Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2234 and B158DRAFT_2235 are separated by 18 nucleotides B158DRAFT_2235 and B158DRAFT_2236 are separated by 57 nucleotides B158DRAFT_2236 and B158DRAFT_2237 are separated by 4 nucleotides
B158DRAFT_2234: B158DRAFT_2234 - 2-isopropylmalate synthase (EC 2.3.3.13), at 388,438 to 389,592
_2234
B158DRAFT_2235: B158DRAFT_2235 - hypothetical protein, at 389,611 to 390,108
_2235
B158DRAFT_2236: B158DRAFT_2236 - [SSU ribosomal protein S18P]-alanine acetyltransferase (EC 2.3.1.128), at 390,166 to 390,624
_2236
B158DRAFT_2237: B158DRAFT_2237 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 390,629 to 394,015
_2237
Position (kb) 389
390
391 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 388.642 kb on - strand, within B158DRAFT_2234 at 388.704 kb on + strand, within B158DRAFT_2234 at 388.704 kb on + strand, within B158DRAFT_2234 at 388.704 kb on + strand, within B158DRAFT_2234 at 388.712 kb on - strand, within B158DRAFT_2234 at 388.729 kb on + strand, within B158DRAFT_2234 at 388.737 kb on - strand, within B158DRAFT_2234 at 388.737 kb on - strand, within B158DRAFT_2234 at 388.779 kb on + strand, within B158DRAFT_2234 at 388.792 kb on - strand, within B158DRAFT_2234 at 388.947 kb on + strand, within B158DRAFT_2234 at 388.955 kb on - strand, within B158DRAFT_2234 at 388.961 kb on + strand, within B158DRAFT_2234 at 388.969 kb on - strand, within B158DRAFT_2234 at 388.969 kb on - strand, within B158DRAFT_2234 at 388.969 kb on - strand, within B158DRAFT_2234 at 389.082 kb on + strand, within B158DRAFT_2234 at 389.095 kb on + strand, within B158DRAFT_2234 at 389.103 kb on - strand, within B158DRAFT_2234 at 389.183 kb on - strand, within B158DRAFT_2234 at 389.297 kb on - strand, within B158DRAFT_2234 at 389.373 kb on - strand, within B158DRAFT_2234 at 389.390 kb on + strand, within B158DRAFT_2234 at 389.444 kb on - strand, within B158DRAFT_2234 at 389.484 kb on - strand at 389.576 kb on + strand at 389.586 kb on + strand at 389.586 kb on + strand at 389.678 kb on + strand, within B158DRAFT_2235 at 389.753 kb on - strand, within B158DRAFT_2235 at 389.805 kb on - strand, within B158DRAFT_2235 at 389.814 kb on + strand, within B158DRAFT_2235 at 389.838 kb on - strand, within B158DRAFT_2235 at 389.871 kb on + strand, within B158DRAFT_2235 at 389.871 kb on + strand, within B158DRAFT_2235 at 389.871 kb on + strand, within B158DRAFT_2235 at 389.871 kb on + strand, within B158DRAFT_2235 at 389.871 kb on + strand, within B158DRAFT_2235 at 389.871 kb on + strand, within B158DRAFT_2235 at 389.871 kb on + strand, within B158DRAFT_2235 at 389.871 kb on + strand, within B158DRAFT_2235 at 389.871 kb on + strand, within B158DRAFT_2235 at 389.871 kb on + strand, within B158DRAFT_2235 at 389.871 kb on + strand, within B158DRAFT_2235 at 389.871 kb