Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1227 and B158DRAFT_1228 are separated by 212 nucleotides B158DRAFT_1228 and B158DRAFT_1229 are separated by 72 nucleotides B158DRAFT_1229 and B158DRAFT_1230 are separated by 1 nucleotides
B158DRAFT_1227: B158DRAFT_1227 - ABC-type spermidine/putrescine transport systems, ATPase components, at 1,266,840 to 1,267,910
_1227
B158DRAFT_1228: B158DRAFT_1228 - monothiol glutaredoxin, Grx4 family, at 1,268,123 to 1,268,452
_1228
B158DRAFT_1229: B158DRAFT_1229 - Uncharacterized conserved protein, at 1,268,525 to 1,269,235
_1229
B158DRAFT_1230: B158DRAFT_1230 - Glycerophosphoryl diester phosphodiesterase, at 1,269,237 to 1,269,917
_1230
Position (kb) 1268
1269 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 1268.002 kb on - strand at 1268.048 kb on - strand at 1268.133 kb on + strand at 1268.141 kb on - strand at 1268.172 kb on - strand, within B158DRAFT_1228 at 1268.286 kb on + strand, within B158DRAFT_1228 at 1268.341 kb on + strand, within B158DRAFT_1228 at 1268.341 kb on + strand, within B158DRAFT_1228 at 1268.341 kb on + strand, within B158DRAFT_1228 at 1268.341 kb on + strand, within B158DRAFT_1228 at 1268.349 kb on - strand, within B158DRAFT_1228 at 1268.391 kb on + strand, within B158DRAFT_1228 at 1268.409 kb on - strand, within B158DRAFT_1228 at 1268.417 kb on + strand, within B158DRAFT_1228 at 1268.447 kb on + strand at 1268.481 kb on - strand at 1268.531 kb on - strand at 1268.647 kb on - strand, within B158DRAFT_1229 at 1268.673 kb on + strand, within B158DRAFT_1229 at 1268.728 kb on + strand, within B158DRAFT_1229 at 1268.731 kb on - strand, within B158DRAFT_1229 at 1268.866 kb on + strand, within B158DRAFT_1229 at 1268.881 kb on + strand, within B158DRAFT_1229 at 1268.901 kb on + strand, within B158DRAFT_1229 at 1268.942 kb on - strand, within B158DRAFT_1229 at 1268.942 kb on - strand, within B158DRAFT_1229 at 1268.964 kb on - strand, within B158DRAFT_1229 at 1269.053 kb on - strand, within B158DRAFT_1229 at 1269.225 kb on + strand at 1269.233 kb on - strand at 1269.243 kb on + strand at 1269.243 kb on - strand at 1269.267 kb on + strand at 1269.269 kb on - strand at 1269.276 kb on + strand at 1269.276 kb on + strand at 1269.284 kb on - strand at 1269.288 kb on + strand at 1269.306 kb on + strand, within B158DRAFT_1230 at 1269.306 kb on + strand, within B158DRAFT_1230 at 1269.307 kb on + strand, within B158DRAFT_1230 at 1269.334 kb on + strand, within B158DRAFT_1230 at 1269.419 kb on - strand, within B158DRAFT_1230 at 1269.432 kb on + strand, within B158DRAFT_1230 at 1269.448 kb on - strand, within B158DRAFT_1230
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml remove 1,268,002 - -1.0 1,268,048 - -0.5 1,268,133 + -0.5 1,268,141 - +0.4 1,268,172 - B158DRAFT_1228 0.15 +0.4 1,268,286 + B158DRAFT_1228 0.49 -2.2 1,268,341 + B158DRAFT_1228 0.66 -4.4 1,268,341 + B158DRAFT_1228 0.66 -0.7 1,268,341 + B158DRAFT_1228 0.66 -1.7 1,268,341 + B158DRAFT_1228 0.66 -0.3 1,268,349 - B158DRAFT_1228 0.68 -2.6 1,268,391 + B158DRAFT_1228 0.81 -3.5 1,268,409 - B158DRAFT_1228 0.87 -4.0 1,268,417 + B158DRAFT_1228 0.89 -2.7 1,268,447 + +1.1 1,268,481 - +1.4 1,268,531 - -1.6 1,268,647 - B158DRAFT_1229 0.17 -0.0 1,268,673 + B158DRAFT_1229 0.21 -1.0 1,268,728 + B158DRAFT_1229 0.29 +0.6 1,268,731 - B158DRAFT_1229 0.29 -4.7 1,268,866 + B158DRAFT_1229 0.48 -0.8 1,268,881 + B158DRAFT_1229 0.50 -0.2 1,268,901 + B158DRAFT_1229 0.53 -0.2 1,268,942 - B158DRAFT_1229 0.59 +0.3 1,268,942 - B158DRAFT_1229 0.59 -3.4 1,268,964 - B158DRAFT_1229 0.62 +0.3 1,269,053 - B158DRAFT_1229 0.74 +0.9 1,269,225 + -0.2 1,269,233 - +0.0 1,269,243 + -0.4 1,269,243 - +0.6 1,269,267 + +0.9 1,269,269 - -0.2 1,269,276 + +0.7 1,269,276 + -1.6 1,269,284 - -0.3 1,269,288 + -0.5 1,269,306 + B158DRAFT_1230 0.10 +0.4 1,269,306 + B158DRAFT_1230 0.10 +1.1 1,269,307 + B158DRAFT_1230 0.10 +0.4 1,269,334 + B158DRAFT_1230 0.14 -0.2 1,269,419 - B158DRAFT_1230 0.27 +0.3 1,269,432 + B158DRAFT_1230 0.29 -1.1 1,269,448 - B158DRAFT_1230 0.31 -1.7
Or see this region's nucleotide sequence