Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0586

Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0585 and B158DRAFT_0586 are separated by 25 nucleotidesB158DRAFT_0586 and B158DRAFT_0587 are separated by 2 nucleotidesB158DRAFT_0587 and B158DRAFT_0588 are separated by 82 nucleotides B158DRAFT_0585: B158DRAFT_0585 - Short-chain alcohol dehydrogenase of unknown specificity, at 590,866 to 591,648 _0585 B158DRAFT_0586: B158DRAFT_0586 - Uncharacterized protein conserved in bacteria, at 591,674 to 592,102 _0586 B158DRAFT_0587: B158DRAFT_0587 - FKBP-type peptidyl-prolyl cis-trans isomerases 2, at 592,105 to 592,587 _0587 B158DRAFT_0588: B158DRAFT_0588 - ribonuclease PH, at 592,670 to 593,386 _0588 Position (kb) 591 592 593Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 590.715 kb on - strandat 590.730 kb on + strandat 590.738 kb on - strandat 590.808 kb on + strandat 590.808 kb on + strandat 590.816 kb on - strandat 590.816 kb on - strandat 590.816 kb on - strandat 590.816 kb on - strandat 590.816 kb on - strandat 590.854 kb on + strandat 590.917 kb on - strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.972 kb on - strand, within B158DRAFT_0585at 591.017 kb on + strand, within B158DRAFT_0585at 591.024 kb on + strand, within B158DRAFT_0585at 591.078 kb on + strand, within B158DRAFT_0585at 591.078 kb on + strand, within B158DRAFT_0585at 591.078 kb on + strand, within B158DRAFT_0585at 591.078 kb on + strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.103 kb on + strand, within B158DRAFT_0585at 591.132 kb on + strand, within B158DRAFT_0585at 591.167 kb on - strand, within B158DRAFT_0585at 591.190 kb on + strand, within B158DRAFT_0585at 591.190 kb on + strand, within B158DRAFT_0585at 591.198 kb on - strand, within B158DRAFT_0585at 591.198 kb on - strand, within B158DRAFT_0585at 591.398 kb on + strand, within B158DRAFT_0585at 591.406 kb on - strand, within B158DRAFT_0585at 591.406 kb on - strand, within B158DRAFT_0585at 591.408 kb on - strand, within B158DRAFT_0585at 591.495 kb on + strand, within B158DRAFT_0585at 591.495 kb on + strand, within B158DRAFT_0585at 591.502 kb on + strand, within B158DRAFT_0585at 591.518 kb on + strand, within B158DRAFT_0585at 591.518 kb on + strand, within B158DRAFT_0585at 591.518 kb on + strand, within B158DRAFT_0585at 591.518 kb on + strand, within B158DRAFT_0585at 591.520 kb on + strand, within B158DRAFT_0585at 591.526 kb on - strand, within B158DRAFT_0585at 591.528 kb on - strand, within B158DRAFT_0585at 591.528 kb on - strand, within B158DRAFT_0585at 591.543 kb on + strand, within B158DRAFT_0585at 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.609 kb on + strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.617 kb on - strandat 591.651 kb on - strandat 591.651 kb on - strandat 591.651 kb on - strandat 591.653 kb on + strandat 591.661 kb on - strandat 591.733 kb on - strand, within