Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1228 and B158DRAFT_1229 are separated by 72 nucleotides B158DRAFT_1229 and B158DRAFT_1230 are separated by 1 nucleotides B158DRAFT_1230 and B158DRAFT_1231 are separated by 56 nucleotides B158DRAFT_1231 and B158DRAFT_1232 are separated by 250 nucleotides
B158DRAFT_1228: B158DRAFT_1228 - monothiol glutaredoxin, Grx4 family, at 1,268,123 to 1,268,452
_1228
B158DRAFT_1229: B158DRAFT_1229 - Uncharacterized conserved protein, at 1,268,525 to 1,269,235
_1229
B158DRAFT_1230: B158DRAFT_1230 - Glycerophosphoryl diester phosphodiesterase, at 1,269,237 to 1,269,917
_1230
B158DRAFT_1231: B158DRAFT_1231 - bacterioferritin, at 1,269,974 to 1,270,453
_1231
B158DRAFT_1232: B158DRAFT_1232 - Bacterioferritin-associated ferredoxin, at 1,270,704 to 1,270,934
_1232
Position (kb)
1269
1270 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 1268.286 kb on + strand, within B158DRAFT_1228 at 1268.341 kb on + strand, within B158DRAFT_1228 at 1268.341 kb on + strand, within B158DRAFT_1228 at 1268.341 kb on + strand, within B158DRAFT_1228 at 1268.341 kb on + strand, within B158DRAFT_1228 at 1268.349 kb on - strand, within B158DRAFT_1228 at 1268.391 kb on + strand, within B158DRAFT_1228 at 1268.409 kb on - strand, within B158DRAFT_1228 at 1268.417 kb on + strand, within B158DRAFT_1228 at 1268.447 kb on + strand at 1268.481 kb on - strand at 1268.531 kb on - strand at 1268.647 kb on - strand, within B158DRAFT_1229 at 1268.673 kb on + strand, within B158DRAFT_1229 at 1268.728 kb on + strand, within B158DRAFT_1229 at 1268.731 kb on - strand, within B158DRAFT_1229 at 1268.866 kb on + strand, within B158DRAFT_1229 at 1268.881 kb on + strand, within B158DRAFT_1229 at 1268.901 kb on + strand, within B158DRAFT_1229 at 1268.942 kb on - strand, within B158DRAFT_1229 at 1268.942 kb on - strand, within B158DRAFT_1229 at 1268.964 kb on - strand, within B158DRAFT_1229 at 1269.053 kb on - strand, within B158DRAFT_1229 at 1269.225 kb on + strand at 1269.233 kb on - strand at 1269.243 kb on + strand at 1269.243 kb on - strand at 1269.267 kb on + strand at 1269.269 kb on - strand at 1269.276 kb on + strand at 1269.276 kb on + strand at 1269.284 kb on - strand at 1269.288 kb on + strand at 1269.306 kb on + strand, within B158DRAFT_1230 at 1269.306 kb on + strand, within B158DRAFT_1230 at 1269.307 kb on + strand, within B158DRAFT_1230 at 1269.334 kb on + strand, within B158DRAFT_1230 at 1269.419 kb on - strand, within B158DRAFT_1230 at 1269.432 kb on + strand, within B158DRAFT_1230 at 1269.448 kb on - strand, within B158DRAFT_1230 at 1269.468 kb on + strand, within B158DRAFT_1230 at 1269.473 kb on + strand, within B158DRAFT_1230 at 1269.476 kb on - strand, within B158DRAFT_1230 at 1269.533 kb on + strand, within B158DRAFT_1230 at 1269.542 kb on + strand, within B158DRAFT_1230 at 1269.701 kb on + strand, within B158DRAFT_1230 at 1269.701 kb on + strand, within B158DRAFT_1230 at 1269.719 kb on - strand, within B158DRAFT_1230 at 1269.719 kb on - strand, within B158DRAFT_1230 at 1269.736 kb on - strand, within B158DRAFT_1230 at 1269.757 kb on + strand, within B158DRAFT_1230 at 1269.762 kb on + strand, within B158DRAFT_1230 at 1269.762 kb on + strand, within B158DRAFT_1230 at 1269.765 kb on - strand, within B158DRAFT_1230 at 1269.770 kb on - strand, within B158DRAFT_1230 at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.901 kb on + strand at 1269.909 kb on - strand at 1269.909 kb on - strand at 1269.910 kb on - strand at 1269.910 kb on - strand at 1269.939 kb on + strand at 1269.939 kb on + strand at 1269.939 kb on + strand at 1269.939 kb on + strand at 1269.939 kb on + strand at 1269.939 kb on + strand at 1269.947 kb on - strand at 1269.947 kb on - strand at 1269.952 kb on - strand at 1269.952 kb on - strand at 1270.099 kb on + strand, within B158DRAFT_1231 at 1270.099 kb on + strand, within B158DRAFT_1231 at 1270.107 kb on - strand, within B158DRAFT_1231 at 1270.107 kb on - strand, within B158DRAFT_1231 at 1270.135 kb on + strand, within B158DRAFT_1231 at 1270.135 kb on + strand, within B158DRAFT_1231 at 1270.135 kb on + strand, within B158DRAFT_1231 at 1270.135 kb on + strand, within B158DRAFT_1231 at 1270.141 kb on - strand, within B158DRAFT_1231 at 1270.143 kb on - strand, within B158DRAFT_1231 at 1270.215 kb on + strand, within B158DRAFT_1231 at 1270.237 kb on - strand, within B158DRAFT_1231 at 1270.347 kb on - strand, within B158DRAFT_1231 at 1270.414 kb on - strand at 1270.496 kb on + strand at 1270.524 kb on - strand at 1270.524 kb on - strand at 1270.711 kb on + strand at 1270.737 kb on + strand, within B158DRAFT_1232 at 1270.745 kb on - strand, within B158DRAFT_1232 at 1270.754 kb on - strand, within B158DRAFT_1232 at 1270.763 kb on + strand, within B158DRAFT_1232 at 1270.766 kb on - strand, within B158DRAFT_1232 at 1270.849 kb on - strand, within B158DRAFT_1232 at 1270.875 kb on + strand, within B158DRAFT_1232 at 1270.875 kb on + strand, within B158DRAFT_1232 at 1270.883 kb on - strand, within B158DRAFT_1232 at 1270.883 kb on - strand, within B158DRAFT_1232 at 1270.883 kb on - strand, within B158DRAFT_1232 at 1270.883 kb on - strand, within B158DRAFT_1232 at 1270.883 kb on - strand, within B158DRAFT_1232 at 1270.883 kb on - strand, within B158DRAFT_1232 at 1270.883 kb on - strand, within B158DRAFT_1232 at 1270.906 kb on + strand, within B158DRAFT_1232
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml remove 1,268,286 + B158DRAFT_1228 0.49 -2.2 1,268,341 + B158DRAFT_1228 0.66 -4.4 1,268,341 + B158DRAFT_1228 0.66 -0.7 1,268,341 + B158DRAFT_1228 0.66 -1.7 1,268,341 + B158DRAFT_1228 0.66 -0.3 1,268,349 - B158DRAFT_1228 0.68 -2.6 1,268,391 + B158DRAFT_1228 0.81 -3.5 1,268,409 - B158DRAFT_1228 0.87 -4.0 1,268,417 + B158DRAFT_1228 0.89 -2.7 1,268,447 + +1.1 1,268,481 - +1.4 1,268,531 - -1.6 1,268,647 - B158DRAFT_1229 0.17 -0.0 1,268,673 + B158DRAFT_1229 0.21 -1.0 1,268,728 + B158DRAFT_1229 0.29 +0.6 1,268,731 - B158DRAFT_1229 0.29 -4.7 1,268,866 + B158DRAFT_1229 0.48 -0.8 1,268,881 + B158DRAFT_1229 0.50 -0.2 1,268,901 + B158DRAFT_1229 0.53 -0.2 1,268,942 - B158DRAFT_1229 