,181 to 798,885
_0793
B158DRAFT_0794: B158DRAFT_0794 - DnaJ-domain-containing proteins 1, at 798,888 to 799,700
_0794
B158DRAFT_0795: B158DRAFT_0795 - Uncharacterized protein conserved in bacteria, at 799,730 to 800,371
_0795
B158DRAFT_0796: B158DRAFT_0796 - NAD-dependent protein deacetylases, SIR2 family, at 800,408 to 801,142
_0796
Position (kb) 798
799
800 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 797.897 kb on - strand, within B158DRAFT_0792 at 797.985 kb on - strand, within B158DRAFT_0792 at 798.047 kb on + strand, within B158DRAFT_0792 at 798.056 kb on - strand, within B158DRAFT_0792 at 798.085 kb on - strand at 798.105 kb on - strand at 798.126 kb on + strand at 798.126 kb on + strand at 798.126 kb on + strand at 798.134 kb on - strand at 798.134 kb on - strand at 798.134 kb on - strand at 798.134 kb on - strand at 798.251 kb on - strand at 798.251 kb on - strand at 798.251 kb on - strand at 798.338 kb on + strand, within B158DRAFT_0793 at 798.472 kb on + strand, within B158DRAFT_0793 at 798.506 kb on + strand, within B158DRAFT_0793 at 798.511 kb on + strand, within B158DRAFT_0793 at 798.517 kb on + strand, within B158DRAFT_0793 at 798.549 kb on - strand, within B158DRAFT_0793 at 798.624 kb on + strand, within B158DRAFT_0793 at 798.624 kb on + strand, within B158DRAFT_0793 at 798.624 kb on + strand, within B158DRAFT_0793 at 798.624 kb on + strand, within B158DRAFT_0793 at 798.632 kb on - strand, within B158DRAFT_0793 at 798.632 kb on - strand, within B158DRAFT_0793 at 798.632 kb on - strand, within B158DRAFT_0793 at 798.641 kb on + strand, within B158DRAFT_0793 at 798.686 kb on + strand, within B158DRAFT_0793 at 798.714 kb on - strand, within B158DRAFT_0793 at 798.914 kb on - strand at 798.914 kb on - strand at 798.914 kb on - strand at 798.917 kb on + strand at 798.954 kb on + strand at 798.962 kb on - strand at 798.964 kb on + strand at 798.964 kb on + strand at 798.974 kb on - strand, within B158DRAFT_0794 at 798.974 kb on - strand, within B158DRAFT_0794 at 799.011 kb on - strand, within B158DRAFT_0794 at 799.011 kb on - strand, within B158DRAFT_0794 at 799.062 kb on + strand, within B158DRAFT_0794 at 799.292 kb on - strand, within B158DRAFT_0794 at 799.328 kb on + strand, within B158DRAFT_0794 at 799.328 kb on + strand, within B158DRAFT_0794 at 799.336 kb on - strand, within B158DRAFT_0794 at 799.402 kb on - strand, within B158DRAFT_0794 at 799.430 kb on + strand, within B158DRAFT_0794 at 799.432 kb on + strand, within B158DRAFT_0794 at 799.492 kb on + strand, within B158DRAFT_0794 at 799.492 kb on + strand, within B158DRAFT_0794 at 799.492 kb on + strand, within B158DRAFT_0794 at 799.492 kb on + strand, within B158DRAFT_0794 at 799.497 kb on + strand, within B158DRAFT_0794 at 799.497 kb on + strand, within B158DRAFT_0794 at 799.500 kb on - strand, within