Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0839

Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0838 and B158DRAFT_0839 are separated by 66 nucleotidesB158DRAFT_0839 and B158DRAFT_0840 are separated by 70 nucleotides B158DRAFT_0838: B158DRAFT_0838 - Predicted Zn-dependent peptidases, at 848,587 to 851,451 _0838 B158DRAFT_0839: B158DRAFT_0839 - NOL1/NOP2/sun family putative RNA methylase, at 851,518 to 852,984 _0839 B158DRAFT_0840: B158DRAFT_0840 - L-proline dehydrogenase (EC 1.5.99.8)/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12), at 853,055 to 856,213 _0840 Position (kb) 851 852 853Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 850.560 kb on + strand, within B158DRAFT_0838at 850.657 kb on + strand, within B158DRAFT_0838at 850.665 kb on - strand, within B158DRAFT_0838at 850.690 kb on - strand, within B158DRAFT_0838at 850.755 kb on + strand, within B158DRAFT_0838at 850.793 kb on + strand, within B158DRAFT_0838at 850.793 kb on + strand, within B158DRAFT_0838at 850.793 kb on + strand, within B158DRAFT_0838at 850.793 kb on + strand, within B158DRAFT_0838at 850.793 kb on + strand, within B158DRAFT_0838at 850.801 kb on - strand, within B158DRAFT_0838at 850.801 kb on - strand, within B158DRAFT_0838at 850.801 kb on - strand, within B158DRAFT_0838at 850.901 kb on - strand, within B158DRAFT_0838at 850.902 kb on + strand, within B158DRAFT_0838at 850.908 kb on + strand, within B158DRAFT_0838at 850.909 kb on + strand, within B158DRAFT_0838at 850.910 kb on + strand, within B158DRAFT_0838at 850.911 kb on - strand, within B158DRAFT_0838at 850.916 kb on - strand, within B158DRAFT_0838at 850.917 kb on - strand, within B158DRAFT_0838at 850.917 kb on - strand, within B158DRAFT_0838at 850.947 kb on - strand, within B158DRAFT_0838at 850.949 kb on - strand, within B158DRAFT_0838at 850.988 kb on + strand, within B158DRAFT_0838at 851.115 kb on + strand, within B158DRAFT_0838at 851.132 kb on + strand, within B158DRAFT_0838at 851.204 kb on - strandat 851.204 kb on - strandat 851.535 kb on + strandat 851.558 kb on - strandat 851.606 kb on + strandat 851.606 kb on + strandat 851.807 kb on - strand, within B158DRAFT_0839at 851.807 kb on - strand, within B158DRAFT_0839at 851.807 kb on - strand, within B158DRAFT_0839at 851.827 kb on - strand, within B158DRAFT_0839at 851.827 kb on - strand, within B158DRAFT_0839at 851.849 kb on - strand, within B158DRAFT_0839at 851.850 kb on - strand, within B158DRAFT_0839at 851.917 kb on + strand, within B158DRAFT_0839at 851.917 kb on + strand, within B158DRAFT_0839at 851.922 kb on + strand, within B158DRAFT_0839at 851.922 kb on + strand, within B158DRAFT_0839at 851.922 kb on + strand, within B158DRAFT_0839at 851.922 kb on + strand, within B158DRAFT_0839at 851.922 kb on + strand, within