Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2372 and B158DRAFT_2373 are separated by 304 nucleotides B158DRAFT_2373 and B158DRAFT_2374 overlap by 31 nucleotides B158DRAFT_2374 and B158DRAFT_2375 are separated by 5 nucleotides
B158DRAFT_2372: B158DRAFT_2372 - Transposase and inactivated derivatives, at 543,249 to 543,785
_2372
B158DRAFT_2373: B158DRAFT_2373 - Putative lipid carrier protein, at 544,090 to 544,662
_2373
B158DRAFT_2374: B158DRAFT_2374 - Collagenase and related proteases, at 544,632 to 545,513
_2374
B158DRAFT_2375: B158DRAFT_2375 - Collagenase and related proteases, at 545,519 to 546,508
_2375
Position (kb) 544
545 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 543.095 kb on + strand at 543.103 kb on - strand at 543.103 kb on - strand at 543.134 kb on + strand at 543.144 kb on + strand at 543.152 kb on - strand at 543.166 kb on + strand at 543.169 kb on - strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.265 kb on + strand at 543.265 kb on + strand at 543.266 kb on + strand at 543.266 kb on + strand at 543.266 kb on + strand at 543.266 kb on + strand at 543.266 kb on + strand at 543.274 kb on - strand at 543.274 kb on - strand at 543.274 kb on - strand at 543.274 kb on - strand at 543.274 kb on - strand at 543.274 kb on - strand at 543.321 kb on + strand, within B158DRAFT_2372 at 543.413 kb on + strand, within B158DRAFT_2372 at 543.421 kb on - strand, within B158DRAFT_2372 at 543.501 kb on - strand, within B158DRAFT_2372 at 543.501 kb on - strand, within B158DRAFT_2372 at 543.503 kb on + strand, within B158DRAFT_2372 at 543.503 kb on + strand, within B158DRAFT_2372 at 543.503 kb on + strand, within B158DRAFT_2372 at 543.503 kb on + strand, within B158DRAFT_2372 at 543.506 kb on - strand, within B158DRAFT_2372 at 543.506 kb on - strand, within B158DRAFT_2372 at 543.510 kb on + strand, within B158DRAFT_2372 at 543.511 kb on - strand, within B158DRAFT_2372 at 543.536 kb on + strand, within B158DRAFT_2372 at 543.536 kb on + strand, within B158DRAFT_2372 at 543.644 kb on + strand, within B158DRAFT_2372 at 543.644 kb on + strand, within B158DRAFT_2372 at 543.652 kb on - strand, within B158DRAFT_2372 at 543.659 kb on - strand, within B158DRAFT_2372 at 543.662 kb on - strand, within B158DRAFT_2372 at 543.665 kb on + strand, within B158DRAFT_2372 at 543.665 kb on + strand, within B158DRAFT_2372 at 543.673 kb on - strand, within B158DRAFT_2372 at 543.723 kb on + strand, within B158DRAFT_2372 at 543.730 kb on + strand, within B158DRAFT_2372 at 543.736 kb on - strand at 543.745 kb on - strand at 543.747 kb on + strand at 543.755 kb on - strand at 543.895 kb on - strand at 543.976 kb on - strand at 544.027 kb on - strand at 544.052 kb on + strand at 544.105 kb on - strand at 544.122 kb on - strand at 544.177 kb on - strand, within B158DRAFT_2373 at 544.203 kb on - strand, within B158DRAFT_2373 at 544.216 kb on - strand, within B158DRAFT_2373 at 544.261 kb on - strand, within B158DRAFT_2373 at 544.261 kb on - strand, within B158DRAFT_2373 at 544.273 kb on + strand, within B158DRAFT_2373 at 544.273 kb on + strand, within B158DRAFT_2373 at 544.273 kb on + strand, within B158DRAFT_2373 at 544.273 kb on + strand, within B158DRAFT_2373 at 544.273 kb on + strand, within B158DRAFT_2373 at 544.273 kb on + strand, within B158DRAFT_2373 at 544.281 kb on - strand, within B158DRAFT_2373 at 544.281 kb on - strand, within B158DRAFT_2373 at 544.281 