Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1714

Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1712 and B158DRAFT_1713 are separated by 13 nucleotidesB158DRAFT_1713 and B158DRAFT_1714 are separated by 27 nucleotidesB158DRAFT_1714 and B158DRAFT_1715 are separated by 2 nucleotidesB158DRAFT_1715 and B158DRAFT_1716 overlap by 1 nucleotides B158DRAFT_1712: B158DRAFT_1712 - hypothetical protein, at 1,787,521 to 1,788,528 _1712 B158DRAFT_1713: B158DRAFT_1713 - hypothetical protein, at 1,788,542 to 1,789,270 _1713 B158DRAFT_1714: B158DRAFT_1714 - hypothetical protein, at 1,789,298 to 1,789,897 _1714 B158DRAFT_1715: B158DRAFT_1715 - hypothetical protein, at 1,789,900 to 1,790,565 _1715 B158DRAFT_1716: B158DRAFT_1716 - hypothetical protein, at 1,790,565 to 1,791,479 _1716 Position (kb) 1789 1790Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2 3at 1788.305 kb on + strand, within B158DRAFT_1712at 1788.311 kb on - strand, within B158DRAFT_1712at 1788.311 kb on - strand, within B158DRAFT_1712at 1788.381 kb on - strand, within B158DRAFT_1712at 1788.439 kb on + strandat 1788.450 kb on + strandat 1788.458 kb on - strandat 1788.503 kb on - strandat 1788.504 kb on + strandat 1788.512 kb on - strandat 1788.512 kb on - strandat 1788.640 kb on - strand, within B158DRAFT_1713at 1788.676 kb on + strand, within B158DRAFT_1713at 1788.698 kb on - strand, within B158DRAFT_1713at 1788.731 kb on - strand, within B158DRAFT_1713at 1788.740 kb on + strand, within B158DRAFT_1713at 1788.741 kb on - strand, within B158DRAFT_1713at 1788.763 kb on - strand, within B158DRAFT_1713at 1788.976 kb on + strand, within B158DRAFT_1713at 1788.994 kb on - strand, within B158DRAFT_1713at 1789.026 kb on - strand, within B158DRAFT_1713at 1789.100 kb on + strand, within B158DRAFT_1713at 1789.110 kb on + strand, within B158DRAFT_1713at 1789.110 kb on + strand, within B158DRAFT_1713at 1789.110 kb on + strand, within B158DRAFT_1713at 1789.118 kb on - strand, within B158DRAFT_1713at 1789.262 kb on - strandat 1789.276 kb on - strandat 1789.320 kb on + strandat 1789.737 kb on + strand, within B158DRAFT_1714at 1789.737 kb on + strand, within B158DRAFT_1714at 1789.737 kb on + strand, within B158DRAFT_1714at 1789.745 kb on - strand, within B158DRAFT_1714at 1789.745 kb on - strand, within B158DRAFT_1714at 1789.745 kb on - strand, within B158DRAFT_1714at 1789.781 kb on + strand, within B158DRAFT_1714at 1789.789 kb on - strand, within B158DRAFT_1714at 1789.807 kb on - strand, within B158DRAFT_1714at 1789.850 kb on + strandat 1789.873 kb on - strandat 1790.087 kb on - strand, within B158DRAFT_1715at 1790.245 kb on + strand, within B158DRAFT_1715at 1790.277 kb on - strand, within B158DRAFT_1715at 1790.294 kb on - strand, within B158DRAFT_1715at 1790.311 kb on + strand, within B158DRAFT_1715at 1790.554 kb on + strandat 1790.651 kb on + strandat 1790.651 kb on + strandat 1790.681 kb on + strand, within B158DRAFT_1716at 1790.744 kb on + strand, within B158DRAFT_1716at 1790.744 kb on + strand, within B158DRAFT_1716at 1790.744 kb on + strand, within B158DRAFT_1716at 1790.744 kb on + strand, within B158DRAFT_1716at 1790.744 kb on + strand, within B158DRAFT_1716at 1790.744 kb on + strand, within B158DRAFT_1716at 1790.744 kb on + strand, within B158DRAFT_1716at 1790.747 kb on - strand, within B158DRAFT_1716at 1790.747 kb on - strand, within B158DRAFT_1716at 1790.752 kb on - strand, within B158DRAFT_1716at 1790.752 kb on - strand, within B158DRAFT_1716at 1790.752 kb on - strand, within B158DRAFT_1716at 1790.752 kb on - strand, within B158DRAFT_1716at 1790.752 kb on - strand, within B158DRAFT_1716at 1790.752 kb on - strand, within B158DRAFT_1716at 1790.752 kb on - strand, within B158DRAFT_1716at 1790.752 kb on - strand, within B158DRAFT_1716at 1790.752 kb on - strand, within B158DRAFT_1716at 1790.752 kb on - strand, within B158DRAFT_1716at 1790.845 kb on + strand, within B158DRAFT_1716at 1790.845 kb on + strand, within B158DRAFT_1716