B158DRAFT_0839at 851.925 kb on - strand, within B158DRAFT_0839at 851.927 kb on + strand, within B158DRAFT_0839at 851.927 kb on + strand, within B158DRAFT_0839at 851.927 kb on + strand, within B158DRAFT_0839at 851.927 kb on + strand, within B158DRAFT_0839at 851.927 kb on + strand, within B158DRAFT_0839at 851.927 kb on + strand, within B158DRAFT_0839at 851.927 kb on + strand, within B158DRAFT_0839at 851.930 kb on - strand, within B158DRAFT_0839at 851.930 kb on - strand, within B158DRAFT_0839at 851.930 kb on - strand, within B158DRAFT_0839at 851.930 kb on - strand, within B158DRAFT_0839at 851.930 kb on - strand, within B158DRAFT_0839at 851.930 kb on - strand, within B158DRAFT_0839at 851.930 kb on - strand, within B158DRAFT_0839at 851.930 kb on - strand, within B158DRAFT_0839at 851.930 kb on - strand, within B158DRAFT_0839at 851.930 kb on - strand, within B158DRAFT_0839at 851.935 kb on - strand, within B158DRAFT_0839at 851.935 kb on - strand, within B158DRAFT_0839at 851.935 kb on - strand, within B158DRAFT_0839at 851.937 kb on - strand, within B158DRAFT_0839at 852.083 kb on + strand, within B158DRAFT_0839at 852.083 kb on + strand, within B158DRAFT_0839at 852.095 kb on + strand, within B158DRAFT_0839at 852.095 kb on + strand, within B158DRAFT_0839at 852.103 kb on - strand, within B158DRAFT_0839at 852.155 kb on + strand, within B158DRAFT_0839at 852.186 kb on + strand, within B158DRAFT_0839at 852.212 kb on + strand, within B158DRAFT_0839at 852.220 kb on - strand, within B158DRAFT_0839at 852.222 kb on + strand, within B158DRAFT_0839at 852.222 kb on + strand, within B158DRAFT_0839at 852.233 kb on + strand, within B158DRAFT_0839at 852.233 kb on + strand, within B158DRAFT_0839at 852.233 kb on + strand, within B158DRAFT_0839at 852.233 kb on + strand, within B158DRAFT_0839at 852.233 kb on + strand, within B158DRAFT_0839at 852.241 kb on - strand, within B158DRAFT_0839at 852.241 kb on - strand, within B158DRAFT_0839at 852.241 kb on - strand, within B158DRAFT_0839at 852.245 kb on - strand, within B158DRAFT_0839at 852.256 kb on + strand, within B158DRAFT_0839at 852.271 kb on - strand, within B158DRAFT_0839at 852.297 kb on + strand, within B158DRAFT_0839at 852.305 kb on - strand, within B158DRAFT_0839at 852.307 kb on + strand, within B158DRAFT_0839at 852.307 kb on + strand, within B158DRAFT_0839at 852.307 kb on + strand, within B158DRAFT_0839at 852.315 kb on - strand, within B158DRAFT_0839at 852.352 kb on - strand, within B158DRAFT_0839at 852.364 kb on + strand, within B158DRAFT_0839at 852.390 kb on + strand, within B158DRAFT_0839at 852.406 kb on + strand, within B158DRAFT_0839at 852.406 kb on + strand, within B158DRAFT_0839at 852.414 kb on - strand, within B158DRAFT_0839at 852.458 kb on + strand, within B158DRAFT_0839at 852.505 kb on - strand, within