Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1117 and B158DRAFT_1118 are separated by 154 nucleotides B158DRAFT_1118 and B158DRAFT_1119 are separated by 80 nucleotides
B158DRAFT_1117: B158DRAFT_1117 - prolyl-tRNA synthetase (EC 6.1.1.15), at 1,153,873 to 1,155,588
_1117
B158DRAFT_1118: B158DRAFT_1118 - hypothetical protein, at 1,155,743 to 1,155,982
_1118
B158DRAFT_1119: B158DRAFT_1119 - Predicted metal-dependent hydrolase with the TIM-barrel fold, at 1,156,063 to 1,157,712
_1119
Position (kb)
1155
1156 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1155.650 kb on - strand at 1155.730 kb on - strand at 1155.799 kb on + strand, within B158DRAFT_1118 at 1155.799 kb on + strand, within B158DRAFT_1118 at 1155.799 kb on + strand, within B158DRAFT_1118 at 1155.804 kb on + strand, within B158DRAFT_1118 at 1155.807 kb on - strand, within B158DRAFT_1118 at 1155.916 kb on + strand, within B158DRAFT_1118 at 1155.916 kb on + strand, within B158DRAFT_1118 at 1155.916 kb on + strand, within B158DRAFT_1118 at 1155.922 kb on - strand, within B158DRAFT_1118 at 1155.924 kb on - strand, within B158DRAFT_1118 at 1155.939 kb on + strand, within B158DRAFT_1118 at 1155.939 kb on + strand, within B158DRAFT_1118 at 1155.959 kb on - strand at 1156.035 kb on - strand at 1156.061 kb on + strand at 1156.066 kb on + strand at 1156.074 kb on - strand at 1156.109 kb on + strand at 1156.117 kb on - strand at 1156.164 kb on - strand at 1156.187 kb on + strand at 1156.192 kb on + strand at 1156.209 kb on + strand at 1156.209 kb on + strand at 1156.214 kb on + strand at 1156.217 kb on - strand at 1156.222 kb on - strand at 1156.300 kb on - strand, within B158DRAFT_1119 at 1156.306 kb on + strand, within B158DRAFT_1119 at 1156.315 kb on + strand, within B158DRAFT_1119 at 1156.315 kb on + strand, within B158DRAFT_1119 at 1156.323 kb on - strand, within B158DRAFT_1119 at 1156.323 kb on - strand, within B158DRAFT_1119 at 1156.364 kb on - strand, within B158DRAFT_1119 at 1156.366 kb on + strand, within B158DRAFT_1119 at 1156.366 kb on + strand, within B158DRAFT_1119 at 1156.366 kb on + strand, within B158DRAFT_1119 at 1156.374 kb on - strand, within B158DRAFT_1119 at 1156.454 kb on - strand, within B158DRAFT_1119 at 1156.457 kb on + strand, within B158DRAFT_1119 at 1156.557 kb on + strand, within B158DRAFT_1119 at 1156.586 kb on - strand, within B158DRAFT_1119 at 1156.623 kb on - strand, within B158DRAFT_1119 at 1156.746 kb on + strand, within B158DRAFT_1119 at 1156.746 kb on + strand, within B158DRAFT_1119 at 1156.754 kb on - strand, within B158DRAFT_1119 at 1156.754 kb on - strand, within B158DRAFT_1119 at 1156.770 kb on - strand, within B158DRAFT_1119 at 1156.806 kb on + strand, within