Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0589 and B158DRAFT_0590 are separated by 58 nucleotides B158DRAFT_0590 and B158DRAFT_0591 are separated by 220 nucleotides
B158DRAFT_0589: B158DRAFT_0589 - hypothetical protein, at 593,659 to 594,528
_0589
B158DRAFT_0590: B158DRAFT_0590 - hypothetical protein, at 594,587 to 595,435
_0590
B158DRAFT_0591: B158DRAFT_0591 - Uncharacterized conserved protein, at 595,656 to 597,449
_0591
Position (kb) 594
595
596 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 593.606 kb on + strand at 593.624 kb on + strand at 593.625 kb on + strand at 593.625 kb on + strand at 593.632 kb on - strand at 593.632 kb on - strand at 593.632 kb on - strand at 593.633 kb on - strand at 593.633 kb on - strand at 593.675 kb on + strand at 593.675 kb on + strand at 593.675 kb on + strand at 593.680 kb on + strand at 593.680 kb on + strand at 593.683 kb on - strand at 593.683 kb on - strand at 593.688 kb on - strand at 593.726 kb on + strand at 593.777 kb on + strand, within B158DRAFT_0589 at 593.807 kb on + strand, within B158DRAFT_0589 at 593.830 kb on - strand, within B158DRAFT_0589 at 593.880 kb on + strand, within B158DRAFT_0589 at 593.910 kb on + strand, within B158DRAFT_0589 at 593.940 kb on - strand, within B158DRAFT_0589 at 593.981 kb on - strand, within B158DRAFT_0589 at 593.981 kb on - strand, within B158DRAFT_0589 at 593.981 kb on - strand, within B158DRAFT_0589 at 593.981 kb on - strand, within B158DRAFT_0589 at 593.981 kb on - strand, within B158DRAFT_0589 at 594.027 kb on + strand, within B158DRAFT_0589 at 594.027 kb on + strand, within B158DRAFT_0589 at 594.035 kb on - strand, within B158DRAFT_0589 at 594.035 kb on - strand, within B158DRAFT_0589 at 594.035 kb on - strand, within B158DRAFT_0589 at 594.086 kb on + strand, within B158DRAFT_0589 at 594.094 kb on - strand, within B158DRAFT_0589 at 594.191 kb on + strand, within B158DRAFT_0589 at 594.229 kb on + strand, within B158DRAFT_0589 at 594.229 kb on + strand, within B158DRAFT_0589 at 594.237 kb on - strand, within B158DRAFT_0589 at 594.237 kb on - strand, within B158DRAFT_0589 at 594.237 kb on - strand, within B158DRAFT_0589 at 594.258 kb on + strand, within B158DRAFT_0589 at 594.266 kb on + strand, within B158DRAFT_0589 at 594.266 kb on + strand, within B158DRAFT_0589 at 594.266 kb on + strand, within B158DRAFT_0589 at 594.266 kb on + strand, within B158DRAFT_0589 at 594.268 kb on - strand, within B158DRAFT_0589 at 594.273 kb on - strand, within B158DRAFT_0589 at 594.274 kb on - strand, within B158DRAFT_0589 at 594.274 kb on - strand, within B158DRAFT_0589 at 594.274 kb on - strand, within B158DRAFT_0589 at 594.276 kb on - strand, within B158DRAFT_0589 at 594.333 kb on - strand, within B158DRAFT_0589 at 594.351 kb on + strand, within B158DRAFT_0589 at 594.352 kb on - strand, within B158DRAFT_0589 at 594.352 kb on - strand, within B158DRAFT_0589 at 594.359 kb on - strand, within B158DRAFT_0589 at 594.381 kb on + strand, within B158DRAFT_0589 at 594.396 kb on + strand, within B158DRAFT_0589 at 594.411 kb on - strand, within B158DRAFT_0589 at 594.481 kb on - strand at 594.485 kb on + strand at 594.522 kb on + strand at 594.530 kb on - strand at 594.612 kb on + strand at 594.612 kb on + strand at 594.612 kb on + strand at 594.612 kb on + strand at 594.620 kb on - strand at 594.620 kb on - strand at 594.620 kb on - strand at 594.620 kb on - strand at 594.620 kb on - strand at 594.620 kb on - strand at 594.620 kb on - strand at 594.620 kb on - strand at 594.622 kb on + strand at 594.646 kb on - strand at 594.780 kb on - strand, within B158DRAFT_0590 at 594.842 kb on + strand, within B158DRAFT_0590 at 594.844 kb on + strand, within B158DRAFT_0590 at 594.860 kb on - strand, within B158DRAFT_0590 at 594.879 kb on - strand, within B158DRAFT_0590 at 594.887 kb on - strand, within B158DRAFT_0590 at 594.887 kb on - strand, within B158DRAFT_0590 at 594.889 kb on - strand, within B158DRAFT_0590 at 595.086 kb on + strand, within B158DRAFT_0590 at 595.163 kb on - strand, within B158DRAFT_0590 at 595.185 kb on - strand, within B158DRAFT_0590 at 595.219 kb on + strand, within B158DRAFT_0590 at 595.233 kb on - strand, within B158DRAFT_0590 at 595.249 kb on - strand, within B158DRAFT_0590 at 595.328 kb on + strand, within B158DRAFT_0590 at 595.345 kb on - strand, within B158DRAFT_0590 at 595.447 kb on + strand at 595.504 kb on - strand at 595.504 kb on - strand at 595.504 kb on - strand at 595.511 kb on - strand at 595.516 kb on + strand at 595.516 kb on + strand at 595.555 kb on + strand at 595.568 kb on + strand at 595.575 kb on + strand at 595.575 kb on + strand at 595.584 kb on - strand at 595.626 kb on + strand at 595.631 kb on + strand at 595.639 kb on - strand at 595.641 kb on + strand at 595.649 kb on - strand at 595.649 kb on - strand at 595.676 kb on + strand at 595.691 kb on + strand at 595.691 kb on + strand at 595.691 kb on + strand at 595.691 kb on + strand at 595.691 kb on + strand at 595.691 kb on + strand at 595.691 kb on + strand at 595.691 kb on + strand at 595.691 kb on + strand at 595.691 kb on + strand at 595.699 kb on - strand at 595.699 kb on - strand at 595.699 kb on - strand at 595.699 kb on - strand at 595.699 kb on - strand at 595.699 kb on - strand at 595.699 kb on - strand at 595.756 kb on + strand at 595.764 kb on - strand at 595.775 kb on + strand at 595.863 kb on + strand, within B158DRAFT_0591 at 595.954 kb on + strand, within B158DRAFT_0591 at 595.956 kb on + strand, within B158DRAFT_0591 at 596.052 kb on - strand, within B158DRAFT_0591 at 596.128 kb on + strand, within B158DRAFT_0591 at 596.138 kb on + strand, within B158DRAFT_0591 at 596.146 kb on - strand, within B158DRAFT_0591 at 596.146 kb on - strand, within B158DRAFT_0591 at 596.147 kb on - strand, within B158DRAFT_0591 at 596.195 kb on + strand, within