Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2181 and B158DRAFT_2182 are separated by 149 nucleotides B158DRAFT_2182 and B158DRAFT_2183 are separated by 154 nucleotides
B158DRAFT_2181: B158DRAFT_2181 - Negative regulator of sigma E activity, at 328,361 to 329,041
_2181
B158DRAFT_2182: B158DRAFT_2182 - positive regulator of sigma(E), RseC/MucC, at 329,191 to 329,682
_2182
B158DRAFT_2183: B158DRAFT_2183 - periplasmic serine protease, Do/DeqQ family, at 329,837 to 331,138
_2183
Position (kb) 329
330 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2
3
4 at 328.593 kb on + strand, within B158DRAFT_2181 at 328.629 kb on + strand, within B158DRAFT_2181 at 328.637 kb on - strand, within B158DRAFT_2181 at 328.637 kb on - strand, within B158DRAFT_2181 at 328.644 kb on + strand, within B158DRAFT_2181 at 328.644 kb on + strand, within B158DRAFT_2181 at 328.765 kb on + strand, within B158DRAFT_2181 at 328.947 kb on - strand, within B158DRAFT_2181 at 328.981 kb on + strand at 329.083 kb on + strand at 329.201 kb on + strand at 329.561 kb on + strand, within B158DRAFT_2182 at 329.596 kb on + strand, within B158DRAFT_2182 at 329.671 kb on + strand at 329.691 kb on - strand at 329.839 kb on - strand at 329.864 kb on + strand at 329.967 kb on - strand at 329.980 kb on + strand, within B158DRAFT_2183 at 329.988 kb on - strand, within B158DRAFT_2183 at 329.988 kb on - strand, within B158DRAFT_2183 at 329.988 kb on - strand, within B158DRAFT_2183 at 330.011 kb on - strand, within B158DRAFT_2183 at 330.016 kb on + strand, within B158DRAFT_2183 at 330.031 kb on - strand, within B158DRAFT_2183 at 330.031 kb on - strand, within B158DRAFT_2183 at 330.032 kb on - strand, within B158DRAFT_2183 at 330.099 kb on + strand, within B158DRAFT_2183 at 330.107 kb on - strand, within B158DRAFT_2183 at 330.124 kb on + strand, within B158DRAFT_2183 at 330.124 kb on + strand, within B158DRAFT_2183 at 330.132 kb on - strand, within B158DRAFT_2183 at 330.132 kb on - strand, within B158DRAFT_2183 at 330.137 kb on - strand, within B158DRAFT_2183 at 330.144 kb on - strand, within B158DRAFT_2183 at 330.147 kb on + strand, within B158DRAFT_2183 at 330.162 kb on + strand, within B158DRAFT_2183 at 330.207 kb on + strand, within B158DRAFT_2183 at 330.207 kb on + strand, within B158DRAFT_2183 at 330.231 kb on + strand, within B158DRAFT_2183 at 330.304 kb on + strand, within B158DRAFT_2183 at 330.307 kb on - strand, within B158DRAFT_2183 at 330.309 kb on + strand, within B158DRAFT_2183 at 330.317 kb on - strand, within B158DRAFT_2183 at 330.317 kb on - strand, within B158DRAFT_2183 at 330.317 kb on - strand, within B158DRAFT_2183 at 330.317 kb on - strand, within B158DRAFT_2183 at 330.393 kb on - strand, within B158DRAFT_2183 at 330.395 kb on + strand, within B158DRAFT_2183 at 330.413 kb on - strand, within B158DRAFT_2183 at 330.413 kb on - strand, within B158DRAFT_2183 at 330.532 kb on + strand, within B158DRAFT_2183 at 330.546 kb on + strand, within B158DRAFT_2183 at 330.555 kb on - strand, within B158DRAFT_2183 at 330.572 kb on + strand, within B158DRAFT_2183 at 330.572 kb on + strand, within B158DRAFT_2183 at 330.572 kb on + strand, within B158DRAFT_2183 at 330.577 kb on + strand, within B158DRAFT_2183 at 330.577 kb on + strand, within B158DRAFT_2183 at 330.577 kb on + strand, within B158DRAFT_2183 at 330.577 kb on + strand, within