Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2288

Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2287 and B158DRAFT_2288 are separated by 23 nucleotidesB158DRAFT_2288 and B158DRAFT_2289 overlap by 4 nucleotidesB158DRAFT_2289 and B158DRAFT_2290 overlap by 4 nucleotides B158DRAFT_2287: B158DRAFT_2287 - ATP phosphoribosyltransferase, at 451,971 to 452,819 _2287 B158DRAFT_2288: B158DRAFT_2288 - haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E, at 452,843 to 454,540 _2288 B158DRAFT_2289: B158DRAFT_2289 - imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19), at 454,537 to 455,133 _2289 B158DRAFT_2290: B158DRAFT_2290 - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit, at 455,130 to 455,738 _2290 Position (kb) 452 453 454 455Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 451.888 kb on + strandat 451.912 kb on - strandat 452.082 kb on + strand, within B158DRAFT_2287at 452.118 kb on + strand, within B158DRAFT_2287at 452.118 kb on + strand, within B158DRAFT_2287at 452.166 kb on - strand, within B158DRAFT_2287at 452.203 kb on + strand, within B158DRAFT_2287at 452.211 kb on - strand, within B158DRAFT_2287at 452.228 kb on + strand, within B158DRAFT_2287at 452.259 kb on + strand, within B158DRAFT_2287at 452.259 kb on + strand, within B158DRAFT_2287at 452.259 kb on + strand, within B158DRAFT_2287at 452.289 kb on - strand, within B158DRAFT_2287at 452.369 kb on + strand, within B158DRAFT_2287at 452.536 kb on - strand, within B158DRAFT_2287at 452.583 kb on + strand, within B158DRAFT_2287at 452.583 kb on + strand, within B158DRAFT_2287at 452.583 kb on + strand, within B158DRAFT_2287at 452.585 kb on + strand, within B158DRAFT_2287at 452.591 kb on - strand, within B158DRAFT_2287at 452.592 kb on - strand, within B158DRAFT_2287at 452.623 kb on + strand, within B158DRAFT_2287at 452.623 kb on + strand, within B158DRAFT_2287at 452.623 kb on + strand, within B158DRAFT_2287at 452.623 kb on + strand, within B158DRAFT_2287at 452.623 kb on + strand, within B158DRAFT_2287at 452.623 kb on + strand, within B158DRAFT_2287at 452.631 kb on - strand, within B158DRAFT_2287at 452.631 kb on - strand, within B158DRAFT_2287at 452.646 kb on + strand, within B158DRAFT_2287at 452.700 kb on + strand, within B158DRAFT_2287at 452.832 kb on + strandat 452.832 kb on + strandat 452.832 kb on + strandat 452.832 kb on + strandat 452.883 kb on + strandat 452.916 kb on + strandat 452.916 kb on + strandat 452.947 kb on - strandat 452.953 kb on + strandat 452.953 kb on + strandat 452.958 kb on + strandat 452.958 kb on + strandat 452.958 kb on + strandat 452.962 kb on + strandat 452.966 kb on - strandat 453.018 kb on + strand, within B158DRAFT_2288at 453.075 kb on + strand, within B158DRAFT_2288at 453.075 kb on + strand, within B158DRAFT_2288at 453.083 kb on - strand, within