Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1306 and B158DRAFT_1307 are separated by 9 nucleotides B158DRAFT_1307 and B158DRAFT_1308 are separated by 97 nucleotides
B158DRAFT_1306: B158DRAFT_1306 - Uncharacterized conserved protein, at 1,352,845 to 1,354,737
_1306
B158DRAFT_1307: B158DRAFT_1307 - GTP cyclohydrolase I, at 1,354,747 to 1,355,304
_1307
B158DRAFT_1308: B158DRAFT_1308 - 4-phosphoerythronate dehydrogenase (EC 1.1.1.290), at 1,355,402 to 1,356,487
_1308
Position (kb)
1354
1355
1356 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 1353.816 kb on + strand, within B158DRAFT_1306 at 1353.816 kb on + strand, within B158DRAFT_1306 at 1353.830 kb on - strand, within B158DRAFT_1306 at 1353.844 kb on + strand, within B158DRAFT_1306 at 1353.864 kb on - strand, within B158DRAFT_1306 at 1353.865 kb on + strand, within B158DRAFT_1306 at 1353.873 kb on - strand, within B158DRAFT_1306 at 1353.873 kb on - strand, within B158DRAFT_1306 at 1353.873 kb on - strand, within B158DRAFT_1306 at 1353.898 kb on - strand, within B158DRAFT_1306 at 1353.900 kb on + strand, within B158DRAFT_1306 at 1353.900 kb on + strand, within B158DRAFT_1306 at 1353.900 kb on + strand, within B158DRAFT_1306 at 1353.908 kb on - strand, within B158DRAFT_1306 at 1353.959 kb on + strand, within B158DRAFT_1306 at 1354.023 kb on + strand, within B158DRAFT_1306 at 1354.023 kb on + strand, within B158DRAFT_1306 at 1354.023 kb on + strand, within B158DRAFT_1306 at 1354.206 kb on + strand, within B158DRAFT_1306 at 1354.254 kb on + strand, within B158DRAFT_1306 at 1354.254 kb on + strand, within B158DRAFT_1306 at 1354.254 kb on + strand, within B158DRAFT_1306 at 1354.254 kb on + strand, within B158DRAFT_1306 at 1354.262 kb on - strand, within B158DRAFT_1306 at 1354.284 kb on + strand, within B158DRAFT_1306 at 1354.292 kb on + strand, within B158DRAFT_1306 at 1354.292 kb on + strand, within B158DRAFT_1306 at 1354.300 kb on - strand, within B158DRAFT_1306 at 1354.300 kb on - strand, within B158DRAFT_1306 at 1354.326 kb on - strand, within B158DRAFT_1306 at 1354.344 kb on + strand, within B158DRAFT_1306 at 1354.370 kb on - strand, within B158DRAFT_1306 at 1354.407 kb on + strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.431 kb on - strand, within B158DRAFT_1306 at 1354.451 kb on + strand, within B158DRAFT_1306 at 1354.464 kb on + strand, within B158DRAFT_1306 at 1354.472 kb on - strand, within B158DRAFT_1306 at 1354.640 kb on - strand at 1354.645 kb on + strand at 1354.653 kb on - strand at 1354.657 kb on + strand at 1354.672 kb on - strand at 1354.744 kb on + strand at 1355.325 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml remove 1,353,816 + B158DRAFT_1306 0.51 -0.0 1,353,816 + B158DRAFT_1306 0.51 -2.3 1,353,830 - B158DRAFT_1306 0.52 -2.6 1,353,844 + B158DRAFT_1306 0.53 -0.8 1,353,864 - B158DRAFT_1306 0.54 -1.6 1,353,865 + B158DRAFT_1306 0.54 -1.7 1,353,873 - B158DRAFT_1306 0.54 -0.5 1,353,873 - B158DRAFT_1306 0.54 +0.6 1,353,873 - B158DRAFT_1306 0.54 +0.5 1,353,898 - B158DRAFT_1306 0.56 +0.7 1,353,900 + B158DRAFT_1306 0.56 +0.0 1,353,900 + B158DRAFT_1306 0.56 +0.1 1,353,900 + B158DRAFT_1306 0.56 -0.4 1,353,908 - B158DRAFT_1306 0.56 +0.3 1,353,959 + B158DRAFT_1306 0.59 -3.4 1,354,023 + B158DRAFT_1306 0.62 -3.4 1,354,023 + B158DRAFT_1306 0.62 -1.5 1,354,023 + B158DRAFT_1306 0.62 -0.7 1,354,206 + B158DRAFT_1306 0.72 -1.1 1,354,254 + B158DRAFT_1306 0.74 -0.7 1,354,254 + B158DRAFT_1306 0.74 +0.3 1,354,254 + B158DRAFT_1306 0.74 +0.0 1,354,254 + B158DRAFT_1306 0.74 -4.3 1,354,262 - B158DRAFT_1306 0.75 -4.9 1,354,284 + B158DRAFT_1306 0.76 -0.3 1,354,292 + B158DRAFT_1306 0.76 -1.1 1,354,292 + B158DRAFT_1306 0.76 +1.5 1,354,300 - B158DRAFT_1306 0.77 +1.8 1,354,300 - B158DRAFT_1306 0.77 -3.2 1,354,326 - B158DRAFT_1306 0.78 +0.5 1,354,344 + B158DRAFT_1306 0.79 +0.5 1,354,370 - B158DRAFT_1306 0.81 +1.5 1,354,407 + B158DRAFT_1306 0.83 -0.2 1,354,415 - B158DRAFT_1306 0.83 -4.9 1,354,415 - B158DRAFT_1306 0.83 -1.7 1,354,415 - B158DRAFT_1306 0.83 -1.8 1,354,415 - B158DRAFT_1306 0.83 +0.0 1,354,415 - B158DRAFT_1306 0.83 +0.0 1,354,415 - B158DRAFT_1306 0.83 -0.1 1,354,431 - B158DRAFT_1306 0.84 -2.8 1,354,451 + B158DRAFT_1306 0.85 -0.2 1,354,464 + B158DRAFT_1306 0.86 +0.3 1,354,472 - B158DRAFT_1306 0.86 -3.0 1,354,640 - +1.5 1,354,645 + -0.2 1,354,653 - -0.2 1,354,657 + +0.3 1,354,672 - -0.9 1,354,744 + +0.8 1,355,325 - -4.6
Or see this region's nucleotide sequence