0.59 +0.3 1,268,942 - B158DRAFT_1229 0.59 -3.4 1,268,964 - B158DRAFT_1229 0.62 +0.3 1,269,053 - B158DRAFT_1229 0.74 +0.9 1,269,225 + -0.2 1,269,233 - +0.0 1,269,243 + -0.4 1,269,243 - +0.6 1,269,267 + +0.9 1,269,269 - -0.2 1,269,276 + +0.7 1,269,276 + -1.6 1,269,284 - -0.3 1,269,288 + -0.5 1,269,306 + B158DRAFT_1230 0.10 +0.4 1,269,306 + B158DRAFT_1230 0.10 +1.1 1,269,307 + B158DRAFT_1230 0.10 +0.4 1,269,334 + B158DRAFT_1230 0.14 -0.2 1,269,419 - B158DRAFT_1230 0.27 +0.3 1,269,432 + B158DRAFT_1230 0.29 -1.1 1,269,448 - B158DRAFT_1230 0.31 -1.7 1,269,468 + B158DRAFT_1230 0.34 +0.7 1,269,473 + B158DRAFT_1230 0.35 -0.5 1,269,476 - B158DRAFT_1230 0.35 +1.3 1,269,533 + B158DRAFT_1230 0.43 -4.7 1,269,542 + B158DRAFT_1230 0.45 +0.1 1,269,701 + B158DRAFT_1230 0.68 +0.3 1,269,701 + B158DRAFT_1230 0.68 -1.3 1,269,719 - B158DRAFT_1230 0.71 -0.9 1,269,719 - B158DRAFT_1230 0.71 -0.3 1,269,736 - B158DRAFT_1230 0.73 +0.2 1,269,757 + B158DRAFT_1230 0.76 +0.1 1,269,762 + B158DRAFT_1230 0.77 -1.8 1,269,762 + B158DRAFT_1230 0.77 +0.7 1,269,765 - B158DRAFT_1230 0.78 -0.4 1,269,770 - B158DRAFT_1230 0.78 +0.3 1,269,854 + +0.7 1,269,854 + -1.3 1,269,854 + -1.1 1,269,854 + +0.9 1,269,854 + -3.3 1,269,854 + -3.5 1,269,854 + +0.5 1,269,854 + -0.1 1,269,854 + +1.7 1,269,854 + +1.8 1,269,854 + -4.6 1,269,854 + -1.6 1,269,854 + -4.1 1,269,854 + -0.2 1,269,854 + +1.1 1,269,854 + +0.1 1,269,862 - -0.4 1,269,862 - +2.4 1,269,862 - +0.5 1,269,862 - -3.1 1,269,862 - +0.3 1,269,862 - -1.6 1,269,862 - -2.0 1,269,862 - +0.3 1,269,862 - +0.4 1,269,862 - -0.7 1,269,862 - +0.8 1,269,862 - +0.5 1,269,862 - -2.3 1,269,901 + -0.1 1,269,909 - -0.9 1,269,909 - +0.3 1,269,910 - +0.1 1,269,910 - -0.2 1,269,939 + -1.0 1,269,939 + +0.4 1,269,939 + -3.6 1,269,939 + -0.1 1,269,939 + +0.5 1,269,939 + -2.7 1,269,947 - -1.1 1,269,947 - +0.9 1,269,952 - -1.0 1,269,952 - +0.8 1,270,099 + B158DRAFT_1231 0.26 -2.3 1,270,099 + B158DRAFT_1231 0.26 -2.7 1,270,107 - B158DRAFT_1231 0.28 -0.9 1,270,107 - B158DRAFT_1231 0.28 +1.3 1,270,135 + B158DRAFT_1231 0.34 -0.6 1,270,135 + B158DRAFT_1231 0.34 +0.4 1,270,135 + B158DRAFT_1231 0.34 -0.1 1,270,135 + B158DRAFT_1231 0.34 -0.3 1,270,141 - B158DRAFT_1231 0.35 -3.2 1,270,143 - B158DRAFT_1231 0.35 +0.2 1,270,215 + B158DRAFT_1231 0.50 -5.3 1,270,237 - B158DRAFT_1231 0.55 +1.6 1,270,347 - B158DRAFT_1231 0.78 -0.0 1,270,414 - +0.5 1,270,496 + -2.7 1,270,524 - -2.6 1,270,524 - -0.4 1,270,711 + -0.2 1,270,737 + B158DRAFT_1232 0.14 -0.0 1,270,745 - B158DRAFT_1232 0.18 -0.5 1,270,754 - B158DRAFT_1232 0.22 +0.2 1,270,763 + B158DRAFT_1232 0.26 -2.7 1,270,766 - B158DRAFT_1232 0.27 -0.2 1,270,849 - B158DRAFT_1232 0.63 -0.9 1,270,875 + B158DRAFT_1232 0.74 -0.1 1,270,875 + B158DRAFT_1232 0.74 -0.2 1,270,883 - B158DRAFT_1232 0.77 -1.1 1,270,883 - B158DRAFT_1232 0.77 -3.1 1,270,883 - B158DRAFT_1232 0.77 -1.7 1,270,883 - B158DRAFT_1232 0.77 -4.9 1,270,883 - B158DRAFT_1232 0.77 -0.6 1,270,883 - B158DRAFT_1232 0.77 +0.5 1,270,883 - B158DRAFT_1232 0.77 -5.0 1,270,906 + B158DRAFT_1232 0.87 -0.4
Or see this region's nucleotide sequence