Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0592

Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0591 and B158DRAFT_0592 are separated by 175 nucleotidesB158DRAFT_0592 and B158DRAFT_0593 are separated by 4 nucleotides B158DRAFT_0591: B158DRAFT_0591 - Uncharacterized conserved protein, at 595,656 to 597,449 _0591 B158DRAFT_0592: B158DRAFT_0592 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 597,625 to 598,653 _0592 B158DRAFT_0593: B158DRAFT_0593 - Malic enzyme, at 598,658 to 599,851 _0593 Position (kb) 597 598 599Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 596.625 kb on + strand, within B158DRAFT_0591at 596.625 kb on + strand, within B158DRAFT_0591at 596.633 kb on - strand, within B158DRAFT_0591at 596.649 kb on + strand, within B158DRAFT_0591at 596.649 kb on + strand, within B158DRAFT_0591at 596.649 kb on + strand, within B158DRAFT_0591at 596.649 kb on + strand, within B158DRAFT_0591at 596.657 kb on - strand, within B158DRAFT_0591at 596.657 kb on - strand, within B158DRAFT_0591at 596.677 kb on - strand, within B158DRAFT_0591at 596.696 kb on + strand, within B158DRAFT_0591at 596.696 kb on + strand, within B158DRAFT_0591at 596.780 kb on - strand, within B158DRAFT_0591at 596.785 kb on + strand, within B158DRAFT_0591at 596.785 kb on + strand, within B158DRAFT_0591at 596.785 kb on + strand, within B158DRAFT_0591at 596.785 kb on + strand, within B158DRAFT_0591at 596.785 kb on + strand, within B158DRAFT_0591at 596.793 kb on - strand, within B158DRAFT_0591at 596.793 kb on - strand, within B158DRAFT_0591at 596.802 kb on - strand, within B158DRAFT_0591at 596.864 kb on + strand, within B158DRAFT_0591at 596.864 kb on + strand, within B158DRAFT_0591at 596.864 kb on + strand, within B158DRAFT_0591at 596.872 kb on - strand, within B158DRAFT_0591at 596.872 kb on - strand, within B158DRAFT_0591at 596.872 kb on - strand, within B158DRAFT_0591at 596.872 kb on - strand, within B158DRAFT_0591at 596.872 kb on - strand, within B158DRAFT_0591at 596.872 kb on - strand, within B158DRAFT_0591at 596.872 kb on - strand, within B158DRAFT_0591at 596.930 kb on - strand, within B158DRAFT_0591at 596.952 kb on - strand, within B158DRAFT_0591at 596.957 kb on - strand, within B158DRAFT_0591at 596.989 kb on + strand, within B158DRAFT_0591at 597.006 kb on - strand, within B158DRAFT_0591at 597.013 kb on + strand, within B158DRAFT_0591at 597.021 kb on - strand, within B158DRAFT_0591at 597.021 kb on - strand, within B158DRAFT_0591at 597.034 kb on - strand, within B158DRAFT_0591at 597.035 kb on + strand, within B158DRAFT_0591at 597.095 kb on - strand, within B158DRAFT_0591at 597.097 kb on - strand, within B158DRAFT_0591at 597.100 kb on - strand, within B158DRAFT_0591at 597.112 kb on + strand, within B158DRAFT_0591at 597.112 kb on - strand, within B158DRAFT_0591at 597.145 kb on + strand, within B158DRAFT_0591at 597.158 kb on - strand, within B158DRAFT_0591at 597.334 kb on - strandat 597.402 kb on + strandat 597.407 kb on + strandat 597.410 kb on - strandat 597.452 kb on + strandat 597.587 kb on - strandat 597.611 kb on + strandat 597.611 kb on - strandat 597.619 kb on - strandat 597.619 kb on - strandat 597.658 kb on - strandat 597.711 kb on - strandat 597.715 kb on + strandat 597.723 kb on - strandat 597.723 kb on - strandat 597.882 kb on + strand, within B158DRAFT_0592at 597.900 kb on + strand, within B158DRAFT_0592at 597.903 kb on - strand, within B158DRAFT_0592at 597.915 kb on + strand, within B158DRAFT_0592at 597.920 kb on + strand, within B158DRAFT_0592at 597.920 kb on + strand, within B158DRAFT_0592at 597.923 kb on - strand, within B158DRAFT_0592at 597.945 kb on - strand, within B158DRAFT_0592at 597.952 kb on - strand, within B158DRAFT_0592at 598.021 kb on + strand, within B158DRAFT_0592at 598.082 kb on + strand, within B158DRAFT_0592at 598.129 kb on - strand, within B158DRAFT_0592at 598.144 kb on + strand, within B158DRAFT_0592at 598.172 kb on + strand, within B158DRAFT_0592at 598.172 kb on + strand, within B158DRAFT_0592at 598.180 kb on - strand, within B158DRAFT_0592at 598.180 kb on - strand, within B158DRAFT_0592at 598.180 kb on - strand, within B158DRAFT_0592at 598.180 kb on - strand, within B158DRAFT_0592at 598.180 kb on - strand, within B158DRAFT_0592at 598.180 kb on - strand, within B158DRAFT_0592at 598.182 kb on + strand, within B158DRAFT_0592at 598.182 kb on + strand, within B158DRAFT_0592at 598.182 kb on + strand, within B158DRAFT_0592at 598.182 kb on + strand, within B158DRAFT_0592at 598.182 kb on + strand, within B158DRAFT_0592at 598.182 kb on + strand, within B158DRAFT_0592at 598.185 kb on - strand, within B158DRAFT_0592at 598.190 kb on - strand, within B158DRAFT_0592at 598.190 kb on - strand, within B158DRAFT_0592at 598.190 kb on - strand, within B158DRAFT_0592at 598.312 kb on - strand, within B158DRAFT_0592at 598.366 kb on - strand, within B158DRAFT_0592at 598.537 kb on + strand, within B158DRAFT_0592at 598.585 kb on - strandat 598.613 kb on - strandat 598.725 kb on + strandat 598.751 kb on + strandat 598.751 kb on + strandat 598.759 kb on - strandat 598.790 kb on + strand, within B158DRAFT_0593at 598.790 kb on + strand, within B158DRAFT_0593at 598.838 kb on + strand, within B158DRAFT_0593at 598.846 kb on - strand, within B158DRAFT_0593at 598.851 kb on + strand, within B158DRAFT_0593at 598.891 kb on + strand, within B158DRAFT_0593at 598.921 kb on + strand, within B158DRAFT_0593at 598.951 kb on - strand, within B158DRAFT_0593at 