Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0669

Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0667 and B158DRAFT_0668 are separated by 131 nucleotidesB158DRAFT_0668 and B158DRAFT_0669 overlap by 20 nucleotidesB158DRAFT_0669 and B158DRAFT_0670 are separated by 13 nucleotides B158DRAFT_0667: B158DRAFT_0667 - Protein of unknown function (DUF2909)., at 671,059 to 671,343 _0667 B158DRAFT_0668: B158DRAFT_0668 - Uncharacterized conserved protein, at 671,475 to 672,260 _0668 B158DRAFT_0669: B158DRAFT_0669 - hypothetical protein, at 672,241 to 672,852 _0669 B158DRAFT_0670: B158DRAFT_0670 - Uncharacterized protein required for cytochrome oxidase assembly, at 672,866 to 673,975 _0670 Position (kb) 672 673Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 671.261 kb on + strand, within B158DRAFT_0667at 671.485 kb on - strandat 671.510 kb on + strandat 671.515 kb on + strandat 671.523 kb on - strandat 671.526 kb on + strandat 671.602 kb on - strand, within B158DRAFT_0668at 671.651 kb on + strand, within B158DRAFT_0668at 671.656 kb on + strand, within B158DRAFT_0668at 671.688 kb on - strand, within B158DRAFT_0668at 671.694 kb on + strand, within B158DRAFT_0668at 671.704 kb on + strand, within B158DRAFT_0668at 671.704 kb on + strand, within B158DRAFT_0668at 671.712 kb on - strand, within B158DRAFT_0668at 671.712 kb on - strand, within B158DRAFT_0668at 671.712 kb on - strand, within B158DRAFT_0668at 671.712 kb on - strand, within B158DRAFT_0668at 671.713 kb on - strand, within B158DRAFT_0668at 671.727 kb on + strand, within B158DRAFT_0668at 671.764 kb on + strand, within B158DRAFT_0668at 671.771 kb on - strand, within B158DRAFT_0668at 671.772 kb on + strand, within B158DRAFT_0668at 671.777 kb on + strand, within B158DRAFT_0668at 671.802 kb on - strand, within B158DRAFT_0668at 671.846 kb on + strand, within B158DRAFT_0668at 671.913 kb on + strand, within B158DRAFT_0668at 671.921 kb on - strand, within B158DRAFT_0668at 671.921 kb on - strand, within B158DRAFT_0668at 671.928 kb on + strand, within B158DRAFT_0668at 671.928 kb on - strand, within B158DRAFT_0668at 671.950 kb on + strand, within B158DRAFT_0668at 672.057 kb on - strand, within B158DRAFT_0668at 672.098 kb on + strand, within B158DRAFT_0668at 672.100 kb on - strand, within B158DRAFT_0668at 672.104 kb on - strand, within B158DRAFT_0668at 672.141 kb on + strand, within B158DRAFT_0668at 672.168 kb on + strand, within B158DRAFT_0668at 672.235 kb on + strandat 672.312 kb on - strand, within B158DRAFT_0669at 672.348 kb on + strand, within B158DRAFT_0669at 672.368 kb on - strand, within B158DRAFT_0669at 672.386 kb on + strand, within B158DRAFT_0669at 672.409 kb on - strand, within B158DRAFT_0669at 672.466 kb on - strand, within B158DRAFT_0669at 672.478 kb on + strand, within B158DRAFT_0669at 672.545 kb on + strand, within B158DRAFT_0669at 672.545 kb on + strand, within B158DRAFT_0669at 672.550 kb on + strand, within B158DRAFT_0669at 672.550 kb on + strand, within B158DRAFT_0669at 672.550 kb on + strand, within B158DRAFT_0669at 672.550 kb on + strand, within B158DRAFT_0669at 672.551 kb on + strand, within B158DRAFT_0669at 672.553 kb on - strand, within B158DRAFT_0669at 672.553 kb on - strand, within B158DRAFT_0669at 672.553 kb on - strand, within B158DRAFT_0669at 672.558 kb on - strand, within B158DRAFT_0669at 672.558 kb on - strand, within B158DRAFT_0669at 672.637 kb on + strand, within B158DRAFT_0669at 672.637 kb on + strand, within B158DRAFT_0669at 672.637 kb on + strand, within B158DRAFT_0669at 672.637 kb on + strand, within B158DRAFT_0669at 672.637 kb on + strand, within