B158DRAFT_1119 at 1156.844 kb on - strand, within B158DRAFT_1119 at 1156.870 kb on - strand, within B158DRAFT_1119 at 1156.930 kb on - strand, within B158DRAFT_1119 at 1156.944 kb on + strand, within B158DRAFT_1119 at 1156.944 kb on + strand, within B158DRAFT_1119 at 1156.952 kb on - strand, within B158DRAFT_1119 at 1156.952 kb on - strand, within B158DRAFT_1119 at 1156.952 kb on - strand, within B158DRAFT_1119 at 1156.952 kb on - strand, within B158DRAFT_1119 at 1156.952 kb on - strand, within B158DRAFT_1119 at 1156.952 kb on - strand, within B158DRAFT_1119 at 1156.952 kb on - strand, within B158DRAFT_1119
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml remove 1,155,650 - -1.9 1,155,730 - -0.1 1,155,799 + B158DRAFT_1118 0.23 -0.3 1,155,799 + B158DRAFT_1118 0.23 -0.2 1,155,799 + B158DRAFT_1118 0.23 -0.0 1,155,804 + B158DRAFT_1118 0.25 -1.7 1,155,807 - B158DRAFT_1118 0.27 -0.2 1,155,916 + B158DRAFT_1118 0.72 -4.7 1,155,916 + B158DRAFT_1118 0.72 -0.7 1,155,916 + B158DRAFT_1118 0.72 -0.7 1,155,922 - B158DRAFT_1118 0.75 -0.5 1,155,924 - B158DRAFT_1118 0.75 -0.5 1,155,939 + B158DRAFT_1118 0.82 -0.3 1,155,939 + B158DRAFT_1118 0.82 +0.4 1,155,959 - -0.0 1,156,035 - +1.7 1,156,061 + -0.2 1,156,066 + +0.9 1,156,074 - +0.6 1,156,109 + +0.9 1,156,117 - +0.5 1,156,164 - +1.3 1,156,187 + -4.7 1,156,192 + -4.3 1,156,209 + +0.3 1,156,209 + -1.2 1,156,214 + -1.1 1,156,217 - -4.5 1,156,222 - -0.3 1,156,300 - B158DRAFT_1119 0.14 -0.9 1,156,306 + B158DRAFT_1119 0.15 -1.1 1,156,315 + B158DRAFT_1119 0.15 -3.6 1,156,315 + B158DRAFT_1119 0.15 +0.9 1,156,323 - B158DRAFT_1119 0.16 -3.2 1,156,323 - B158DRAFT_1119 0.16 -0.1 1,156,364 - B158DRAFT_1119 0.18 -3.0 1,156,366 + B158DRAFT_1119 0.18 -0.3 1,156,366 + B158DRAFT_1119 0.18 +0.6 1,156,366 + B158DRAFT_1119 0.18 +0.2 1,156,374 - B158DRAFT_1119 0.19 -0.2 1,156,454 - B158DRAFT_1119 0.24 +0.1 1,156,457 + B158DRAFT_1119 0.24 +1.1 1,156,557 + B158DRAFT_1119 0.30 +0.3 1,156,586 - B158DRAFT_1119 0.32 -0.1 1,156,623 - B158DRAFT_1119 0.34 +0.2 1,156,746 + B158DRAFT_1119 0.41 -1.0 1,156,746 + B158DRAFT_1119 0.41 -0.6 1,156,754 - B158DRAFT_1119 0.42 +0.5 1,156,754 - B158DRAFT_1119 0.42 +1.0 1,156,770 - B158DRAFT_1119 0.43 +1.1 1,156,806 + B158DRAFT_1119 0.45 -0.7 1,156,844 - B158DRAFT_1119 0.47 -0.6 1,156,870 - B158DRAFT_1119 0.49 -0.7 1,156,930 - B158DRAFT_1119 0.53 -3.5 1,156,944 + B158DRAFT_1119 0.53 -1.0 1,156,944 + B158DRAFT_1119 0.53 +0.7 1,156,952 - B158DRAFT_1119 0.54 +1.1 1,156,952 - B158DRAFT_1119 0.54 -0.7 1,156,952 - B158DRAFT_1119 0.54 -3.6 1,156,952 - B158DRAFT_1119 0.54 -0.1 1,156,952 - B158DRAFT_1119 0.54 -0.2 1,156,952 - B158DRAFT_1119 0.54 -3.4 1,156,952 - B158DRAFT_1119 0.54 -0.3
Or see this region's nucleotide sequence