599.054 kb on + strand, within B158DRAFT_0593at 599.062 kb on - strand, within B158DRAFT_0593at 599.114 kb on + strand, within B158DRAFT_0593at 599.123 kb on - strand, within B158DRAFT_0593at 599.123 kb on - strand, within B158DRAFT_0593at 599.192 kb on + strand, within B158DRAFT_0593at 599.192 kb on - strand, within B158DRAFT_0593at 599.192 kb on - strand, within B158DRAFT_0593at 599.317 kb on - strand, within B158DRAFT_0593at 599.336 kb on + strand, within B158DRAFT_0593at 599.336 kb on + strand, within B158DRAFT_0593at 599.344 kb on - strand, within B158DRAFT_0593at 599.344 kb on - strand, within B158DRAFT_0593at 599.369 kb on + strand, within B158DRAFT_0593at 599.438 kb on - strand, within B158DRAFT_0593at 599.464 kb on + strand, within B158DRAFT_0593at 599.521 kb on - strand, within B158DRAFT_0593at 599.623 kb on + strand, within B158DRAFT_0593at 599.623 kb on + strand, within B158DRAFT_0593at 599.623 kb on + strand, within B158DRAFT_0593at 599.623 kb on + strand, within B158DRAFT_0593at 599.623 kb on + strand, within B158DRAFT_0593

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml
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596,625 + B158DRAFT_0591 0.54 -0.5
596,625 + B158DRAFT_0591 0.54 -3.2
596,633 - B158DRAFT_0591 0.54 +2.4
596,649 + B158DRAFT_0591 0.55 -4.2
596,649 + B158DRAFT_0591 0.55 +0.0
596,649 + B158DRAFT_0591 0.55 -1.3
596,649 + B158DRAFT_0591 0.55 +0.3
596,657 - B158DRAFT_0591 0.56 -1.8
596,657 - B158DRAFT_0591 0.56 +0.4
596,677 - B158DRAFT_0591 0.57 +0.4
596,696 + B158DRAFT_0591 0.58 -0.3
596,696 + B158DRAFT_0591 0.58 +0.5
596,780 - B158DRAFT_0591 0.63 +0.9
596,785 + B158DRAFT_0591 0.63 -0.1
596,785 + B158DRAFT_0591 0.63 +0.4
596,785 + B158DRAFT_0591 0.63 -0.8
596,785 + B158DRAFT_0591 0.63 -0.2
596,785 + B158DRAFT_0591 0.63 +0.9
596,793 - B158DRAFT_0591 0.63 +0.3
596,793 - B158DRAFT_0591 0.63 +0.3
596,802 - B158DRAFT_0591 0.64 -3.6
596,864 + B158DRAFT_0591 0.67 -0.2
596,864 + B158DRAFT_0591 0.67 -0.7
596,864 + B158DRAFT_0591 0.67 +0.1
596,872 - B158DRAFT_0591 0.68 +0.5
596,872 - B158DRAFT_0591 0.68 +0.6
596,872 - B158DRAFT_0591 0.68 -3.4
596,872 - B158DRAFT_0591 0.68 +1.2
596,872 - B158DRAFT_0591 0.68 -0.2
596,872 - B158DRAFT_0591 0.68 +0.2
596,872 - B158DRAFT_0591 0.68 -0.9
596,930 - B158DRAFT_0591 0.71 -1.1
596,952 - B158DRAFT_0591 0.72 +2.7
596,957 - B158DRAFT_0591 0.73 +0.2
596,989 + B158DRAFT_0591 0.74 +1.3
597,006 - B158DRAFT_0591 0.75 -0.9
597,013 + B158DRAFT_0591 0.76 -4.5
597,021 - B158DRAFT_0591 0.76 -0.2
597,021 - B158DRAFT_0591 0.76 -5.5
597,034 - B158DRAFT_0591 0.77 -0.3
597,035 + B158DRAFT_0591 0.77 +0.3
597,095 - B158DRAFT_0591 0.80 -0.3
597,097 - B158DRAFT_0591 0.80 +0.4
597,100 - B158DRAFT_0591 0.80 +0.3
