Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0616 and B158DRAFT_0617 overlap by 4 nucleotides B158DRAFT_0617 and B158DRAFT_0618 overlap by 4 nucleotides B158DRAFT_0618 and B158DRAFT_0619 are separated by 148 nucleotides B158DRAFT_0619 and B158DRAFT_0620 are separated by 176 nucleotides
B158DRAFT_0616: B158DRAFT_0616 - carbamoyl-phosphate synthase, large subunit, at 623,970 to 627,194
_0616
B158DRAFT_0617: B158DRAFT_0617 - transcription elongation factor GreA, at 627,191 to 627,673
_0617
B158DRAFT_0618: B158DRAFT_0618 - Predicted transcriptional regulators, at 627,670 to 628,251
_0618
B158DRAFT_0619: B158DRAFT_0619 - hypothetical protein, at 628,400 to 628,909
_0619
B158DRAFT_0620: B158DRAFT_0620 - Uncharacterized conserved protein, at 629,086 to 630,033
_0620
Position (kb) 627
628
629 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 626.869 kb on + strand, within B158DRAFT_0616 at 626.869 kb on + strand, within B158DRAFT_0616 at 627.139 kb on + strand at 627.142 kb on - strand at 627.149 kb on + strand at 627.210 kb on - strand at 627.229 kb on + strand at 627.267 kb on + strand, within B158DRAFT_0617 at 627.331 kb on + strand, within B158DRAFT_0617 at 627.360 kb on - strand, within B158DRAFT_0617 at 627.464 kb on - strand, within B158DRAFT_0617 at 627.632 kb on - strand at 627.667 kb on - strand at 627.904 kb on - strand, within B158DRAFT_0618 at 627.910 kb on + strand, within B158DRAFT_0618 at 627.958 kb on + strand, within B158DRAFT_0618 at 627.984 kb on + strand, within B158DRAFT_0618 at 627.984 kb on + strand, within B158DRAFT_0618 at 627.992 kb on - strand, within B158DRAFT_0618 at 627.992 kb on - strand, within B158DRAFT_0618 at 628.065 kb on + strand, within B158DRAFT_0618 at 628.087 kb on + strand, within B158DRAFT_0618 at 628.123 kb on + strand, within B158DRAFT_0618 at 628.133 kb on + strand, within B158DRAFT_0618 at 628.135 kb on - strand, within B158DRAFT_0618 at 628.198 kb on - strand at 628.506 kb on - strand, within B158DRAFT_0619 at 628.673 kb on - strand, within B158DRAFT_0619 at 628.675 kb on + strand, within B158DRAFT_0619 at 628.937 kb on - strand at 629.029 kb on + strand at 629.037 kb on - strand at 629.037 kb on - strand at 629.037 kb on - strand at 629.179 kb on - strand at 629.192 kb on + strand, within B158DRAFT_0620 at 629.230 kb on + strand, within B158DRAFT_0620 at 629.238 kb on - strand, within B158DRAFT_0620
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml remove 626,869 + B158DRAFT_0616 0.90 -2.4 626,869 + B158DRAFT_0616 0.90 -0.3 627,139 + +2.7 627,142 - +0.6 627,149 + -0.4 627,210 - +0.9 627,229 + -3.5 627,267 + B158DRAFT_0617 0.16 +0.1 627,331 + B158DRAFT_0617 0.29 -0.3 627,360 - B158DRAFT_0617 0.35 +0.3 627,464 - B158DRAFT_0617 0.57 -0.3 627,632 - -0.0 627,667 - -0.5 627,904 - B158DRAFT_0618 0.40 -0.1 627,910 + B158DRAFT_0618 0.41 -4.0 627,958 + B158DRAFT_0618 0.49 +0.5 627,984 + B158DRAFT_0618 0.54 +0.1 627,984 + B158DRAFT_0618 0.54 +0.1 627,992 - B158DRAFT_0618 0.55 -4.3 627,992 - B158DRAFT_0618 0.55 -0.0 628,065 + B158DRAFT_0618 0.68 +0.5 628,087 + B158DRAFT_0618 0.72 -1.3 628,123 + B158DRAFT_0618 0.78 -0.5 628,133 + B158DRAFT_0618 0.80 +0.2 628,135 - B158DRAFT_0618 0.80 +0.0 628,198 - +0.0 628,506 - B158DRAFT_0619 0.21 -1.4 628,673 - B158DRAFT_0619 0.54 +0.5 628,675 + B158DRAFT_0619 0.54 -1.0 628,937 - +0.3 629,029 + +0.3 629,037 - +0.1 629,037 - -0.5 629,037 - -0.8 629,179 - -0.1 629,192 + B158DRAFT_0620 0.11 -0.1 629,230 + B158DRAFT_0620 0.15 -1.3 629,238 - B158DRAFT_0620 0.16 -0.4
Or see this region's nucleotide sequence