B158DRAFT_0839at 852.505 kb on - strand, within B158DRAFT_0839at 852.505 kb on - strand, within B158DRAFT_0839at 852.519 kb on - strand, within B158DRAFT_0839at 852.527 kb on + strand, within B158DRAFT_0839at 852.539 kb on + strand, within B158DRAFT_0839at 852.620 kb on + strand, within B158DRAFT_0839at 852.741 kb on - strand, within B158DRAFT_0839at 852.825 kb on - strand, within B158DRAFT_0839at 852.870 kb on + strandat 852.885 kb on - strandat 852.966 kb on + strandat 852.968 kb on + strandat 852.974 kb on + strandat 852.999 kb on - strandat 853.101 kb on - strandat 853.159 kb on + strandat 853.170 kb on + strandat 853.176 kb on + strandat 853.178 kb on - strandat 853.181 kb on + strandat 853.232 kb on - strandat 853.242 kb on + strandat 853.244 kb on - strandat 853.244 kb on - strandat 853.247 kb on + strandat 853.247 kb on + strandat 853.247 kb on + strandat 853.315 kb on + strandat 853.347 kb on + strandat 853.454 kb on + strand, within B158DRAFT_0840at 853.465 kb on + strand, within B158DRAFT_0840at 853.614 kb on - strand, within B158DRAFT_0840at 853.614 kb on - strand, within B158DRAFT_0840at 853.614 kb on - strand, within B158DRAFT_0840at 853.679 kb on + strand, within B158DRAFT_0840at 853.684 kb on + strand, within B158DRAFT_0840at 853.684 kb on + strand, within B158DRAFT_0840at 853.684 kb on + strand, within B158DRAFT_0840at 853.689 kb on + strand, within B158DRAFT_0840at 853.692 kb on - strand, within B158DRAFT_0840at 853.692 kb on - strand, within B158DRAFT_0840at 853.692 kb on - strand, within B158DRAFT_0840at 853.694 kb on + strand, within B158DRAFT_0840at 853.694 kb on + strand, within B158DRAFT_0840at 853.694 kb on + strand, within B158DRAFT_0840at 853.697 kb on - strand, within B158DRAFT_0840at 853.702 kb on - strand, within B158DRAFT_0840at 853.702 kb on - strand, within B158DRAFT_0840at 853.707 kb on + strand, within B158DRAFT_0840at 853.709 kb on + strand, within B158DRAFT_0840at 853.709 kb on + strand, within B158DRAFT_0840at 853.709 kb on + strand, within B158DRAFT_0840at 853.709 kb on + strand, within B158DRAFT_0840at 853.709 kb on + strand, within B158DRAFT_0840at 853.709 kb on + strand, within B158DRAFT_0840at 853.709 kb on + strand, within B158DRAFT_0840at 853.709 kb on + strand, within B158DRAFT_0840at 853.709 kb on + strand, within B158DRAFT_0840at 853.709 kb on + strand, within B158DRAFT_0840at 853.709 kb on + strand, within B158DRAFT_0840at 853.709 kb on + strand, within B158DRAFT_0840at 853.717 kb on - strand, within B158DRAFT_0840at 853.717 kb on - strand, within B158DRAFT_0840at 853.717 kb on - strand, within B158DRAFT_0840at 853.717 kb on - strand, within B158DRAFT_0840at 853.717 kb on - strand, within B158DRAFT_0840at 853.717 kb on - strand, within B158DRAFT_0840at 853.717 kb on - strand, within