597,112 + B158DRAFT_0591 0.81 -3.8
597,112 - B158DRAFT_0591 0.81 +2.1
597,145 + B158DRAFT_0591 0.83 -0.8
597,158 - B158DRAFT_0591 0.84 -1.8
597,334 - -0.7
597,402 + -0.1
597,407 + -0.4
597,410 - -4.5
597,452 + -0.2
597,587 - +0.4
597,611 + +0.2
597,611 - -1.2
597,619 - -2.7
597,619 - +2.2
597,658 - -0.4
597,711 - -0.3
597,715 + +0.3
597,723 - +0.4
597,723 - -1.5
597,882 + B158DRAFT_0592 0.25 -0.0
597,900 + B158DRAFT_0592 0.27 -3.7
597,903 - B158DRAFT_0592 0.27 +0.1
597,915 + B158DRAFT_0592 0.28 -0.3
597,920 + B158DRAFT_0592 0.29 +0.6
597,920 + B158DRAFT_0592 0.29 +0.3
597,923 - B158DRAFT_0592 0.29 +0.1
597,945 - B158DRAFT_0592 0.31 +0.4
597,952 - B158DRAFT_0592 0.32 -2.0
598,021 + B158DRAFT_0592 0.38 +0.9
598,082 + B158DRAFT_0592 0.44 -0.1
598,129 - B158DRAFT_0592 0.49 +0.3
598,144 + B158DRAFT_0592 0.50 -0.0
598,172 + B158DRAFT_0592 0.53 -0.5
598,172 + B158DRAFT_0592 0.53 +1.1
598,180 - B158DRAFT_0592 0.54 -0.4
598,180 - B158DRAFT_0592 0.54 +0.1
598,180 - B158DRAFT_0592 0.54 -0.2
598,180 - B158DRAFT_0592 0.54 -4.2
598,180 - B158DRAFT_0592 0.54 +0.7
598,180 - B158DRAFT_0592 0.54 -0.7
598,182 + B158DRAFT_0592 0.54 -0.5
598,182 + B158DRAFT_0592 0.54 -0.1
598,182 + B158DRAFT_0592 0.54 -0.1
598,182 + B158DRAFT_0592 0.54 +1.2
598,182 + B158DRAFT_0592 0.54 +0.4
598,182 + B158DRAFT_0592 0.54 -0.5
598,185 - B158DRAFT_0592 0.54 +0.1
598,190 - B158DRAFT_0592 0.55 -0.5
598,190 - B158DRAFT_0592 0.55 -0.3
598,190 - B158DRAFT_0592 0.55 +1.0
598,312 - B158DRAFT_0592 0.67 -1.4
598,366 - B158DRAFT_0592 0.72 +0.8
598,537 + B158DRAFT_0592 0.89 +0.5
598,585 - -0.7
598,613 - -1.3
598,725 + +0.1
598,751 + -3.7
598,751 + -2.3
598,759 - -0.6
598,790 + B158DRAFT_0593 0.11 -1.2
598,790 + B158DRAFT_0593 0.11 -0.2
598,838 + B158DRAFT_0593 0.15 -0.5
598,846 - B158DRAFT_0593 0.16 +0.2
598,851 + B158DRAFT_0593 0.16 -0.0
598,891 + B158DRAFT_0593 0.20 -0.4
598,921 + B158DRAFT_0593 0.22 -0.2
598,951 - B158DRAFT_0593 0.25 -0.5
599,054 + B158DRAFT_0593 0.33 +0.1
599,062 - B158DRAFT_0593 0.34 +0.3
599,114 + B158DRAFT_0593 0.38 -4.0
599,123 - B158DRAFT_0593 0.39 -0.2
599,123 - B158DRAFT_0593 0.39 +0.3
599,192 + B158DRAFT_0593 0.45 +0.6
599,192 - B158DRAFT_0593 0.45 +0.6
599,192 - B158DRAFT_0593 0.45 -0.3
599,317 - B158DRAFT_0593 0.55 -4.5
599,336 + B158DRAFT_0593 0.57 -0.2
599,336 + B158DRAFT_0593 0.57 +0.6
599,344 - B158DRAFT_0593 0.57 -1.0
599,344 - B158DRAFT_0593 0.57 -4.3
599,369 + B158DRAFT_0593 0.60 +0.6
599,438 - B158DRAFT_0593 0.65 -1.8
599,464 + B158DRAFT_0593 0.68 +0.2
599,521 - B158DRAFT_0593 0.72 -0.5
599,623 + B158DRAFT_0593 0.81 -3.1
599,623 + B158DRAFT_0593 0.81 -1.7
599,623 + B158DRAFT_0593 0.81 +0.4
599,623 + B158DRAFT_0593 0.81 -0.2
599,623 + B158DRAFT_0593 0.81 -0.0

Or see this region's nucleotide sequence