on + strand, within B158DRAFT_2235 at 389.871 kb on + strand, within B158DRAFT_2235 at 389.871 kb on + strand, within B158DRAFT_2235 at 389.871 kb on + strand, within B158DRAFT_2235 at 389.879 kb on - strand, within B158DRAFT_2235 at 389.879 kb on - strand, within B158DRAFT_2235 at 389.879 kb on - strand, within B158DRAFT_2235 at 389.879 kb on - strand, within B158DRAFT_2235 at 389.879 kb on - strand, within B158DRAFT_2235 at 389.909 kb on + strand, within B158DRAFT_2235 at 389.959 kb on + strand, within B158DRAFT_2235 at 389.982 kb on + strand, within B158DRAFT_2235 at 389.988 kb on + strand, within B158DRAFT_2235 at 389.988 kb on + strand, within B158DRAFT_2235 at 389.998 kb on + strand, within B158DRAFT_2235 at 390.021 kb on + strand, within B158DRAFT_2235 at 390.026 kb on + strand, within B158DRAFT_2235 at 390.034 kb on - strand, within B158DRAFT_2235 at 390.098 kb on + strand at 390.098 kb on + strand at 390.106 kb on - strand at 390.225 kb on + strand, within B158DRAFT_2236 at 390.225 kb on + strand, within B158DRAFT_2236 at 390.233 kb on - strand, within B158DRAFT_2236 at 390.233 kb on - strand, within B158DRAFT_2236 at 390.233 kb on - strand, within B158DRAFT_2236 at 390.235 kb on + strand, within B158DRAFT_2236 at 390.235 kb on + strand, within B158DRAFT_2236 at 390.243 kb on - strand, within B158DRAFT_2236 at 390.243 kb on - strand, within B158DRAFT_2236 at 390.256 kb on - strand, within B158DRAFT_2236 at 390.266 kb on - strand, within B158DRAFT_2236 at 390.268 kb on + strand, within B158DRAFT_2236 at 390.285 kb on + strand, within B158DRAFT_2236 at 390.287 kb on + strand, within B158DRAFT_2236 at 390.287 kb on + strand, within B158DRAFT_2236 at 390.287 kb on + strand, within B158DRAFT_2236 at 390.298 kb on + strand, within B158DRAFT_2236 at 390.300 kb on - strand, within B158DRAFT_2236 at 390.302 kb on + strand, within B158DRAFT_2236 at 390.306 kb on - strand, within B158DRAFT_2236 at 390.319 kb on + strand, within B158DRAFT_2236 at 390.407 kb on + strand, within B158DRAFT_2236 at 390.447 kb on + strand, within B158DRAFT_2236 at 390.455 kb on + strand, within B158DRAFT_2236 at 390.455 kb on + strand, within B158DRAFT_2236 at 390.463 kb on - strand, within B158DRAFT_2236 at 390.493 kb on - strand, within B158DRAFT_2236 at 390.653 kb on - strand at 390.782 kb on - strand at 390.797 kb on - strand at 390.944 kb on - strand at 390.958 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml remove 388,642 - B158DRAFT_2234 0.18 -1.5 388,704 + B158DRAFT_2234 0.23 -1.0 388,704 + B158DRAFT_2234 0.23 +0.2 388,704 + B158DRAFT_2234 0.23 +0.4 388,712 - B158DRAFT_2234 0.24 -1.0 388,729 + B158DRAFT_2234 0.25 +0.7 388,737 - B158DRAFT_2234 0.26 -0.3 388,737 - B158DRAFT_2234 0.26 +1.0 388,779 + B158DRAFT_2234 0.30 +0.7 388,792 - B158DRAFT_2234 0.31 -0.2 388,947 + B158DRAFT_2234 