Experiment: m.b. Polymyxin B sulfate 0.0019531 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0541 and B158DRAFT_0542 are separated by 90 nucleotides B158DRAFT_0542 and B158DRAFT_0543 are separated by 103 nucleotides
B158DRAFT_0541: B158DRAFT_0541 - ABC-type Fe3+ transport system, permease component, at 546,426 to 548,072
_0541
B158DRAFT_0542: B158DRAFT_0542 - N-acetylglutamate synthase and related acetyltransferases, at 548,163 to 548,624
_0542
B158DRAFT_0543: B158DRAFT_0543 - glycine cleavage system T protein, at 548,728 to 549,816
_0543
Position (kb) 548
549 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 548.200 kb on - strand at 548.279 kb on + strand, within B158DRAFT_0542 at 548.287 kb on + strand, within B158DRAFT_0542 at 548.295 kb on - strand, within B158DRAFT_0542 at 548.323 kb on + strand, within B158DRAFT_0542 at 548.323 kb on + strand, within B158DRAFT_0542 at 548.331 kb on - strand, within B158DRAFT_0542 at 548.386 kb on + strand, within B158DRAFT_0542 at 548.399 kb on - strand, within B158DRAFT_0542 at 548.399 kb on - strand, within B158DRAFT_0542 at 548.435 kb on + strand, within B158DRAFT_0542 at 548.435 kb on + strand, within B158DRAFT_0542 at 548.461 kb on - strand, within B158DRAFT_0542 at 548.467 kb on + strand, within B158DRAFT_0542 at 548.508 kb on - strand, within B158DRAFT_0542 at 548.526 kb on + strand, within B158DRAFT_0542 at 548.534 kb on + strand, within B158DRAFT_0542 at 548.534 kb on - strand, within B158DRAFT_0542 at 548.536 kb on + strand, within B158DRAFT_0542 at 548.544 kb on - strand, within B158DRAFT_0542 at 548.584 kb on + strand at 548.584 kb on + strand at 548.592 kb on - strand at 548.598 kb on + strand at 548.609 kb on + strand at 548.686 kb on + strand at 549.088 kb on + strand, within B158DRAFT_0543
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0019531 mg/ml remove 548,200 - -0.7 548,279 + B158DRAFT_0542 0.25 -1.0 548,287 + B158DRAFT_0542 0.27 -0.3 548,295 - B158DRAFT_0542 0.29 -0.7 548,323 + B158DRAFT_0542 0.35 +0.1 548,323 + B158DRAFT_0542 0.35 -0.3 548,331 - B158DRAFT_0542 0.36 +0.4 548,386 + B158DRAFT_0542 0.48 +0.4 548,399 - B158DRAFT_0542 0.51 -0.3 548,399 - B158DRAFT_0542 0.51 +2.2 548,435 + B158DRAFT_0542 0.59 -0.4 548,435 + B158DRAFT_0542 0.59 +0.1 548,461 - B158DRAFT_0542 0.65 +1.7 548,467 + B158DRAFT_0542 0.66 +0.2 548,508 - B158DRAFT_0542 0.75 -0.2 548,526 + B158DRAFT_0542 0.79 +0.2 548,534 + B158DRAFT_0542 0.80 +0.9 548,534 - B158DRAFT_0542 0.80 -2.7 548,536 + B158DRAFT_0542 0.81 +0.1 548,544 - B158DRAFT_0542 0.82 +0.1 548,584 + -0.2 548,584 + -0.0 548,592 - -0.9 548,598 + -0.1 548,609 + -4.4 548,686 + -0.9 549,088 + B158DRAFT_0543 0.33 +2.5
Or see this region's nucleotide sequence