Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1593

Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1591 and B158DRAFT_1592 are separated by 93 nucleotidesB158DRAFT_1592 and B158DRAFT_1593 are separated by 69 nucleotidesB158DRAFT_1593 and B158DRAFT_1594 are separated by 232 nucleotidesB158DRAFT_1594 and B158DRAFT_1595 are separated by 158 nucleotides B158DRAFT_1591: B158DRAFT_1591 - DNA internalization-related competence protein ComEC/Rec2, at 1,652,115 to 1,654,454 _1591 B158DRAFT_1592: B158DRAFT_1592 - hypothetical protein, at 1,654,548 to 1,655,108 _1592 B158DRAFT_1593: B158DRAFT_1593 - hypothetical protein, at 1,655,178 to 1,655,423 _1593 B158DRAFT_1594: B158DRAFT_1594 - hypothetical protein, at 1,655,656 to 1,655,871 _1594 B158DRAFT_1595: B158DRAFT_1595 - hypothetical protein, at 1,656,030 to 1,656,563 _1595 Position (kb) 1655 1656Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 1654.203 kb on - strand, within B158DRAFT_1591at 1654.209 kb on + strand, within B158DRAFT_1591at 1654.231 kb on - strandat 1654.244 kb on + strandat 1654.278 kb on + strandat 1654.286 kb on - strandat 1654.344 kb on + strandat 1654.358 kb on - strandat 1654.360 kb on + strandat 1654.360 kb on + strandat 1654.365 kb on + strandat 1654.365 kb on + strandat 1654.365 kb on + strandat 1654.368 kb on - strandat 1654.368 kb on - strandat 1654.373 kb on - strandat 1654.373 kb on - strandat 1654.373 kb on - strandat 1654.373 kb on - strandat 1654.373 kb on - strandat 1654.375 kb on + strandat 1654.383 kb on - strandat 1654.411 kb on + strandat 1654.416 kb on + strandat 1654.416 kb on - strandat 1654.419 kb on - strandat 1654.458 kb on + strandat 1654.458 kb on + strandat 1654.458 kb on + strandat 1654.519 kb on + strandat 1654.527 kb on - strandat 1654.539 kb on - strandat 1654.586 kb on - strandat 1654.610 kb on + strand, within B158DRAFT_1592at 1654.680 kb on + strand, within B158DRAFT_1592at 1654.680 kb on + strand, within B158DRAFT_1592at 1654.680 kb on + strand, within B158DRAFT_1592at 1654.680 kb on + strand, within B158DRAFT_1592at 1654.688 kb on - strand, within B158DRAFT_1592at 1654.688 kb on - strand, within B158DRAFT_1592at 1654.688 kb on - strand, within B158DRAFT_1592at 1654.688 kb on - strand, within B158DRAFT_1592at 1654.789 kb on - strand, within B158DRAFT_1592at 1654.832 kb on - strand, within B158DRAFT_1592at 1655.008 kb on - strand, within B158DRAFT_1592at 1655.151 kb on + strandat 1655.159 kb on - strandat 1655.163 kb on + strandat 1655.164 kb on - strandat 1655.168 kb on + strandat 1655.173 kb on + strandat 1655.258 kb on + strand, within B158DRAFT_1593at 1655.286 kb on + strand, within B158DRAFT_1593at 1655.333 kb on + strand, within B158DRAFT_1593at 1655.347 kb on + strand, within B158DRAFT_1593at 1655.350 kb on - strand, within B158DRAFT_1593at 1655.355 kb on - strand, within B158DRAFT_1593at 1655.355 kb on - strand, within B158DRAFT_1593at 1655.355 kb on - strand, within B158DRAFT_1593at 1655.378 kb on + strand, within B158DRAFT_1593at 1655.388 kb on + strand, within B158DRAFT_1593at 1655.389 kb on + strand, within B158DRAFT_1593at 1655.389 kb on + strand, within B158DRAFT_1593at 1655.396 kb on - strand, within B158DRAFT_1593at 1655.397 kb on - strand, within B158DRAFT_1593at 1655.477 kb on - strandat 1655.531 kb on + strandat 1655.548 kb on + strandat 1655.556 kb on - strandat 1655.606 kb on + strandat 1655.614 kb on - strandat 1655.762 kb on - strand, within B158DRAFT_1594at 1655.780 kb on + strand, within B158DRAFT_1594at 1655.790 kb on + strand, within B158DRAFT_1594at 1655.803 kb on - strand, within B158DRAFT_1594at 1655.859 kb on - strandat 1655.859 kb on - strandat 1656.032 kb on + strandat 1656.160 kb on + strand, within B158DRAFT_1595at 1656.291 kb on + strand, within B158DRAFT_1595at 1656.310 kb on - strand, within B158DRAFT_1595at 1656.384 kb on - strand, within B158DRAFT_1595at 1656.397 kb on + strand, within B158DRAFT_1595