B158DRAFT_0586at 591.771 kb on - strand, within B158DRAFT_0586at 591.888 kb on - strand, within B158DRAFT_0586at 591.913 kb on - strand, within B158DRAFT_0586at 591.929 kb on - strand, within B158DRAFT_0586at 591.934 kb on - strand, within B158DRAFT_0586at 591.934 kb on - strand, within B158DRAFT_0586at 591.946 kb on - strand, within B158DRAFT_0586at 592.004 kb on + strand, within B158DRAFT_0586at 592.012 kb on - strand, within B158DRAFT_0586at 592.052 kb on + strand, within B158DRAFT_0586at 592.129 kb on + strandat 592.162 kb on + strand, within B158DRAFT_0587at 592.162 kb on + strand, within B158DRAFT_0587at 592.170 kb on - strand, within B158DRAFT_0587at 592.178 kb on + strand, within B158DRAFT_0587at 592.178 kb on + strand, within B158DRAFT_0587at 592.275 kb on + strand, within B158DRAFT_0587at 592.275 kb on + strand, within B158DRAFT_0587at 592.275 kb on + strand, within B158DRAFT_0587at 592.283 kb on - strand, within B158DRAFT_0587at 592.334 kb on + strand, within B158DRAFT_0587at 592.334 kb on + strand, within B158DRAFT_0587at 592.342 kb on - strand, within B158DRAFT_0587at 592.351 kb on + strand, within B158DRAFT_0587at 592.374 kb on + strand, within B158DRAFT_0587at 592.382 kb on - strand, within B158DRAFT_0587at 592.382 kb on - strand, within B158DRAFT_0587at 592.382 kb on - strand, within B158DRAFT_0587at 592.389 kb on - strand, within B158DRAFT_0587at 592.390 kb on - strand, within B158DRAFT_0587at 592.421 kb on + strand, within B158DRAFT_0587at 592.448 kb on + strand, within B158DRAFT_0587at 592.473 kb on + strand, within B158DRAFT_0587at 592.473 kb on + strand, within B158DRAFT_0587at 592.473 kb on + strand, within B158DRAFT_0587at 592.528 kb on + strand, within B158DRAFT_0587at 592.660 kb on + strandat 592.660 kb on + strandat 592.668 kb on - strandat 592.755 kb on + strand, within B158DRAFT_0588at 592.978 kb on + strand, within B158DRAFT_0588at 592.986 kb on - strand, within B158DRAFT_0588

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml
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590,715 - +2.8
590,730 + +0.0
590,738 - +0.7
590,808 + -0.0
590,808 + -0.5
590,816 - +0.5
590,816 - +0.1
590,816 - -0.8
590,816 - +0.3
590,816 - +1.2
590,854 + +0.7
590,917 - -3.8
590,920 + -0.2
590,920 + +0.2
590,920 + -2.0
590,920 + -1.9
590,920 + -0.1
590,920 + -0.4
590,920 + +0.5
590,928 - +0.3
590,928 - -1.4
590,928 - -3.2
590,928 - -0.1
590,928 - -0.3
590,928 - -2.7
590,928 - -1.5
590,972 - B158DRAFT_0585 0.14 -0.8
591,017 + B158DRAFT_0585 0.19 -0.6
591,024 + B158DRAFT_0585 0.20 +0.9
591,078 + B158DRAFT_0585 0.27 +0.6
591,078 + B158DRAFT_0585 0.27 -0.2
591,078 + B158DRAFT_0585 0.27 +2.1
591,078 + B158DRAFT_0585 0.27 +1.0
591,086 - B158DRAFT_0585 0.28 -0.3
591,086 - B158DRAFT_0585 0.28 -0.0
591,086 - B158DRAFT_0585 0.28 +0.1
591,086 - B158DRAFT_0585 0.28 -3.4
591,086 - B158DRAFT_0585 0.28 +0.9
591,086 - B158DRAFT_0585 0.28 -0.4