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml
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1,788,305 + B158DRAFT_1712 0.78 -0.4
1,788,311 - B158DRAFT_1712 0.78 +0.3
1,788,311 - B158DRAFT_1712 0.78 -3.9
1,788,381 - B158DRAFT_1712 0.85 +0.4
1,788,439 + -0.3
1,788,450 + +0.4
1,788,458 - -2.2
1,788,503 - +0.2
1,788,504 + -0.3
1,788,512 - -1.1
1,788,512 - -0.2
1,788,640 - B158DRAFT_1713 0.13 -1.4
1,788,676 + B158DRAFT_1713 0.18 -1.8
1,788,698 - B158DRAFT_1713 0.21 +0.1
1,788,731 - B158DRAFT_1713 0.26 -0.1
1,788,740 + B158DRAFT_1713 0.27 +0.1
1,788,741 - B158DRAFT_1713 0.27 -0.8
1,788,763 - B158DRAFT_1713 0.30 -0.2
1,788,976 + B158DRAFT_1713 0.60 -0.5
1,788,994 - B158DRAFT_1713 0.62 -0.4
1,789,026 - B158DRAFT_1713 0.66 +3.3
1,789,100 + B158DRAFT_1713 0.77 -0.6
1,789,110 + B158DRAFT_1713 0.78 +0.3
1,789,110 + B158DRAFT_1713 0.78 -0.2
1,789,110 + B158DRAFT_1713 0.78 +0.4
1,789,118 - B158DRAFT_1713 0.79 -0.9
1,789,262 - +1.6
1,789,276 - +0.9
1,789,320 + -0.2
1,789,737 + B158DRAFT_1714 0.73 -0.3
1,789,737 + B158DRAFT_1714 0.73 +0.2
1,789,737 + B158DRAFT_1714 0.73 -0.2
1,789,745 - B158DRAFT_1714 0.74 -0.7
1,789,745 - B158DRAFT_1714 0.74 -0.4
1,789,745 - B158DRAFT_1714 0.74 +0.7
1,789,781 + B158DRAFT_1714 0.81 -0.0
1,789,789 - B158DRAFT_1714 0.82 -4.5
1,789,807 - B158DRAFT_1714 0.85 -0.2
1,789,850 + -0.6
1,789,873 - -0.1
1,790,087 - B158DRAFT_1715 0.28 -0.1
1,790,245 + B158DRAFT_1715 0.52 -0.0
1,790,277 - B158DRAFT_1715 0.57 +1.1
1,790,294 - B158DRAFT_1715 0.59 +0.2
1,790,311 + B158DRAFT_1715 0.62 -0.2
1,790,554 + +1.1
1,790,651 + -4.2
1,790,651 + +2.2
1,790,681 + B158DRAFT_1716 0.13 -0.3
1,790,744 + B158DRAFT_1716 0.20 -0.1
1,790,744 + B158DRAFT_1716 0.20 -0.9
1,790,744 + B158DRAFT_1716 0.20 +0.8
1,790,744 + B158DRAFT_1716 0.20 +0.4
1,790,744 + B158DRAFT_1716 0.20 -5.2
1,790,744 + B158DRAFT_1716 0.20 -0.2
1,790,744 + B158DRAFT_1716 0.20 -0.0
1,790,747 - B158DRAFT_1716 0.20 +0.7
1,790,747 - B158DRAFT_1716 0.20 -0.0
1,790,752 - B158DRAFT_1716 0.20 -5.9
1,790,752 - B158DRAFT_1716 0.20 +1.5
1,790,752 - B158DRAFT_1716 0.20 +0.5
1,790,752 - B158DRAFT_1716 0.20 +0.0
1,790,752 - B158DRAFT_1716 0.20 -2.0
1,790,752 - B158DRAFT_1716 0.20 +0.1
1,790,752 - B158DRAFT_1716 0.20 +1.1
1,790,752 - B158DRAFT_1716 0.20 -0.6
1,790,752 - B158DRAFT_1716 0.20 -0.5
1,790,752 - B158DRAFT_1716 0.20 -0.9
1,790,845 + B158DRAFT_1716 0.31 -3.4
1,790,845 + B158DRAFT_1716 0.31 -3.6

Or see this region's nucleotide sequence