Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0833 and B158DRAFT_0834 overlap by 27 nucleotides B158DRAFT_0834 and B158DRAFT_0835 are separated by 15 nucleotides B158DRAFT_0835 and B158DRAFT_0836 are separated by 108 nucleotides
B158DRAFT_0833: B158DRAFT_0833 - undecaprenyl-diphosphatase UppP, at 843,418 to 844,242
_0833
B158DRAFT_0834: B158DRAFT_0834 - tRNA nucleotidyltransferase/poly(A) polymerase, at 844,216 to 845,451
_0834
B158DRAFT_0835: B158DRAFT_0835 - hypothetical protein, at 845,467 to 845,937
_0835
B158DRAFT_0836: B158DRAFT_0836 - Type II secretory pathway, component ExeA (predicted ATPase), at 846,046 to 847,779
_0836
Position (kb) 844
845
846 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 843.342 kb on + strand at 845.456 kb on + strand at 845.469 kb on + strand at 845.469 kb on + strand at 845.477 kb on - strand at 845.477 kb on - strand at 845.477 kb on - strand at 845.477 kb on - strand at 845.477 kb on - strand at 845.487 kb on - strand at 845.517 kb on - strand, within B158DRAFT_0835 at 845.524 kb on + strand, within B158DRAFT_0835 at 845.582 kb on + strand, within B158DRAFT_0835 at 845.726 kb on - strand, within B158DRAFT_0835 at 845.746 kb on + strand, within B158DRAFT_0835 at 845.751 kb on + strand, within B158DRAFT_0835 at 845.751 kb on + strand, within B158DRAFT_0835 at 845.829 kb on - strand, within B158DRAFT_0835 at 845.830 kb on - strand, within B158DRAFT_0835 at 845.886 kb on - strand, within B158DRAFT_0835 at 845.894 kb on - strand at 845.894 kb on - strand at 845.896 kb on - strand at 845.899 kb on - strand at 845.906 kb on - strand at 845.928 kb on - strand at 846.046 kb on - strand at 846.131 kb on + strand at 846.145 kb on + strand at 846.149 kb on - strand at 846.173 kb on - strand at 846.207 kb on + strand at 846.224 kb on + strand, within B158DRAFT_0836 at 846.232 kb on - strand, within B158DRAFT_0836 at 846.293 kb on + strand, within B158DRAFT_0836 at 846.293 kb on + strand, within B158DRAFT_0836 at 846.401 kb on + strand, within B158DRAFT_0836 at 846.412 kb on + strand, within B158DRAFT_0836 at 846.413 kb on + strand, within B158DRAFT_0836 at 846.420 kb on - strand, within B158DRAFT_0836 at 846.420 kb on - strand, within B158DRAFT_0836 at 846.420 kb on - strand, within B158DRAFT_0836 at 846.424 kb on + strand, within B158DRAFT_0836
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml remove 843,342 + -1.7 845,456 + -3.2 845,469 + +0.7 845,469 + +0.4 845,477 - -0.5 845,477 - -1.2 845,477 - -4.2 845,477 - -1.5 845,477 - +0.6 845,487 - -1.2 845,517 - B158DRAFT_0835 0.11 -0.3 845,524 + B158DRAFT_0835 0.12 -2.4 845,582 + B158DRAFT_0835 0.24 +0.9 845,726 - B158DRAFT_0835 0.55 +0.4 845,746 + B158DRAFT_0835 0.59 -0.5 845,751 + B158DRAFT_0835 0.60 -1.1 845,751 + B158DRAFT_0835 0.60 -0.5 845,829 - B158DRAFT_0835 0.77 -2.6 845,830 - B158DRAFT_0835 0.77 +0.9 845,886 - B158DRAFT_0835 0.89 -0.5 845,894 - -0.1 845,894 - -0.1 845,896 - +0.7 845,899 - +0.0 845,906 - -1.2 845,928 - +1.3 846,046 - -0.8 846,131 + +0.4 846,145 + -0.2 846,149 - +0.4 846,173 - +0.8 846,207 + -0.4 846,224 + B158DRAFT_0836 0.10 -0.7 846,232 - B158DRAFT_0836 0.11 -0.3 846,293 + B158DRAFT_0836 0.14 +0.5 846,293 + B158DRAFT_0836 0.14 -1.0 846,401 + B158DRAFT_0836 0.20 -0.1 846,412 + B158DRAFT_0836 0.21 -0.2 846,413 + B158DRAFT_0836 0.21 -1.8 846,420 - B158DRAFT_0836 0.22 -2.1 846,420 - B158DRAFT_0836 0.22 -0.5 846,420 - B158DRAFT_0836 0.22 -0.4 846,424 + B158DRAFT_0836 0.22 +0.0
Or see this region's nucleotide sequence