kb on - strand, within B158DRAFT_2373 at 544.281 kb on - strand, within B158DRAFT_2373 at 544.281 kb on - strand, within B158DRAFT_2373 at 544.281 kb on - strand, within B158DRAFT_2373 at 544.281 kb on - strand, within B158DRAFT_2373 at 544.281 kb on - strand, within B158DRAFT_2373 at 544.281 kb on - strand, within B158DRAFT_2373 at 544.336 kb on + strand, within B158DRAFT_2373 at 544.355 kb on + strand, within B158DRAFT_2373 at 544.530 kb on - strand, within B158DRAFT_2373 at 544.658 kb on + strand at 544.665 kb on + strand at 544.690 kb on - strand at 544.704 kb on + strand at 544.731 kb on + strand, within B158DRAFT_2374 at 544.731 kb on + strand, within B158DRAFT_2374 at 544.744 kb on - strand, within B158DRAFT_2374 at 544.870 kb on + strand, within B158DRAFT_2374 at 544.870 kb on + strand, within B158DRAFT_2374 at 544.870 kb on + strand, within B158DRAFT_2374 at 544.878 kb on - strand, within B158DRAFT_2374 at 544.878 kb on - strand, within B158DRAFT_2374 at 544.878 kb on - strand, within B158DRAFT_2374 at 544.878 kb on - strand, within B158DRAFT_2374 at 544.883 kb on - strand, within B158DRAFT_2374 at 544.895 kb on - strand, within B158DRAFT_2374 at 544.895 kb on - strand, within B158DRAFT_2374 at 544.895 kb on - strand, within B158DRAFT_2374 at 544.962 kb on - strand, within B158DRAFT_2374 at 544.987 kb on - strand, within B158DRAFT_2374 at 544.987 kb on - strand, within B158DRAFT_2374 at 544.996 kb on + strand, within B158DRAFT_2374 at 544.996 kb on + strand, within B158DRAFT_2374 at 544.996 kb on + strand, within B158DRAFT_2374 at 544.996 kb on + strand, within B158DRAFT_2374 at 544.996 kb on + strand, within B158DRAFT_2374 at 545.004 kb on - strand, within B158DRAFT_2374 at 545.004 kb on - strand, within B158DRAFT_2374 at 545.004 kb on - strand, within B158DRAFT_2374 at 545.004 kb on - strand, within B158DRAFT_2374 at 545.009 kb on - strand, within B158DRAFT_2374 at 545.209 kb on + strand, within B158DRAFT_2374 at 545.282 kb on + strand, within B158DRAFT_2374 at 545.293 kb on + strand, within B158DRAFT_2374 at 545.304 kb on + strand, within B158DRAFT_2374 at 545.304 kb on + strand, within B158DRAFT_2374 at 545.362 kb on + strand, within B158DRAFT_2374 at 545.398 kb on - strand, within B158DRAFT_2374 at 545.398 kb on - strand, within B158DRAFT_2374 at 545.422 kb on - strand, within B158DRAFT_2374 at 545.466 kb on + strand at 545.474 kb on - strand at 545.661 kb on + strand, within B158DRAFT_2375
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml remove 543,095 + +0.2 543,103 - -0.8 543,103 - -1.2 543,134 + -0.2 543,144 + -0.2 543,152 - +0.3 543,166 + +0.7 543,169 - -0.0 543,171 + -0.5 543,171 + -0.7 543,171 + +0.2 543,171 + +0.3 543,171 + -1.5 543,171 + -5.1 543,171 + -0.9 543,171 + -2.2 543,171 + -0.0 543,171 + -0.3 543,171 + -0.1 543,171 + +0.8 543,171 + +0.4 543,171 + -0.4 543,171 + -1.3 543,171 + +0.0 543,171 + +0.1 543,171 + -0.4 543,171 + -0.2 543,171 + -0.1 543,171 + -0.3 543,171 + +0.6 543,171 + +0.8 543,171 + -0.8 543,171 + -4.1 543,171 + -1.3 543,171 + -0.1 543,179 - -0.1 543,179 - -1.0 543,179 - +1.4 543,179 - -0.1 543,179 - -2.3 543,179 - +0.0 543,179 - -1.8 543,179 - -0.4 543,179 - -0.1 543,179 - -0.5 543,179 - -0.2 543,179 - -0.6 543,179 - -0.5 543,179 - +0.2 543,179 - +0.6 543,179 - +0.5 543,179 - -0.3 543,179 - -0.7 543,179 - -0.7 543,179 - -0.7 543,179 - +0.8 543,179 - -0.7 543,179 - -0.5 543,265 + -0.1 543,265 + -0.8 