B158DRAFT_2183 at 330.580 kb on - strand, within B158DRAFT_2183 at 330.580 kb on - strand, within B158DRAFT_2183 at 330.580 kb on - strand, within B158DRAFT_2183 at 330.580 kb on - strand, within B158DRAFT_2183 at 330.585 kb on - strand, within B158DRAFT_2183 at 330.590 kb on - strand, within B158DRAFT_2183 at 330.635 kb on - strand, within B158DRAFT_2183 at 330.662 kb on + strand, within B158DRAFT_2183 at 330.662 kb on + strand, within B158DRAFT_2183 at 330.663 kb on + strand, within B158DRAFT_2183 at 330.663 kb on + strand, within B158DRAFT_2183 at 330.670 kb on + strand, within B158DRAFT_2183 at 330.671 kb on - strand, within B158DRAFT_2183 at 330.671 kb on - strand, within B158DRAFT_2183 at 330.671 kb on - strand, within B158DRAFT_2183
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml remove 328,593 + B158DRAFT_2181 0.34 -2.2 328,629 + B158DRAFT_2181 0.39 -0.0 328,637 - B158DRAFT_2181 0.41 -0.6 328,637 - B158DRAFT_2181 0.41 -0.2 328,644 + B158DRAFT_2181 0.42 -0.5 328,644 + B158DRAFT_2181 0.42 -0.4 328,765 + B158DRAFT_2181 0.59 -1.9 328,947 - B158DRAFT_2181 0.86 -0.2 328,981 + -0.3 329,083 + +0.4 329,201 + -1.4 329,561 + B158DRAFT_2182 0.75 -1.6 329,596 + B158DRAFT_2182 0.82 -1.3 329,671 + +0.2 329,691 - -0.2 329,839 - +1.4 329,864 + +4.0 329,967 - +1.0 329,980 + B158DRAFT_2183 0.11 -2.0 329,988 - B158DRAFT_2183 0.12 +0.6 329,988 - B158DRAFT_2183 0.12 +2.0 329,988 - B158DRAFT_2183 0.12 -0.8 330,011 - B158DRAFT_2183 0.13 -0.7 330,016 + B158DRAFT_2183 0.14 -0.1 330,031 - B158DRAFT_2183 0.15 +0.1 330,031 - B158DRAFT_2183 0.15 -0.5 330,032 - B158DRAFT_2183 0.15 -0.9 330,099 + B158DRAFT_2183 0.20 -1.8 330,107 - B158DRAFT_2183 0.21 +0.5 330,124 + B158DRAFT_2183 0.22 +0.5 330,124 + B158DRAFT_2183 0.22 +0.2 330,132 - B158DRAFT_2183 0.23 -0.5 330,132 - B158DRAFT_2183 0.23 +0.7 330,137 - B158DRAFT_2183 0.23 -2.2 330,144 - B158DRAFT_2183 0.24 +0.5 330,147 + B158DRAFT_2183 0.24 -1.6 330,162 + B158DRAFT_2183 0.25 +0.2 330,207 + B158DRAFT_2183 0.28 -1.2 330,207 + B158DRAFT_2183 0.28 -1.3 330,231 + B158DRAFT_2183 0.30 +0.4 330,304 + B158DRAFT_2183 0.36 +0.6 330,307 - B158DRAFT_2183 0.36 -0.2 330,309 + B158DRAFT_2183 0.36 +0.2 330,317 - B158DRAFT_2183 0.37 +0.8 330,317 - B158DRAFT_2183 0.37 -3.0 330,317 - B158DRAFT_2183 0.37 -0.4 330,317 - B158DRAFT_2183 0.37 +1.1 330,393 - B158DRAFT_2183 0.43 -0.0 330,395 + B158DRAFT_2183 0.43 +1.1 330,413 - B158DRAFT_2183 0.44 -0.3 330,413 - B158DRAFT_2183 0.44 -0.9 330,532 + B158DRAFT_2183 0.53 -1.0 330,546 + B158DRAFT_2183 0.54 +1.0 330,555 - B158DRAFT_2183 0.55 +0.2 330,572 + B158DRAFT_2183 0.56 +0.9 330,572 + B158DRAFT_2183 0.56 -2.9 330,572 + B158DRAFT_2183 0.56 -1.3 330,577 + B158DRAFT_2183 0.57 +1.3 330,577 + B158DRAFT_2183 0.57 -2.5 330,577 + B158DRAFT_2183 0.57 -0.6 330,577 + B158DRAFT_2183 0.57 -0.1 330,580 - B158DRAFT_2183 0.57 +1.3 330,580 - B158DRAFT_2183 0.57 -0.4 330,580 - B158DRAFT_2183 0.57 -1.2 330,580 - B158DRAFT_2183 0.57 -1.0 330,585 - B158DRAFT_2183 0.57 -4.8 330,590 - B158DRAFT_2183 0.58 +1.4 330,635 - B158DRAFT_2183 0.61 -4.1 330,662 + B158DRAFT_2183 0.63 -5.2 330,662 + B158DRAFT_2183 0.63 -4.3 330,663 + B158DRAFT_2183 0.63 -4.4 330,663 + B158DRAFT_2183 0.63 -5.8 330,670 + B158DRAFT_2183 0.64 -0.0 330,671 - B158DRAFT_2183 0.64 +1.3 330,671 - B158DRAFT_2183 0.64 +0.1 330,671 - B158DRAFT_2183 0.64 +0.3
Or see this region's nucleotide sequence