B158DRAFT_0669at 672.637 kb on + strand, within B158DRAFT_0669at 672.645 kb on - strand, within B158DRAFT_0669at 672.645 kb on - strand, within B158DRAFT_0669at 672.645 kb on - strand, within B158DRAFT_0669at 672.645 kb on - strand, within B158DRAFT_0669at 672.645 kb on - strand, within B158DRAFT_0669at 672.645 kb on - strand, within B158DRAFT_0669at 672.685 kb on + strand, within B158DRAFT_0669at 672.688 kb on - strand, within B158DRAFT_0669at 672.690 kb on + strand, within B158DRAFT_0669at 672.705 kb on + strand, within B158DRAFT_0669at 672.798 kb on + strandat 672.806 kb on - strandat 672.808 kb on - strandat 672.813 kb on - strandat 672.832 kb on + strandat 672.837 kb on + strandat 672.837 kb on + strandat 672.837 kb on + strandat 672.837 kb on + strandat 672.947 kb on + strandat 672.962 kb on + strandat 672.962 kb on + strandat 672.962 kb on + strandat 672.962 kb on + strandat 672.962 kb on + strandat 672.962 kb on + strandat 672.970 kb on - strandat 672.970 kb on - strandat 672.970 kb on - strandat 672.970 kb on - strandat 672.970 kb on - strandat 672.970 kb on - strandat 672.970 kb on - strandat 672.998 kb on - strand, within B158DRAFT_0670at 673.017 kb on + strand, within B158DRAFT_0670at 673.070 kb on + strand, within B158DRAFT_0670at 673.104 kb on + strand, within B158DRAFT_0670at 673.118 kb on + strand, within B158DRAFT_0670at 673.128 kb on + strand, within B158DRAFT_0670at 673.169 kb on + strand, within B158DRAFT_0670at 673.202 kb on - strand, within B158DRAFT_0670at 673.270 kb on - strand, within B158DRAFT_0670at 673.299 kb on - strand, within B158DRAFT_0670at 673.412 kb on - strand, within B158DRAFT_0670at 673.412 kb on - strand, within B158DRAFT_0670at 673.412 kb on - strand, within B158DRAFT_0670at 673.412 kb on - strand, within B158DRAFT_0670at 673.412 kb on - strand, within B158DRAFT_0670at 673.550 kb on + strand, within B158DRAFT_0670at 673.558 kb on - strand, within B158DRAFT_0670at 673.567 kb on + strand, within B158DRAFT_0670at 673.575 kb on - strand, within B158DRAFT_0670at 673.606 kb on + strand, within B158DRAFT_0670at 673.606 kb on + strand, within B158DRAFT_0670at 673.618 kb on + strand, within B158DRAFT_0670at 673.621 kb on - strand, within B158DRAFT_0670at 673.725 kb on + strand, within B158DRAFT_0670at 673.771 kb on - strand, within B158DRAFT_0670at 673.771 kb on - strand, within B158DRAFT_0670at 673.771 kb on - strand, within B158DRAFT_0670at 673.771 kb on - strand, within B158DRAFT_0670at 673.771 kb on - strand, within B158DRAFT_0670at 673.771 kb on - strand, within B158DRAFT_0670at 673.789 kb on - strand, within B158DRAFT_0670at 673.798 kb on + strand, within B158DRAFT_0670at 673.798 kb on + strand, within B158DRAFT_0670at 673.798 kb on + strand, within B158DRAFT_0670at 673.806 kb on - strand, within B158DRAFT_0670at 673.806 kb on - strand, within B158DRAFT_0670at 673.806 kb on - strand, within B158DRAFT_0670at 673.806 kb on - strand, within B158DRAFT_0670

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml
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671,261 + B158DRAFT_0667 0.71 +1.1
671,485 - +1.9
671,510 + +1.2
671,515 + -0.2
671,523 - +0.4
671,526 + -2.9
671,602 - B158DRAFT_0668 0.16 +1.6
671,651 + B158DRAFT_0668 0.22 +0.2
671,656 + B158DRAFT_0668 0.23 -0.2
671,688 - B158DRAFT_0668 0.27 +1.4
671,694 + B158DRAFT_0668 0.28 -2.3
671,704 + B158DRAFT_0668 0.29 -1.7
671,704 + B158DRAFT_0668 0.29 -0.6
671,712 - B158DRAFT_0668 0.30 +0.7
671,712 - B158DRAFT_0668 0.30 +2.8
671,712 - B158DRAFT_0668 0.30 +0.1
671,712 - B158DRAFT_0668 0.30 -0.6
671,713 - B158DRAFT_0668 0.30 -0.2
671,727 + B158DRAFT_0668 0.32 -0.0