591,086 - B158DRAFT_0585 0.28 +0.4
591,103 + B158DRAFT_0585 0.30 -0.1
591,132 + B158DRAFT_0585 0.34 +1.3
591,167 - B158DRAFT_0585 0.38 -1.2
591,190 + B158DRAFT_0585 0.41 -2.1
591,190 + B158DRAFT_0585 0.41 -3.7
591,198 - B158DRAFT_0585 0.42 -3.4
591,198 - B158DRAFT_0585 0.42 +0.5
591,398 + B158DRAFT_0585 0.68 -1.2
591,406 - B158DRAFT_0585 0.69 +0.5
591,406 - B158DRAFT_0585 0.69 +0.0
591,408 - B158DRAFT_0585 0.69 +0.3
591,495 + B158DRAFT_0585 0.80 +0.5
591,495 + B158DRAFT_0585 0.80 +1.6
591,502 + B158DRAFT_0585 0.81 -0.0
591,518 + B158DRAFT_0585 0.83 +1.1
591,518 + B158DRAFT_0585 0.83 -0.3
591,518 + B158DRAFT_0585 0.83 -0.5
591,518 + B158DRAFT_0585 0.83 +1.1
591,520 + B158DRAFT_0585 0.84 +1.1
591,526 - B158DRAFT_0585 0.84 +2.3
591,528 - B158DRAFT_0585 0.85 -0.1
591,528 - B158DRAFT_0585 0.85 +1.2
591,543 + B158DRAFT_0585 0.86 -4.2
591,609 + +0.4
591,609 + -0.0
591,609 + -5.6
591,609 + -0.2
591,609 + +1.3
591,609 + +1.5
591,609 + +0.0
591,609 + -4.7
591,609 + +0.5
591,609 + +0.2
591,609 + +0.6
591,609 + -1.1
591,609 + +0.2
591,609 + -0.4
591,609 + -0.3
591,609 + -0.9
591,609 + +0.1
591,609 + -0.2
591,609 + -0.8
591,609 + -0.5
591,617 - -1.7
591,617 - -0.8
591,617 - +0.4
591,617 - +0.3
591,617 - -1.0
591,617 - -3.4
591,617 - +2.9
591,617 - -0.7
591,617 - -0.6
591,617 - -0.5
591,617 - -1.0
591,617 - -0.1
591,617 - +0.3
591,617 - -0.6
591,617 - -1.6
591,617 - -0.5
591,651 - +0.6
591,651 - -0.4
591,651 - +0.4
591,653 + +0.5
591,661 - -0.4
591,733 - B158DRAFT_0586 0.14 -0.6
591,771 - B158DRAFT_0586 0.23 -0.1
591,888 - B158DRAFT_0586 0.50 -0.3
591,913 - B158DRAFT_0586 0.56 -2.8
591,929 - B158DRAFT_0586 0.59 +1.0
591,934 - B158DRAFT_0586 0.61 -1.1
591,934 - B158DRAFT_0586 0.61 -0.1
591,946 - B158DRAFT_0586 0.63 -4.1
592,004 + B158DRAFT_0586 0.77 -3.1
592,012 - B158DRAFT_0586 0.79 +0.3
592,052 + B158DRAFT_0586 0.88 +0.3
592,129 + +0.1
592,162 + B158DRAFT_0587 0.12 +0.5
592,162 + B158DRAFT_0587 0.12 +0.2
592,170 - B158DRAFT_0587 0.13 -0.6
592,178 + B158DRAFT_0587 0.15 -0.3
592,178 + B158DRAFT_0587 0.15 +1.2
592,275 + B158DRAFT_0587 0.35 -0.5
592,275 + B158DRAFT_0587 0.35 -0.1
592,275 + B158DRAFT_0587 0.35 -1.8
592,283 - B158DRAFT_0587 0.37 -0.9
592,334 + B158DRAFT_0587 0.47 +0.5
592,334 + B158DRAFT_0587 0.47 -0.5
592,342 - B158DRAFT_0587 0.49 -1.4
592,351 + B158DRAFT_0587 0.51 -0.2
592,374 + B158DRAFT_0587 0.56 -2.9
592,382 - B158DRAFT_0587 0.57 -0.2
592,382 - B158DRAFT_0587 0.57 -2.0
592,382 - B158DRAFT_0587 0.57 +1.1
592,389 - B158DRAFT_0587 0.59 +0.6
592,390 - B158DRAFT_0587 0.59 -4.6
592,421 + B158DRAFT_0587 0.65 -1.1
592,448 + B158DRAFT_0587 0.71 -0.9
592,473 + B158DRAFT_0587 0.76 +0.3
592,473 + B158DRAFT_0587 0.76 -0.6
592,473 + B158DRAFT_0587 0.76 +0.1
592,528 + B158DRAFT_0587 0.88 -0.1
592,660 + -0.4
592,660 + -4.3
592,668 - -0.2
592,755 + B158DRAFT_0588 0.12 -2.4
592,978 + B158DRAFT_0588 0.43 +0.1
592,986 - B158DRAFT_0588 0.44 -0.0

Or see this region's nucleotide sequence