B158DRAFT_2288at 453.083 kb on - strand, within B158DRAFT_2288at 453.132 kb on + strand, within B158DRAFT_2288at 453.140 kb on - strand, within B158DRAFT_2288at 453.168 kb on - strand, within B158DRAFT_2288at 453.205 kb on + strand, within B158DRAFT_2288at 453.250 kb on + strand, within B158DRAFT_2288at 453.262 kb on - strand, within B158DRAFT_2288at 453.276 kb on + strand, within B158DRAFT_2288at 453.286 kb on + strand, within B158DRAFT_2288at 453.294 kb on - strand, within B158DRAFT_2288at 453.294 kb on - strand, within B158DRAFT_2288at 453.374 kb on - strand, within B158DRAFT_2288at 453.406 kb on + strand, within B158DRAFT_2288at 453.406 kb on + strand, within B158DRAFT_2288at 453.415 kb on + strand, within B158DRAFT_2288at 453.415 kb on + strand, within B158DRAFT_2288at 453.423 kb on - strand, within B158DRAFT_2288at 453.423 kb on - strand, within B158DRAFT_2288at 453.423 kb on - strand, within B158DRAFT_2288at 453.423 kb on - strand, within B158DRAFT_2288at 453.423 kb on - strand, within B158DRAFT_2288at 453.435 kb on - strand, within B158DRAFT_2288at 453.467 kb on - strand, within B158DRAFT_2288at 453.487 kb on + strand, within B158DRAFT_2288at 453.572 kb on - strand, within B158DRAFT_2288at 453.779 kb on - strand, within B158DRAFT_2288at 453.790 kb on + strand, within B158DRAFT_2288at 453.790 kb on + strand, within B158DRAFT_2288at 453.798 kb on - strand, within B158DRAFT_2288at 453.803 kb on - strand, within B158DRAFT_2288at 453.849 kb on - strand, within B158DRAFT_2288at 453.861 kb on + strand, within B158DRAFT_2288at 453.878 kb on + strand, within B158DRAFT_2288at 453.888 kb on + strand, within B158DRAFT_2288at 453.946 kb on + strand, within B158DRAFT_2288at 454.041 kb on + strand, within B158DRAFT_2288at 454.041 kb on + strand, within B158DRAFT_2288at 454.084 kb on - strand, within B158DRAFT_2288at 454.105 kb on + strand, within B158DRAFT_2288at 454.113 kb on - strand, within B158DRAFT_2288at 454.113 kb on - strand, within B158DRAFT_2288at 454.142 kb on + strand, within B158DRAFT_2288at 454.142 kb on + strand, within B158DRAFT_2288at 454.142 kb on + strand, within B158DRAFT_2288at 454.142 kb on + strand, within B158DRAFT_2288at 454.142 kb on + strand, within B158DRAFT_2288at 454.142 kb on + strand, within B158DRAFT_2288at 454.142 kb on + strand, within B158DRAFT_2288at 454.150 kb on - strand, within B158DRAFT_2288at 454.150 kb on - strand, within B158DRAFT_2288at 454.150 kb on - strand, within B158DRAFT_2288at 454.150 kb on - strand, within B158DRAFT_2288at 454.173 kb on + strand, within B158DRAFT_2288at 454.173 kb on + strand, within B158DRAFT_2288at 454.173 kb on + strand, within B158DRAFT_2288at 454.173 kb on + strand, within B158DRAFT_2288at 454.173 kb on + strand, within B158DRAFT_2288at 454.173 kb on + strand, within