543,266 + -1.0 543,266 + +1.5 543,266 + +0.5 543,266 + +0.1 543,266 + +1.5 543,274 - +0.3 543,274 - -3.5 543,274 - +0.7 543,274 - -0.3 543,274 - -0.7 543,274 - +0.3 543,321 + B158DRAFT_2372 0.13 -0.4 543,413 + B158DRAFT_2372 0.31 -0.2 543,421 - B158DRAFT_2372 0.32 -4.1 543,501 - B158DRAFT_2372 0.47 -0.2 543,501 - B158DRAFT_2372 0.47 -2.0 543,503 + B158DRAFT_2372 0.47 +0.5 543,503 + B158DRAFT_2372 0.47 +1.8 543,503 + B158DRAFT_2372 0.47 +0.0 543,503 + B158DRAFT_2372 0.47 -2.5 543,506 - B158DRAFT_2372 0.48 -1.5 543,506 - B158DRAFT_2372 0.48 -1.5 543,510 + B158DRAFT_2372 0.49 +0.8 543,511 - B158DRAFT_2372 0.49 -5.6 543,536 + B158DRAFT_2372 0.53 -0.9 543,536 + B158DRAFT_2372 0.53 +0.1 543,644 + B158DRAFT_2372 0.74 -1.0 543,644 + B158DRAFT_2372 0.74 +0.2 543,652 - B158DRAFT_2372 0.75 -1.0 543,659 - B158DRAFT_2372 0.76 -2.8 543,662 - B158DRAFT_2372 0.77 +1.2 543,665 + B158DRAFT_2372 0.77 +0.5 543,665 + B158DRAFT_2372 0.77 +0.2 543,673 - B158DRAFT_2372 0.79 +1.6 543,723 + B158DRAFT_2372 0.88 -1.1 543,730 + B158DRAFT_2372 0.90 -0.0 543,736 - -0.1 543,745 - -0.3 543,747 + +2.2 543,755 - +0.7 543,895 - -0.2 543,976 - -0.3 544,027 - -0.7 544,052 + -0.8 544,105 - -0.8 544,122 - -0.9 544,177 - B158DRAFT_2373 0.15 -1.4 544,203 - B158DRAFT_2373 0.20 -0.5 544,216 - B158DRAFT_2373 0.22 -1.0 544,261 - B158DRAFT_2373 0.30 +0.1 544,261 - B158DRAFT_2373 0.30 +0.4 544,273 + B158DRAFT_2373 0.32 -3.1 544,273 + B158DRAFT_2373 0.32 -0.5 544,273 + B158DRAFT_2373 0.32 +1.1 544,273 + B158DRAFT_2373 0.32 +0.0 544,273 + B158DRAFT_2373 0.32 -0.3 544,273 + B158DRAFT_2373 0.32 -0.1 544,281 - B158DRAFT_2373 0.33 -0.9 544,281 - B158DRAFT_2373 0.33 +0.0 544,281 - B158DRAFT_2373 0.33 -1.5 544,281 - B158DRAFT_2373 0.33 -0.2 544,281 - B158DRAFT_2373 0.33 -0.1 544,281 - B158DRAFT_2373 0.33 +0.3 544,281 - B158DRAFT_2373 0.33 -3.0 544,281 - B158DRAFT_2373 0.33 +0.3 544,281 - B158DRAFT_2373 0.33 -0.3 544,336 + B158DRAFT_2373 0.43 +0.3 544,355 + B158DRAFT_2373 0.46 +0.6 544,530 - B158DRAFT_2373 0.77 -0.5 544,658 + +0.5 544,665 + -0.3 544,690 - -0.1 544,704 + -0.0 544,731 + B158DRAFT_2374 0.11 -0.2 544,731 + B158DRAFT_2374 0.11 +0.9 544,744 - B158DRAFT_2374 0.13 -1.0 544,870 + B158DRAFT_2374 0.27 -0.4 544,870 + B158DRAFT_2374 0.27 -0.3 544,870 + B158DRAFT_2374 0.27 -4.1 544,878 - B158DRAFT_2374 0.28 +0.1 544,878 - B158DRAFT_2374 0.28 +0.2 544,878 - B158DRAFT_2374 0.28 -0.3 544,878 - B158DRAFT_2374 0.28 +0.0 544,883 - B158DRAFT_2374 0.28 -0.4 544,895 - B158DRAFT_2374 0.30 -4.0 544,895 - B158DRAFT_2374 0.30 -0.9 544,895 - B158DRAFT_2374 0.30 -0.6 544,962 - B158DRAFT_2374 0.37 -0.2 544,987 - B158DRAFT_2374 0.40 -0.4 544,987 - B158DRAFT_2374 0.40 +0.0 544,996 + B158DRAFT_2374 0.41 -1.3 544,996 + B158DRAFT_2374 0.41 -0.1 544,996 + B158DRAFT_2374 0.41 -0.4 544,996 + B158DRAFT_2374 0.41 +0.6 544,996 + B158DRAFT_2374 0.41 -0.1 545,004 - B158DRAFT_2374 0.42 -0.4 545,004 - B158DRAFT_2374 0.42 -1.2 545,004 - B158DRAFT_2374 0.42 -0.8 545,004 - B158DRAFT_2374 0.42 +0.2 545,009 - B158DRAFT_2374 0.43 +0.3 545,209 + B158DRAFT_2374 0.65 -1.9 545,282 + B158DRAFT_2374 0.74 -0.5 545,293 + B158DRAFT_2374 0.75 -0.0 545,304 + B158DRAFT_2374 0.76 -0.2 545,304 + B158DRAFT_2374 0.76 -1.1 545,362 + B158DRAFT_2374 0.83 +0.2 545,398 - B158DRAFT_2374 0.87 +0.2 545,398 - B158DRAFT_2374 0.87 +0.3 545,422 - B158DRAFT_2374 0.90 -1.4 545,466 + -0.7 545,474 - -0.5 545,661 + B158DRAFT_2375 0.14 +0.7
Or see this region's nucleotide sequence