0.44 -0.1 388,955 - B158DRAFT_2234 0.45 -0.8 388,961 + B158DRAFT_2234 0.45 -4.2 388,969 - B158DRAFT_2234 0.46 +0.2 388,969 - B158DRAFT_2234 0.46 +0.9 388,969 - B158DRAFT_2234 0.46 -0.3 389,082 + B158DRAFT_2234 0.56 +0.9 389,095 + B158DRAFT_2234 0.57 +1.3 389,103 - B158DRAFT_2234 0.58 +1.0 389,183 - B158DRAFT_2234 0.65 +0.2 389,297 - B158DRAFT_2234 0.74 -3.8 389,373 - B158DRAFT_2234 0.81 -0.6 389,390 + B158DRAFT_2234 0.82 +0.2 389,444 - B158DRAFT_2234 0.87 -1.8 389,484 - -0.4 389,576 + +0.1 389,586 + -0.4 389,586 + -0.3 389,678 + B158DRAFT_2235 0.13 +0.7 389,753 - B158DRAFT_2235 0.29 +1.3 389,805 - B158DRAFT_2235 0.39 -0.9 389,814 + B158DRAFT_2235 0.41 -0.5 389,838 - B158DRAFT_2235 0.46 +0.8 389,871 + B158DRAFT_2235 0.52 -1.7 389,871 + B158DRAFT_2235 0.52 +0.6 389,871 + B158DRAFT_2235 0.52 -0.1 389,871 + B158DRAFT_2235 0.52 -0.9 389,871 + B158DRAFT_2235 0.52 -3.5 389,871 + B158DRAFT_2235 0.52 +1.5 389,871 + B158DRAFT_2235 0.52 -0.2 389,871 + B158DRAFT_2235 0.52 -2.5 389,871 + B158DRAFT_2235 0.52 -3.8 389,871 + B158DRAFT_2235 0.52 -0.5 389,871 + B158DRAFT_2235 0.52 -3.8 389,871 + B158DRAFT_2235 0.52 +0.3 389,871 + B158DRAFT_2235 0.52 -3.6 389,871 + B158DRAFT_2235 0.52 +0.5 389,871 + B158DRAFT_2235 0.52 -0.6 389,879 - B158DRAFT_2235 0.54 +1.1 389,879 - B158DRAFT_2235 0.54 +1.1 389,879 - B158DRAFT_2235 0.54 -0.3 389,879 - B158DRAFT_2235 0.54 +0.6 389,879 - B158DRAFT_2235 0.54 -0.2 389,909 + B158DRAFT_2235 0.60 -3.0 389,959 + B158DRAFT_2235 0.70 -0.5 389,982 + B158DRAFT_2235 0.74 +0.8 389,988 + B158DRAFT_2235 0.76 +0.3 389,988 + B158DRAFT_2235 0.76 +0.3 389,998 + B158DRAFT_2235 0.78 -0.2 390,021 + B158DRAFT_2235 0.82 +0.1 390,026 + B158DRAFT_2235 0.83 +0.2 390,034 - B158DRAFT_2235 0.85 +0.4 390,098 + -3.3 390,098 + -0.2 390,106 - -0.5 390,225 + B158DRAFT_2236 0.13 -1.1 390,225 + B158DRAFT_2236 0.13 +0.9 390,233 - B158DRAFT_2236 0.15 -0.2 390,233 - B158DRAFT_2236 0.15 -0.3 390,233 - B158DRAFT_2236 0.15 +0.6 390,235 + B158DRAFT_2236 0.15 -1.0 390,235 + B158DRAFT_2236 0.15 -2.2 390,243 - B158DRAFT_2236 0.17 +0.2 390,243 - B158DRAFT_2236 0.17 +0.6 390,256 - B158DRAFT_2236 0.20 -0.2 390,266 - B158DRAFT_2236 0.22 +0.0 390,268 + B158DRAFT_2236 0.22 -2.3 390,285 + B158DRAFT_2236 0.26 +0.1 390,287 + B158DRAFT_2236 0.26 +1.2 390,287 + B158DRAFT_2236 0.26 -0.2 390,287 + B158DRAFT_2236 0.26 +0.4 390,298 + B158DRAFT_2236 0.29 +1.1 390,300 - B158DRAFT_2236 0.29 -0.2 390,302 + B158DRAFT_2236 0.30 -0.4 390,306 - B158DRAFT_2236 0.31 -0.2 390,319 + B158DRAFT_2236 0.33 -0.2 390,407 + B158DRAFT_2236 0.53 +0.7 390,447 + B158DRAFT_2236 0.61 -0.7 390,455 + B158DRAFT_2236 0.63 -0.3 390,455 + B158DRAFT_2236 0.63 +0.1 390,463 - B158DRAFT_2236 0.65 -1.8 390,493 - B158DRAFT_2236 0.71 +0.1 390,653 - -0.4 390,782 - +0.2 390,797 - -0.5 390,944 - -1.0 390,958 - +0.2
Or see this region's nucleotide sequence