B158DRAFT_2288at 454.173 kb on + strand, within B158DRAFT_2288at 454.181 kb on - strand, within B158DRAFT_2288at 454.181 kb on - strand, within B158DRAFT_2288at 454.181 kb on - strand, within B158DRAFT_2288at 454.181 kb on - strand, within B158DRAFT_2288at 454.181 kb on - strand, within B158DRAFT_2288at 454.181 kb on - strand, within B158DRAFT_2288at 454.324 kb on + strand, within B158DRAFT_2288at 454.324 kb on + strand, within B158DRAFT_2288at 454.324 kb on + strand, within B158DRAFT_2288at 454.324 kb on + strand, within B158DRAFT_2288at 454.324 kb on + strand, within B158DRAFT_2288at 454.332 kb on - strand, within B158DRAFT_2288at 454.332 kb on - strand, within B158DRAFT_2288at 454.332 kb on - strand, within B158DRAFT_2288at 454.352 kb on - strand, within B158DRAFT_2288at 454.352 kb on - strand, within B158DRAFT_2288at 454.361 kb on + strand, within B158DRAFT_2288at 454.419 kb on - strandat 454.463 kb on - strandat 454.612 kb on - strand, within B158DRAFT_2289at 454.641 kb on + strand, within B158DRAFT_2289at 454.646 kb on + strand, within B158DRAFT_2289at 454.667 kb on + strand, within B158DRAFT_2289at 454.797 kb on + strand, within B158DRAFT_2289at 454.797 kb on + strand, within B158DRAFT_2289at 454.805 kb on - strand, within B158DRAFT_2289at 454.858 kb on + strand, within B158DRAFT_2289at 454.863 kb on + strand, within B158DRAFT_2289at 454.866 kb on - strand, within B158DRAFT_2289at 454.874 kb on + strand, within B158DRAFT_2289at 454.876 kb on + strand, within B158DRAFT_2289at 454.968 kb on + strand, within B158DRAFT_2289at 454.969 kb on + strand, within B158DRAFT_2289at 455.007 kb on + strand, within B158DRAFT_2289at 455.007 kb on + strand, within B158DRAFT_2289at 455.007 kb on + strand, within B158DRAFT_2289at 455.007 kb on + strand, within B158DRAFT_2289at 455.015 kb on - strand, within B158DRAFT_2289at 455.015 kb on - strand, within B158DRAFT_2289at 455.015 kb on - strand, within B158DRAFT_2289at 455.015 kb on - strand, within B158DRAFT_2289at 455.044 kb on + strand, within B158DRAFT_2289at 455.069 kb on + strand, within B158DRAFT_2289at 455.077 kb on - strandat 455.093 kb on + strandat 455.122 kb on - strandat 455.129 kb on - strandat 455.137 kb on + strandat 455.137 kb on + strandat 455.224 kb on + strand, within B158DRAFT_2290at 455.230 kb on + strand, within B158DRAFT_2290at 455.246 kb on - strand, within B158DRAFT_2290at 455.276 kb on + strand, within B158DRAFT_2290at 455.279 kb on - strand, within B158DRAFT_2290at 455.349 kb on - strand, within B158DRAFT_2290at 455.391 kb on + strand, within B158DRAFT_2290at 455.398 kb on + strand, within B158DRAFT_2290at 455.409 kb on + strand, within B158DRAFT_2290at 455.412 kb on - strand, within B158DRAFT_2290at 455.412 kb on - strand, within B158DRAFT_2290at 455.420 kb on - strand, within B158DRAFT_2290