B158DRAFT_0840at 853.717 kb on - strand, within B158DRAFT_0840at 853.717 kb on - strand, within B158DRAFT_0840at 853.717 kb on - strand, within B158DRAFT_0840at 853.717 kb on - strand, within B158DRAFT_0840at 853.717 kb on - strand, within B158DRAFT_0840at 853.717 kb on - strand, within B158DRAFT_0840at 853.717 kb on - strand, within B158DRAFT_0840at 853.753 kb on + strand, within B158DRAFT_0840at 853.753 kb on + strand, within B158DRAFT_0840at 853.753 kb on + strand, within B158DRAFT_0840at 853.753 kb on + strand, within B158DRAFT_0840at 853.761 kb on - strand, within B158DRAFT_0840at 853.761 kb on - strand, within B158DRAFT_0840at 853.761 kb on - strand, within B158DRAFT_0840at 853.761 kb on - strand, within B158DRAFT_0840at 853.761 kb on - strand, within B158DRAFT_0840at 853.761 kb on - strand, within B158DRAFT_0840at 853.761 kb on - strand, within B158DRAFT_0840at 853.761 kb on - strand, within B158DRAFT_0840at 853.761 kb on - strand, within B158DRAFT_0840at 853.761 kb on - strand, within B158DRAFT_0840at 853.761 kb on - strand, within B158DRAFT_0840at 853.761 kb on - strand, within B158DRAFT_0840at 853.778 kb on + strand, within B158DRAFT_0840at 853.811 kb on + strand, within B158DRAFT_0840at 853.834 kb on + strand, within B158DRAFT_0840at 853.834 kb on + strand, within B158DRAFT_0840at 853.840 kb on + strand, within B158DRAFT_0840at 853.842 kb on - strand, within B158DRAFT_0840at 853.842 kb on - strand, within B158DRAFT_0840at 853.958 kb on + strand, within B158DRAFT_0840at 853.962 kb on + strand, within B158DRAFT_0840

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml
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850,560 + B158DRAFT_0838 0.69 +0.1
850,657 + B158DRAFT_0838 0.72 -2.9
850,665 - B158DRAFT_0838 0.73 +0.2
850,690 - B158DRAFT_0838 0.73 +0.1
850,755 + B158DRAFT_0838 0.76 -1.2
850,793 + B158DRAFT_0838 0.77 -2.4
850,793 + B158DRAFT_0838 0.77 +0.5
850,793 + B158DRAFT_0838 0.77 +1.1
850,793 + B158DRAFT_0838 0.77 -0.8
850,793 + B158DRAFT_0838 0.77 -0.9
850,801 - B158DRAFT_0838 0.77 +0.3
850,801 - B158DRAFT_0838 0.77 -0.2
850,801 - B158DRAFT_0838 0.77 +0.6
850,901 - B158DRAFT_0838 0.81 -0.7
850,902 + B158DRAFT_0838 0.81 +0.0
850,908 + B158DRAFT_0838 0.81 -0.6
850,909 + B158DRAFT_0838 0.81 -0.1
850,910 + B158DRAFT_0838 0.81 -0.5
850,911 - B158DRAFT_0838 0.81 -0.7
850,916 - B158DRAFT_0838 0.81 +0.7
850,917 - B158DRAFT_0838 0.81 -0.2
850,917 - B158DRAFT_0838 0.81 +0.6
850,947 - B158DRAFT_0838 0.82 +0.4
850,949 - B158DRAFT_0838 0.82 -0.6
850,988 + B158DRAFT_0838 0.84 -0.1
851,115 + B158DRAFT_0838 0.88 -0.4
851,132 + B158DRAFT_0838 0.89 +0.2
851,204 - -2.9
851,204 - -3.4
851,535 + -2.2
851,558 - +1.1
851,606 + -0.2
851,606 + -0.8
851,807 - B158DRAFT_0839 0.20 -3.3
851,807 - B158DRAFT_0839 0.20 +0.1