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml
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1,654,203 - B158DRAFT_1591 0.89 +0.7
1,654,209 + B158DRAFT_1591 0.89 -2.6
1,654,231 - +0.7
1,654,244 + -4.2
1,654,278 + -0.4
1,654,286 - +0.3
1,654,344 + +1.0
1,654,358 - -0.8
1,654,360 + -0.5
1,654,360 + +0.3
1,654,365 + -0.5
1,654,365 + +1.1
1,654,365 + -3.8
1,654,368 - +0.3
1,654,368 - -1.6
1,654,373 - +0.7
1,654,373 - -0.5
1,654,373 - +0.9
1,654,373 - +0.1
1,654,373 - -0.6
1,654,375 + -0.2
1,654,383 - -3.1
1,654,411 + -3.5
1,654,416 + +0.1
1,654,416 - +0.2
1,654,419 - -4.4
1,654,458 + -0.4
1,654,458 + +0.0
1,654,458 + +0.5
1,654,519 + +0.2
1,654,527 - +0.5
1,654,539 - +0.9
1,654,586 - -0.9
1,654,610 + B158DRAFT_1592 0.11 -0.3
1,654,680 + B158DRAFT_1592 0.24 -1.1
1,654,680 + B158DRAFT_1592 0.24 -4.5
1,654,680 + B158DRAFT_1592 0.24 -1.0
1,654,680 + B158DRAFT_1592 0.24 -0.2
1,654,688 - B158DRAFT_1592 0.25 +0.4
1,654,688 - B158DRAFT_1592 0.25 -0.2
1,654,688 - B158DRAFT_1592 0.25 -2.4
1,654,688 - B158DRAFT_1592 0.25 +0.6
1,654,789 - B158DRAFT_1592 0.43 -0.5
1,654,832 - B158DRAFT_1592 0.51 -0.2
1,655,008 - B158DRAFT_1592 0.82 -0.6
1,655,151 + +0.4
1,655,159 - -1.0
1,655,163 + -0.9
1,655,164 - +0.3
1,655,168 + -5.0
1,655,173 + -0.3
1,655,258 + B158DRAFT_1593 0.33 +0.9
1,655,286 + B158DRAFT_1593 0.44 -0.4
1,655,333 + B158DRAFT_1593 0.63 +1.5
1,655,347 + B158DRAFT_1593 0.69 +0.9
1,655,350 - B158DRAFT_1593 0.70 +1.1
1,655,355 - B158DRAFT_1593 0.72 -0.9
1,655,355 - B158DRAFT_1593 0.72 +0.6
1,655,355 - B158DRAFT_1593 0.72 +0.4
1,655,378 + B158DRAFT_1593 0.81 +0.1
1,655,388 + B158DRAFT_1593 0.85 -0.3
1,655,389 + B158DRAFT_1593 0.86 -0.3
1,655,389 + B158DRAFT_1593 0.86 -1.0
1,655,396 - B158DRAFT_1593 0.89 +0.9
1,655,397 - B158DRAFT_1593 0.89 -0.4
1,655,477 - +0.1
1,655,531 + +0.3
1,655,548 + -0.2
1,655,556 - -0.1
1,655,606 + -0.2
1,655,614 - +2.4
1,655,762 - B158DRAFT_1594 0.49 -1.1
1,655,780 + B158DRAFT_1594 0.57 +0.7
1,655,790 + B158DRAFT_1594 0.62 +1.0
1,655,803 - B158DRAFT_1594 0.68 -0.6
1,655,859 - +0.7
1,655,859 - +0.5
1,656,032 + -0.1
1,656,160 + B158DRAFT_1595 0.24 -0.1
1,656,291 + B158DRAFT_1595 0.49 -1.1
1,656,310 - B158DRAFT_1595 0.52 -1.2
1,656,384 - B158DRAFT_1595 0.66 -3.4
1,656,397 + B158DRAFT_1595 0.69 -4.0

Or see this region's nucleotide sequence