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml
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451,888 + +0.2
451,912 - -1.4
452,082 + B158DRAFT_2287 0.13 +1.2
452,118 + B158DRAFT_2287 0.17 +0.9
452,118 + B158DRAFT_2287 0.17 -0.7
452,166 - B158DRAFT_2287 0.23 +1.3
452,203 + B158DRAFT_2287 0.27 +0.6
452,211 - B158DRAFT_2287 0.28 -0.5
452,228 + B158DRAFT_2287 0.30 -0.5
452,259 + B158DRAFT_2287 0.34 -0.2
452,259 + B158DRAFT_2287 0.34 -0.4
452,259 + B158DRAFT_2287 0.34 -0.9
452,289 - B158DRAFT_2287 0.37 +1.1
452,369 + B158DRAFT_2287 0.47 -3.4
452,536 - B158DRAFT_2287 0.67 +0.4
452,583 + B158DRAFT_2287 0.72 +1.4
452,583 + B158DRAFT_2287 0.72 +0.2
452,583 + B158DRAFT_2287 0.72 -1.0
452,585 + B158DRAFT_2287 0.72 +1.8
452,591 - B158DRAFT_2287 0.73 -0.4
452,592 - B158DRAFT_2287 0.73 -1.9
452,623 + B158DRAFT_2287 0.77 -0.9
452,623 + B158DRAFT_2287 0.77 +0.1
452,623 + B158DRAFT_2287 0.77 +0.1
452,623 + B158DRAFT_2287 0.77 +0.0
452,623 + B158DRAFT_2287 0.77 +0.2
452,623 + B158DRAFT_2287 0.77 +0.1
452,631 - B158DRAFT_2287 0.78 -2.3
452,631 - B158DRAFT_2287 0.78 -0.0
452,646 + B158DRAFT_2287 0.80 -3.6
452,700 + B158DRAFT_2287 0.86 -2.4
452,832 + -0.6
452,832 + +0.2
452,832 + -2.7
452,832 + -1.1
452,883 + -2.2
452,916 + +1.3
452,916 + +0.8
452,947 - -2.4
452,953 + +0.3
452,953 + +0.2
452,958 + -0.7
452,958 + -3.4
452,958 + +0.6
452,962 + +0.3
452,966 - -0.9
453,018 + B158DRAFT_2288 0.10 -1.5
453,075 + B158DRAFT_2288 0.14 -1.6
453,075 + B158DRAFT_2288 0.14 +0.1
453,083 - B158DRAFT_2288 0.14 -0.4
453,083 - B158DRAFT_2288 0.14 -0.2
453,132 + B158DRAFT_2288 0.17 +0.3
453,140 - B158DRAFT_2288 0.17 +0.0
453,168 - B158DRAFT_2288 0.19 -3.8
453,205 + B158DRAFT_2288 0.21 -0.9
453,250 + B158DRAFT_2288 0.24 -0.4
453,262 - B158DRAFT_2288 0.25 -3.1
453,276 + B158DRAFT_2288 0.26 -0.5
453,286 + B158DRAFT_2288 0.26 -0.1
453,294 - B158DRAFT_2288 0.27 -2.2
453,294 - B158DRAFT_2288 0.27 -0.3
453,374 - B158DRAFT_2288 0.31 -0.3
453,406 + B158DRAFT_2288 0.33 +0.5
453,406 + B158DRAFT_2288 0.33 -1.2
453,415 + B158DRAFT_2288 0.34 +0.2
453,415 + B158DRAFT_2288 0.34 -0.5
453,423 - B158DRAFT_2288 0.34 -0.2
453,423 - B158DRAFT_2288 0.34 -1.7
453,423 - B158DRAFT_2288 0.34 -1.6
453,423 - B158DRAFT_2288 0.34 -0.6
453,423 - B158DRAFT_2288 0.34 -4.4
453,435 - B158DRAFT_2288 0.35 -0.6
453,467 - B158DRAFT_2288 0.37 +0.4
453,487 + B158DRAFT_2288 0.38 -2.1
453,572 - B158DRAFT_2288 0.43 -0.6
453,779 - B158DRAFT_2288 0.55 +0.8
453,790 + B158DRAFT_2288 0.56 -0.8
453,790 + B158DRAFT_2288 0.56 -1.0
453,798 - B158DRAFT_2288 0.56 -5.2
453,803 - B158DRAFT_2288 0.57 -1.0
453,849 - B158DRAFT_2288 0.59 -1.4
453,861 + B158DRAFT_2288 0.60 -0.9
453,878 + B158DRAFT_2288 0.61 +0.5
453,888 + B158DRAFT_2288 0.62 +1.6
453,946 + B158DRAFT_2288 0.65 +0.1
454,041 + B158DRAFT_2288 0.71 -4.1
454,041 + B158DRAFT_2288 0.71 +0.4