851,807 - B158DRAFT_0839 0.20 -0.9
851,827 - B158DRAFT_0839 0.21 +0.4
851,827 - B158DRAFT_0839 0.21 +0.0
851,849 - B158DRAFT_0839 0.23 -1.5
851,850 - B158DRAFT_0839 0.23 +0.6
851,917 + B158DRAFT_0839 0.27 -2.0
851,917 + B158DRAFT_0839 0.27 +1.1
851,922 + B158DRAFT_0839 0.28 +0.6
851,922 + B158DRAFT_0839 0.28 +0.5
851,922 + B158DRAFT_0839 0.28 -1.0
851,922 + B158DRAFT_0839 0.28 -0.0
851,922 + B158DRAFT_0839 0.28 -0.1
851,925 - B158DRAFT_0839 0.28 +0.3
851,927 + B158DRAFT_0839 0.28 +0.7
851,927 + B158DRAFT_0839 0.28 -2.5
851,927 + B158DRAFT_0839 0.28 +0.2
851,927 + B158DRAFT_0839 0.28 -2.2
851,927 + B158DRAFT_0839 0.28 -0.4
851,927 + B158DRAFT_0839 0.28 -0.1
851,927 + B158DRAFT_0839 0.28 -1.0
851,930 - B158DRAFT_0839 0.28 -0.2
851,930 - B158DRAFT_0839 0.28 -0.8
851,930 - B158DRAFT_0839 0.28 -0.2
851,930 - B158DRAFT_0839 0.28 -0.2
851,930 - B158DRAFT_0839 0.28 +0.3
851,930 - B158DRAFT_0839 0.28 -0.3
851,930 - B158DRAFT_0839 0.28 +0.8
851,930 - B158DRAFT_0839 0.28 +0.3
851,930 - B158DRAFT_0839 0.28 -5.2
851,930 - B158DRAFT_0839 0.28 -0.0
851,935 - B158DRAFT_0839 0.28 +2.1
851,935 - B158DRAFT_0839 0.28 +0.8
851,935 - B158DRAFT_0839 0.28 -1.2
851,937 - B158DRAFT_0839 0.29 +0.0
852,083 + B158DRAFT_0839 0.39 -1.5
852,083 + B158DRAFT_0839 0.39 -0.6
852,095 + B158DRAFT_0839 0.39 -4.0
852,095 + B158DRAFT_0839 0.39 -0.6
852,103 - B158DRAFT_0839 0.40 -0.4
852,155 + B158DRAFT_0839 0.43 -1.3
852,186 + B158DRAFT_0839 0.46 -0.7
852,212 + B158DRAFT_0839 0.47 -4.1
852,220 - B158DRAFT_0839 0.48 -2.6
852,222 + B158DRAFT_0839 0.48 -0.3
852,222 + B158DRAFT_0839 0.48 -1.9
852,233 + B158DRAFT_0839 0.49 +0.1
852,233 + B158DRAFT_0839 0.49 -0.3
852,233 + B158DRAFT_0839 0.49 -0.8
852,233 + B158DRAFT_0839 0.49 -0.2
852,233 + B158DRAFT_0839 0.49 -1.4
852,241 - B158DRAFT_0839 0.49 -0.8
852,241 - B158DRAFT_0839 0.49 -0.2
852,241 - B158DRAFT_0839 0.49 -0.1
852,245 - B158DRAFT_0839 0.50 +0.2
852,256 + B158DRAFT_0839 0.50 +0.5
852,271 - B158DRAFT_0839 0.51 +0.9
852,297 + B158DRAFT_0839 0.53 +0.8
852,305 - B158DRAFT_0839 0.54 -4.0
852,307 + B158DRAFT_0839 0.54 +0.1
852,307 + B158DRAFT_0839 0.54 -4.1
852,307 + B158DRAFT_0839 0.54 -0.6
852,315 - B158DRAFT_0839 0.54 +0.4
852,352 - B158DRAFT_0839 0.57 -5.0
852,364 + B158DRAFT_0839 0.58 -0.1
852,390 + B158DRAFT_0839 0.59 -2.0
852,406 + B158DRAFT_0839 0.61 -5.2
852,406 + B158DRAFT_0839 0.61 -4.3
852,414 - B158DRAFT_0839 0.61 +1.4
852,458 + B158DRAFT_0839 0.64 -0.3
852,505 - B158DRAFT_0839 0.67 -0.8
852,505 - B158DRAFT_0839 0.67 -0.5
852,505 - B158DRAFT_0839 0.67 +0.0
852,519 - B158DRAFT_0839 0.68 +0.4
852,527 + B158DRAFT_0839 0.69 +0.3
852,539 + B158DRAFT_0839 0.70 +1.5
852,620 + B158DRAFT_0839 0.75 +0.7
852,741 - B158DRAFT_0839 0.83 -0.3
852,825 - B158DRAFT_0839 0.89 +0.6
852,870 + +1.3
852,885 - +0.1
852,966 + +0.1
852,968 + -1.6