671,764 + B158DRAFT_0668 0.37 -3.2
671,771 - B158DRAFT_0668 0.38 +1.2
671,772 + B158DRAFT_0668 0.38 +0.6
671,777 + B158DRAFT_0668 0.38 -1.3
671,802 - B158DRAFT_0668 0.42 -4.9
671,846 + B158DRAFT_0668 0.47 +1.6
671,913 + B158DRAFT_0668 0.56 -1.0
671,921 - B158DRAFT_0668 0.57 -0.8
671,921 - B158DRAFT_0668 0.57 +1.1
671,928 + B158DRAFT_0668 0.58 -4.9
671,928 - B158DRAFT_0668 0.58 +0.8
671,950 + B158DRAFT_0668 0.60 +0.5
672,057 - B158DRAFT_0668 0.74 +0.5
672,098 + B158DRAFT_0668 0.79 +1.1
672,100 - B158DRAFT_0668 0.80 -0.6
672,104 - B158DRAFT_0668 0.80 +0.5
672,141 + B158DRAFT_0668 0.85 +1.1
672,168 + B158DRAFT_0668 0.88 -0.0
672,235 + +0.0
672,312 - B158DRAFT_0669 0.12 +0.5
672,348 + B158DRAFT_0669 0.17 +2.6
672,368 - B158DRAFT_0669 0.21 -1.2
672,386 + B158DRAFT_0669 0.24 +0.6
672,409 - B158DRAFT_0669 0.27 -0.8
672,466 - B158DRAFT_0669 0.37 -0.1
672,478 + B158DRAFT_0669 0.39 -3.9
672,545 + B158DRAFT_0669 0.50 -0.1
672,545 + B158DRAFT_0669 0.50 +0.1
672,550 + B158DRAFT_0669 0.50 -1.6
672,550 + B158DRAFT_0669 0.50 -2.2
672,550 + B158DRAFT_0669 0.50 -1.2
672,550 + B158DRAFT_0669 0.50 +1.5
672,551 + B158DRAFT_0669 0.51 +0.7
672,553 - B158DRAFT_0669 0.51 +0.3
672,553 - B158DRAFT_0669 0.51 -1.6
672,553 - B158DRAFT_0669 0.51 +1.3
672,558 - B158DRAFT_0669 0.52 -0.4
672,558 - B158DRAFT_0669 0.52 +1.0
672,637 + B158DRAFT_0669 0.65 -0.7
672,637 + B158DRAFT_0669 0.65 -0.3
672,637 + B158DRAFT_0669 0.65 -1.2
672,637 + B158DRAFT_0669 0.65 +0.3
672,637 + B158DRAFT_0669 0.65 -0.3
672,637 + B158DRAFT_0669 0.65 -3.4
672,645 - B158DRAFT_0669 0.66 +1.0
672,645 - B158DRAFT_0669 0.66 -0.6
672,645 - B158DRAFT_0669 0.66 -0.9
672,645 - B158DRAFT_0669 0.66 -0.2
672,645 - B158DRAFT_0669 0.66 -3.4
672,645 - B158DRAFT_0669 0.66 +3.2
672,685 + B158DRAFT_0669 0.73 -2.1
672,688 - B158DRAFT_0669 0.73 -0.4
672,690 + B158DRAFT_0669 0.73 -3.4
672,705 + B158DRAFT_0669 0.76 +0.4
672,798 + +0.9
672,806 - +0.3
672,808 - +2.2
672,813 - -0.1
672,832 + -0.4
672,837 + -0.7
672,837 + -0.8
672,837 + -0.6
672,837 + -0.8
672,947 + -0.2
672,962 + +1.6
672,962 + -1.1
672,962 + +2.1
672,962 + +0.5
672,962 + +1.3
672,962 + -1.6
672,970 - -0.6
672,970 - -0.2
672,970 - -0.3
672,970 - +0.8
672,970 - +0.1
672,970 - +0.3
672,970 - -3.3
672,998 - B158DRAFT_0670 0.12 +0.5
673,017 + B158DRAFT_0670 0.14 -3.2
673,070 + B158DRAFT_0670 0.18 +0.1
673,104 + B158DRAFT_0670 0.21 -2.2
673,118 + B158DRAFT_0670 0.23 +1.0
673,128 + B158DRAFT_0670 0.24 -0.1
673,169 + B158DRAFT_0670 0.27 -0.4
673,202 - B158DRAFT_0670 0.30 -0.1
673,270 - B158DRAFT_0670 0.36 +1.5
673,299 - B158DRAFT_0670 0.39 -4.1
673,412 - B158DRAFT_0670 0.49 +1.2
673,412 - B158DRAFT_0670 0.49 +0.9
673,412 - B158DRAFT_0670 0.49 -0.4
673,412 - B158DRAFT_0670 0.49 +1.5
673,412 - B158DRAFT_0670 0.49 -2.9
673,550 + B158DRAFT_0670 0.62 +0.5
673,558 - B158DRAFT_0670 0.62 -0.1
673,567 + B158DRAFT_0670 0.63 -2.5
673,575 - B158DRAFT_0670 0.64 +1.7
673,606 + B158DRAFT_0670 0.67 +0.3
673,606 + B158DRAFT_0670 0.67 +0.5
673,618 + B158DRAFT_0670 0.68 -1.6
673,621 - B158DRAFT_0670 0.68 -0.1
673,725 + B158DRAFT_0670 0.77 +0.2
673,771 - B158DRAFT_0670 0.82 +1.2
673,771 - B158DRAFT_0670 0.82 -2.9
673,771 - B158DRAFT_0670 0.82 +0.9
673,771 - B158DRAFT_0670 0.82 +0.4
673,771 - B158DRAFT_0670 0.82 +0.2
673,771 - B158DRAFT_0670 0.82 +0.3
673,789 - B158DRAFT_0670 0.83 +1.0
673,798 + B158DRAFT_0670 0.84 +1.8
673,798 + B158DRAFT_0670 0.84 +0.3
673,798 + B158DRAFT_0670 0.84 -4.8
673,806 - B158DRAFT_0670 0.85 -0.2
673,806 - B158DRAFT_0670 0.85 -3.3
673,806 - B158DRAFT_0670 0.85 -3.0
673,806 - B158DRAFT_0670 0.85 -0.0

Or see this region's nucleotide sequence