B158DRAFT_0794 at 799.500 kb on - strand, within B158DRAFT_0794 at 799.588 kb on - strand, within B158DRAFT_0794 at 800.426 kb on + strand at 800.434 kb on - strand at 800.446 kb on + strand at 800.539 kb on - strand, within B158DRAFT_0796 at 800.552 kb on + strand, within B158DRAFT_0796 at 800.558 kb on - strand, within B158DRAFT_0796 at 800.568 kb on + strand, within B158DRAFT_0796 at 800.576 kb on - strand, within B158DRAFT_0796 at 800.576 kb on - strand, within B158DRAFT_0796 at 800.647 kb on + strand, within B158DRAFT_0796 at 800.647 kb on + strand, within B158DRAFT_0796 at 800.655 kb on - strand, within B158DRAFT_0796
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 797,897 - B158DRAFT_0792 0.72 -0.6 797,985 - B158DRAFT_0792 0.81 +2.4 798,047 + B158DRAFT_0792 0.87 -1.1 798,056 - B158DRAFT_0792 0.88 -1.4 798,085 - -2.9 798,105 - -4.3 798,126 + -0.1 798,126 + -2.4 798,126 + -0.7 798,134 - -3.8 798,134 - +0.6 798,134 - -0.6 798,134 - +1.0 798,251 - +1.2 798,251 - -2.3 798,251 - +0.5 798,338 + B158DRAFT_0793 0.22 -2.0 798,472 + B158DRAFT_0793 0.41 +0.7 798,506 + B158DRAFT_0793 0.46 -2.1 798,511 + B158DRAFT_0793 0.47 -3.1 798,517 + B158DRAFT_0793 0.48 -2.7 798,549 - B158DRAFT_0793 0.52 -2.3 798,624 + B158DRAFT_0793 0.63 -2.3 798,624 + B158DRAFT_0793 0.63 -2.1 798,624 + B158DRAFT_0793 0.63 +0.6 798,624 + B158DRAFT_0793 0.63 -4.3 798,632 - B158DRAFT_0793 0.64 -2.8 798,632 - B158DRAFT_0793 0.64 +0.6 798,632 - B158DRAFT_0793 0.64 +0.9 798,641 + B158DRAFT_0793 0.65 +0.2 798,686 + B158DRAFT_0793 0.72 +1.8 798,714 - B158DRAFT_0793 0.76 -3.3 798,914 - -1.2 798,914 - +0.2 798,914 - -0.8 798,917 + -1.1 798,954 + -1.5 798,962 - +0.6 798,964 + -0.4 798,964 + +0.6 798,974 - B158DRAFT_0794 0.11 -0.2 798,974 - B158DRAFT_0794 0.11 -3.6 799,011 - B158DRAFT_0794 0.15 -4.8 799,011 - B158DRAFT_0794 0.15 -0.0 799,062 + B158DRAFT_0794 0.21 +0.0 799,292 - B158DRAFT_0794 0.50 -2.9 799,328 + B158DRAFT_0794 0.54 -0.5 799,328 + B158DRAFT_0794 0.54 -2.1 799,336 - B158DRAFT_0794 0.55 -1.4 799,402 - B158DRAFT_0794 0.63 +0.9 799,430 + B158DRAFT_0794 0.67 -0.0 799,432 + B158DRAFT_0794 0.67 -0.8 799,492 + B158DRAFT_0794 0.74 -0.3 799,492 + B158DRAFT_0794 0.74 -0.9 799,492 + B158DRAFT_0794 0.74 -2.6 799,492 + B158DRAFT_0794 0.74 +0.5 799,497 + B158DRAFT_0794 0.75 +0.3 799,497 + B158DRAFT_0794 0.75 -0.4 799,500 - B158DRAFT_0794 0.75 -0.9 799,500 - B158DRAFT_0794 0.75 -0.0 799,588 - B158DRAFT_0794 0.86 -1.1 800,426 + +0.2 800,434 - -0.8 800,446 + -1.6 800,539 - B158DRAFT_0796 0.18 -0.0 800,552 + B158DRAFT_0796 0.20 -1.0 800,558 - B158DRAFT_0796 0.20 -0.3 800,568 + B158DRAFT_0796 0.22 -0.2 800,576 - B158DRAFT_0796 0.23 -0.3 800,576 - B158DRAFT_0796 0.23 +0.0 800,647 + B158DRAFT_0796 0.33 +0.1 800,647 + B158DRAFT_0796 0.33 -0.5 800,655 - B158DRAFT_0796 0.34 +0.4
Or see this region's nucleotide sequence