852,974 + +0.8
852,999 - +0.3
853,101 - -0.2
853,159 + +0.8
853,170 + -0.7
853,176 + +0.2
853,178 - -0.2
853,181 + +0.5
853,232 - +0.3
853,242 + +0.0
853,244 - -0.5
853,244 - +1.5
853,247 + +0.0
853,247 + +0.1
853,247 + -1.6
853,315 + -0.1
853,347 + -0.3
853,454 + B158DRAFT_0840 0.13 -2.9
853,465 + B158DRAFT_0840 0.13 -0.7
853,614 - B158DRAFT_0840 0.18 -0.3
853,614 - B158DRAFT_0840 0.18 -0.4
853,614 - B158DRAFT_0840 0.18 +0.5
853,679 + B158DRAFT_0840 0.20 -4.3
853,684 + B158DRAFT_0840 0.20 -0.8
853,684 + B158DRAFT_0840 0.20 -0.9
853,684 + B158DRAFT_0840 0.20 -0.1
853,689 + B158DRAFT_0840 0.20 -4.8
853,692 - B158DRAFT_0840 0.20 -0.8
853,692 - B158DRAFT_0840 0.20 +0.8
853,692 - B158DRAFT_0840 0.20 +2.2
853,694 + B158DRAFT_0840 0.20 +0.3
853,694 + B158DRAFT_0840 0.20 +0.0
853,694 + B158DRAFT_0840 0.20 -0.2
853,697 - B158DRAFT_0840 0.20 +0.1
853,702 - B158DRAFT_0840 0.20 +0.4
853,702 - B158DRAFT_0840 0.20 -2.3
853,707 + B158DRAFT_0840 0.21 +0.3
853,709 + B158DRAFT_0840 0.21 +1.3
853,709 + B158DRAFT_0840 0.21 +0.9
853,709 + B158DRAFT_0840 0.21 +1.2
853,709 + B158DRAFT_0840 0.21 -0.9
853,709 + B158DRAFT_0840 0.21 +0.2
853,709 + B158DRAFT_0840 0.21 -0.2
853,709 + B158DRAFT_0840 0.21 +0.1
853,709 + B158DRAFT_0840 0.21 -4.3
853,709 + B158DRAFT_0840 0.21 +0.0
853,709 + B158DRAFT_0840 0.21 +0.8
853,709 + B158DRAFT_0840 0.21 +1.7
853,709 + B158DRAFT_0840 0.21 +0.4
853,717 - B158DRAFT_0840 0.21 +0.6
853,717 - B158DRAFT_0840 0.21 -0.9
853,717 - B158DRAFT_0840 0.21 -1.4
853,717 - B158DRAFT_0840 0.21 -0.4
853,717 - B158DRAFT_0840 0.21 -0.9
853,717 - B158DRAFT_0840 0.21 -2.4
853,717 - B158DRAFT_0840 0.21 -0.4
853,717 - B158DRAFT_0840 0.21 +0.3
853,717 - B158DRAFT_0840 0.21 -4.4
853,717 - B158DRAFT_0840 0.21 +0.5
853,717 - B158DRAFT_0840 0.21 -0.5
853,717 - B158DRAFT_0840 0.21 +0.9
853,717 - B158DRAFT_0840 0.21 +0.3
853,717 - B158DRAFT_0840 0.21 -0.6
853,753 + B158DRAFT_0840 0.22 -1.7
853,753 + B158DRAFT_0840 0.22 +0.6
853,753 + B158DRAFT_0840 0.22 -0.3
853,753 + B158DRAFT_0840 0.22 -1.4
853,761 - B158DRAFT_0840 0.22 +0.9
853,761 - B158DRAFT_0840 0.22 +0.3
853,761 - B158DRAFT_0840 0.22 +0.1
853,761 - B158DRAFT_0840 0.22 -4.7
853,761 - B158DRAFT_0840 0.22 +0.1
853,761 - B158DRAFT_0840 0.22 +0.2
853,761 - B158DRAFT_0840 0.22 -0.1
853,761 - B158DRAFT_0840 0.22 +1.2
853,761 - B158DRAFT_0840 0.22 -0.4
853,761 - B158DRAFT_0840 0.22 +0.4
853,761 - B158DRAFT_0840 0.22 -5.2
853,761 - B158DRAFT_0840 0.22 -0.4
853,778 + B158DRAFT_0840 0.23 +0.3
853,811 + B158DRAFT_0840 0.24 +0.9
853,834 + B158DRAFT_0840 0.25 -3.5
853,834 + B158DRAFT_0840 0.25 +0.1
853,840 + B158DRAFT_0840 0.25 +0.2
853,842 - B158DRAFT_0840 0.25 -2.8
853,842 - B158DRAFT_0840 0.25 +3.2
853,958 + B158DRAFT_0840 0.29 +0.6
853,962 + B158DRAFT_0840 0.29 +1.8

Or see this region's nucleotide sequence