454,084 - B158DRAFT_2288 0.73 -3.5
454,105 + B158DRAFT_2288 0.74 +0.0
454,113 - B158DRAFT_2288 0.75 -0.9
454,113 - B158DRAFT_2288 0.75 -1.1
454,142 + B158DRAFT_2288 0.77 +0.6
454,142 + B158DRAFT_2288 0.77 +0.6
454,142 + B158DRAFT_2288 0.77 -2.8
454,142 + B158DRAFT_2288 0.77 -0.8
454,142 + B158DRAFT_2288 0.77 +0.3
454,142 + B158DRAFT_2288 0.77 +0.8
454,142 + B158DRAFT_2288 0.77 -1.4
454,150 - B158DRAFT_2288 0.77 +0.3
454,150 - B158DRAFT_2288 0.77 +1.0
454,150 - B158DRAFT_2288 0.77 -4.0
454,150 - B158DRAFT_2288 0.77 -1.3
454,173 + B158DRAFT_2288 0.78 +0.3
454,173 + B158DRAFT_2288 0.78 +0.3
454,173 + B158DRAFT_2288 0.78 -0.4
454,173 + B158DRAFT_2288 0.78 +0.4
454,173 + B158DRAFT_2288 0.78 -0.2
454,173 + B158DRAFT_2288 0.78 -0.2
454,173 + B158DRAFT_2288 0.78 -0.5
454,181 - B158DRAFT_2288 0.79 -3.6
454,181 - B158DRAFT_2288 0.79 +0.4
454,181 - B158DRAFT_2288 0.79 +0.4
454,181 - B158DRAFT_2288 0.79 +1.7
454,181 - B158DRAFT_2288 0.79 +1.9
454,181 - B158DRAFT_2288 0.79 -0.1
454,324 + B158DRAFT_2288 0.87 +0.1
454,324 + B158DRAFT_2288 0.87 -0.7
454,324 + B158DRAFT_2288 0.87 -2.5
454,324 + B158DRAFT_2288 0.87 -3.0
454,324 + B158DRAFT_2288 0.87 +0.5
454,332 - B158DRAFT_2288 0.88 +0.0
454,332 - B158DRAFT_2288 0.88 +0.9
454,332 - B158DRAFT_2288 0.88 -0.7
454,352 - B158DRAFT_2288 0.89 +0.4
454,352 - B158DRAFT_2288 0.89 -3.3
454,361 + B158DRAFT_2288 0.89 +0.3
454,419 - +1.5
454,463 - -0.5
454,612 - B158DRAFT_2289 0.13 -0.8
454,641 + B158DRAFT_2289 0.17 +1.1
454,646 + B158DRAFT_2289 0.18 -0.8
454,667 + B158DRAFT_2289 0.22 +0.1
454,797 + B158DRAFT_2289 0.44 -0.6
454,797 + B158DRAFT_2289 0.44 +0.9
454,805 - B158DRAFT_2289 0.45 +0.4
454,858 + B158DRAFT_2289 0.54 -0.2
454,863 + B158DRAFT_2289 0.55 -1.0
454,866 - B158DRAFT_2289 0.55 -0.1
454,874 + B158DRAFT_2289 0.56 +1.5
454,876 + B158DRAFT_2289 0.57 -0.1
454,968 + B158DRAFT_2289 0.72 -1.1
454,969 + B158DRAFT_2289 0.72 -0.9
455,007 + B158DRAFT_2289 0.79 +0.3
455,007 + B158DRAFT_2289 0.79 -0.2
455,007 + B158DRAFT_2289 0.79 +0.0
455,007 + B158DRAFT_2289 0.79 -3.1
455,015 - B158DRAFT_2289 0.80 -0.1
455,015 - B158DRAFT_2289 0.80 -3.4
455,015 - B158DRAFT_2289 0.80 +0.1
455,015 - B158DRAFT_2289 0.80 +0.1
455,044 + B158DRAFT_2289 0.85 -2.9
455,069 + B158DRAFT_2289 0.89 +0.7
455,077 - +1.1
455,093 + -0.0
455,122 - -1.5
455,129 - -0.7
455,137 + -0.2
455,137 + -4.6
455,224 + B158DRAFT_2290 0.15 +1.2
455,230 + B158DRAFT_2290 0.16 +1.1
455,246 - B158DRAFT_2290 0.19 +0.8
455,276 + B158DRAFT_2290 0.24 +0.3
455,279 - B158DRAFT_2290 0.24 -0.1
455,349 - B158DRAFT_2290 0.36 +1.3
455,391 + B158DRAFT_2290 0.43 +0.7
455,398 + B158DRAFT_2290 0.44 +0.6
455,409 + B158DRAFT_2290 0.46 +1.3
455,412 - B158DRAFT_2290 0.46 -0.9
455,412 - B158DRAFT_2290 0.46 +0.4
455,420 - B158DRAFT_2290 0.48 +0.1

Or see this region's nucleotide sequence