B158DRAFT_0591 at 596.203 kb on - strand, within B158DRAFT_0591 at 596.203 kb on - strand, within B158DRAFT_0591 at 596.240 kb on + strand, within B158DRAFT_0591 at 596.240 kb on + strand, within B158DRAFT_0591 at 596.265 kb on + strand, within B158DRAFT_0591 at 596.308 kb on + strand, within B158DRAFT_0591 at 596.309 kb on + strand, within B158DRAFT_0591 at 596.316 kb on - strand, within B158DRAFT_0591 at 596.316 kb on - strand, within B158DRAFT_0591 at 596.318 kb on + strand, within B158DRAFT_0591 at 596.318 kb on + strand, within B158DRAFT_0591 at 596.326 kb on - strand, within B158DRAFT_0591 at 596.326 kb on - strand, within B158DRAFT_0591 at 596.326 kb on - strand, within B158DRAFT_0591 at 596.326 kb on - strand, within B158DRAFT_0591 at 596.328 kb on - strand, within B158DRAFT_0591 at 596.387 kb on + strand, within B158DRAFT_0591 at 596.387 kb on + strand, within B158DRAFT_0591 at 596.388 kb on + strand, within B158DRAFT_0591 at 596.405 kb on + strand, within B158DRAFT_0591 at 596.405 kb on + strand, within B158DRAFT_0591 at 596.405 kb on + strand, within B158DRAFT_0591 at 596.405 kb on + strand, within B158DRAFT_0591 at 596.405 kb on + strand, within B158DRAFT_0591 at 596.413 kb on - strand, within B158DRAFT_0591 at 596.418 kb on - strand, within B158DRAFT_0591
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 593,606 + -0.7 593,624 + +0.7 593,625 + -0.1 593,625 + +0.8 593,632 - +0.9 593,632 - +0.1 593,632 - +0.6 593,633 - +0.5 593,633 - -0.9 593,675 + +0.1 593,675 + +0.6 593,675 + +0.2 593,680 + -1.6 593,680 + -0.2 593,683 - -0.3 593,683 - +0.4 593,688 - -0.5 593,726 + +0.4 593,777 + B158DRAFT_0589 0.14 -1.0 593,807 + B158DRAFT_0589 0.17 +1.7 593,830 - B158DRAFT_0589 0.20 -1.1 593,880 + B158DRAFT_0589 0.25 +1.3 593,910 + B158DRAFT_0589 0.29 +0.2 593,940 - B158DRAFT_0589 0.32 -1.4 593,981 - B158DRAFT_0589 0.37 -1.6 593,981 - B158DRAFT_0589 0.37 -4.3 593,981 - B158DRAFT_0589 0.37 -1.0 593,981 - B158DRAFT_0589 0.37 +0.9 593,981 - B158DRAFT_0589 0.37 -0.4 594,027 + B158DRAFT_0589 0.42 -4.2 594,027 + B158DRAFT_0589 0.42 -0.3 594,035 - B158DRAFT_0589 0.43 -1.0 594,035 - B158DRAFT_0589 0.43 -1.6 594,035 - B158DRAFT_0589 0.43 -1.0 594,086 + B158DRAFT_0589 0.49 +0.0 594,094 - B158DRAFT_0589 0.50 -0.6 594,191 + B158DRAFT_0589 0.61 +0.1 594,229 + B158DRAFT_0589 0.66 -1.4 594,229 + B158DRAFT_0589 0.66 -5.3 594,237 - B158DRAFT_0589 0.66 -0.3 594,237 - B158DRAFT_0589 0.66 -0.4 594,237 - B158DRAFT_0589 0.66 +0.0 594,258 + B158DRAFT_0589 0.69 -0.9 594,266 + B158DRAFT_0589 0.70 +0.5 594,266 + B158DRAFT_0589 0.70 -0.1 594,266 + B158DRAFT_0589 0.70 +0.7 594,266 + B158DRAFT_0589 0.70 +0.5 594,268 - B158DRAFT_0589 0.70 +0.1 594,273 - B158DRAFT_0589 0.71 -4.3 594,274 - B158DRAFT_0589 0.71 +0.5 594,274 - B158DRAFT_0589 0.71 +0.1 594,274 - B158DRAFT_0589 0.71 +0.0 594,276 - B158DRAFT_0589 0.71 +0.6 594,333 - B158DRAFT_0589 0.77 -1.0 594,351 + B158DRAFT_0589 0.80 +0.6 594,352 - B158DRAFT_0589 0.80 +0.3 594,352 - B158DRAFT_0589 0.80 -4.2 594,359 - B158DRAFT_0589 0.80 -2.4 594,381 + B158DRAFT_0589 0.83 -1.3 594,396 + B158DRAFT_0589 0.85 +0.5 594,411 - B158DRAFT_0589 0.86 +0.0 594,481 - -0.4 594,485 + -0.1 594,522 + +0.1 594,530 - +0.3 594,612 + -4.2 594,612 + -0.2 594,612 + +0.5 594,612 + -0.4 594,620 - +0.6 594,620 - -0.9 594,620 - -0.7 594,620 - -3.0 594,620 - -3.2 594,620 - +0.1 594,620 - +0.1 594,620 - +0.0 594,622 + -0.2 594,646 - +0.4 594,780 - B158DRAFT_0590 0.23 -0.1 594,842 + B158DRAFT_0590 0.30 +0.6 594,844 + B158DRAFT_0590 0.30 -0.7 594,860 - B158DRAFT_0590 0.32 -0.0 594,879 - B158DRAFT_0590 0.34 +0.4 594,887 - B158DRAFT_0590 0.35 +0.7 594,887 - B158DRAFT_0590 0.35 +0.6 594,889 - B158DRAFT_0590 0.36 +0.3 595,086 + B158DRAFT_0590 0.59 -0.0 595,163 - B158DRAFT_0590 0.68 -0.1 595,185 - B158DRAFT_0590 0.70 -1.7 595,219 + B158DRAFT_0590 0.74 +0.1 595,233 - B158DRAFT_0590 0.76 -5.7 595,249 - B158DRAFT_0590 0.78 +0.3 595,328 + B158DRAFT_0590 0.87 +0.0 595,345 - B158DRAFT_0590 0.89 -0.4 595,447 + -3.6 595,504 - -0.6 595,504 - +1.1 595,504 - +0.3 595,511 - -0.1 595,516 + +0.9 595,516 + -0.9 595,555 + -1.1 595,568 + -0.1 595,575 + -0.3 595,575 + -0.2 595,584 - +0.8 595,626 + +0.5 595,631 + -0.2 595,639 - -0.1 595,641 + +0.3 595,649 - +0.3 595,649 - -0.0 595,676 + +2.1 595,691 + +1.2 595,691 + -0.6 595,691 + -2.7 595,691 + -0.0 595,691 + +0.3 595,691 + -4.9 595,691 + +2.2 595,691 + +0.1 595,691 + +0.7 595,691 + +0.3 595,699 - +0.8 595,699 - +1.8 595,699 - -1.5 595,699 - +0.8 595,699 - +0.6 595,699 - +0.5 595,699 - -0.1 595,756 + +0.0 595,764 - +0.3 595,775 + +0.2 595,863 + B158DRAFT_0591 0.12 -0.6 595,954 + B158DRAFT_0591 0.17 +0.3 595,956 + B158DRAFT_0591 0.17 +1.1 596,052 - B158DRAFT_0591 0.22 -1.2 596,128 + B158DRAFT_0591 0.26 -0.4 596,138 + B158DRAFT_0591 0.27 -0.1 596,146 - B158DRAFT_0591 0.27 -3.3 596,146 - B158DRAFT_0591 0.27 +0.4 596,147 - B158DRAFT_0591 0.27 -1.0 596,195 + B158DRAFT_0591 0.30 -1.2 596,203 - B158DRAFT_0591 0.30 +0.1 596,203 - B158DRAFT_0591 0.30 -4.0 596,240 + B158DRAFT_0591 0.33 -0.6 596,240 + B158DRAFT_0591 0.33 +0.2 596,265 + B158DRAFT_0591 0.34 -0.6 596,308 + B158DRAFT_0591 0.36 +1.2 596,309 + B158DRAFT_0591 0.36 -0.0 596,316 - B158DRAFT_0591 0.37 -0.1 596,316 - B158DRAFT_0591 0.37 +1.2 596,318 + B158DRAFT_0591 0.37 -0.1 596,318 + B158DRAFT_0591 0.37 -0.9 596,326 - B158DRAFT_0591 0.37 -0.7 596,326 - B158DRAFT_0591 0.37 -0.9 596,326 - B158DRAFT_0591 0.37 -4.2 596,326 - B158DRAFT_0591 0.37 -0.1 596,328 - B158DRAFT_0591 0.37 +0.6 596,387 + B158DRAFT_0591 0.41 -0.2 596,387 + B158DRAFT_0591 0.41 -4.3 596,388 + B158DRAFT_0591 0.41 -5.4 596,405 + B158DRAFT_0591 0.42 +0.2 596,405 + B158DRAFT_0591 0.42 +0.7 596,405 + B158DRAFT_0591 0.42 -0.3 596,405 + B158DRAFT_0591 0.42 -0.3 596,405 + B158DRAFT_0591 0.42 +0.6 596,413 - B158DRAFT_0591 0.42 +0.3 596,418 - B158DRAFT_0591 0.42 -3.4
Or see this region's nucleotide sequence