Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0583

Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0582 and B158DRAFT_0583 are separated by 125 nucleotidesB158DRAFT_0583 and B158DRAFT_0584 are separated by 5 nucleotidesB158DRAFT_0584 and B158DRAFT_0585 are separated by 216 nucleotides B158DRAFT_0582: B158DRAFT_0582 - TIGR00255 family protein, at 588,465 to 589,331 _0582 B158DRAFT_0583: B158DRAFT_0583 - Bis(5'nucleosyl)-tetraphosphatase, ApaH, at 589,457 to 590,266 _0583 B158DRAFT_0584: B158DRAFT_0584 - Uncharacterized protein affecting Mg2+/Co2+ transport, at 590,272 to 590,649 _0584 B158DRAFT_0585: B158DRAFT_0585 - Short-chain alcohol dehydrogenase of unknown specificity, at 590,866 to 591,648 _0585 Position (kb) 589 590 591Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2 3at 588.482 kb on - strandat 588.625 kb on + strand, within B158DRAFT_0582at 588.661 kb on + strand, within B158DRAFT_0582at 588.661 kb on + strand, within B158DRAFT_0582at 588.730 kb on - strand, within B158DRAFT_0582at 588.830 kb on + strand, within B158DRAFT_0582at 588.920 kb on - strand, within B158DRAFT_0582at 588.923 kb on + strand, within B158DRAFT_0582at 588.923 kb on + strand, within B158DRAFT_0582at 588.939 kb on - strand, within B158DRAFT_0582at 588.980 kb on + strand, within B158DRAFT_0582at 589.012 kb on - strand, within B158DRAFT_0582at 589.013 kb on + strand, within B158DRAFT_0582at 589.013 kb on + strand, within B158DRAFT_0582at 589.021 kb on - strand, within B158DRAFT_0582at 589.021 kb on - strand, within B158DRAFT_0582at 589.021 kb on - strand, within B158DRAFT_0582at 589.021 kb on - strand, within B158DRAFT_0582at 589.021 kb on - strand, within B158DRAFT_0582at 589.032 kb on - strand, within B158DRAFT_0582at 589.093 kb on + strand, within B158DRAFT_0582at 589.136 kb on + strand, within B158DRAFT_0582at 589.136 kb on + strand, within B158DRAFT_0582at 589.138 kb on + strand, within B158DRAFT_0582at 589.144 kb on - strand, within B158DRAFT_0582at 589.144 kb on - strand, within B158DRAFT_0582at 589.146 kb on - strand, within B158DRAFT_0582at 589.155 kb on - strand, within B158DRAFT_0582at 589.170 kb on + strand, within B158DRAFT_0582at 589.170 kb on + strand, within B158DRAFT_0582at 589.175 kb on + strand, within B158DRAFT_0582at 589.175 kb on + strand, within B158DRAFT_0582at 589.175 kb on + strand, within B158DRAFT_0582at 589.175 kb on + strand, within B158DRAFT_0582at 589.175 kb on + strand, within B158DRAFT_0582at 589.177 kb on + strand, within B158DRAFT_0582at 589.183 kb on - strand, within B158DRAFT_0582at 589.183 kb on - strand, within B158DRAFT_0582at 589.183 kb on - strand, within B158DRAFT_0582at 589.183 kb on - strand, within B158DRAFT_0582at 589.183 kb on - strand, within B158DRAFT_0582at 589.185 kb on - strand, within B158DRAFT_0582at 589.202 kb on + strand, within B158DRAFT_0582at 589.210 kb on + strand, within B158DRAFT_0582at 589.227 kb on - strand, within B158DRAFT_0582at 589.273 kb on + strandat 589.276 kb on - strandat 589.277 kb on - strandat 589.278 kb on + strandat 589.278 kb on + strandat 589.286 kb on - strandat 589.418 kb on - strandat 589.432 kb on + strandat 589.440 kb on - strandat 589.440 kb on - strandat 589.457 kb on + strandat 589.457 kb on + strandat 589.458 kb on - strandat 589.465 kb on - strandat 589.465 kb on - strandat 589.509 kb on - strandat 589.557 kb on + strand, within B158DRAFT_0583at 589.557 kb on + strand, within B158DRAFT_0583at 589.640 kb on + strand, within B158DRAFT_0583at 589.671 kb on + strand, within B158DRAFT_0583at 589.721 kb on + strand, within B158DRAFT_0583at 589.721 kb on + strand, within B158DRAFT_0583at 589.726 kb on + strand, within B158DRAFT_0583at 589.734 kb on - strand, within B158DRAFT_0583at 589.734 kb on - strand, within B158DRAFT_0583at 589.758 kb on + strand, within B158DRAFT_0583at 589.788 kb on - strand, within B158DRAFT_0583at 589.788 kb on - strand, within B158DRAFT_0583at 589.788 kb on - strand, within B158DRAFT_0583at 589.788 kb on - strand, within B158DRAFT_0583at 589.794 kb on + strand, within B158DRAFT_0583at 589.865 kb on + strand, within B158DRAFT_0583at 589.873 kb on - strand, within B158DRAFT_0583at 589.873 kb on - strand, within B158DRAFT_0583at 589.873 kb on - strand, within B158DRAFT_0583at 589.919 kb on - strand, within B158DRAFT_0583at 589.993 kb on - strand, within B158DRAFT_0583at 590.040 kb on + strand, within B158DRAFT_0583at 590.083 kb on - strand, within B158DRAFT_0583at 590.125 kb on - strand, within B158DRAFT_0583at 590.183 kb on - strand, within B158DRAFT_0583at 590.185 kb on - strand, within B158DRAFT_0583at 590.195 kb on - strandat 590.381 kb on + strand, within B158DRAFT_0584at 590.381 kb on + strand, within B158DRAFT_0584at 590.381 kb on + strand, within B158DRAFT_0584at 590.388 kb on + strand, within B158DRAFT_0584at 590.388 kb on + strand, within B158DRAFT_0584at 590.389 kb on - strand, within B158DRAFT_0584at 590.389 kb on - strand, within B158DRAFT_0584at 590.389 kb on - strand, within B158DRAFT_0584at 590.389 kb on - strand, within B158DRAFT_0584at 590.389 kb on - strand, within B158DRAFT_0584at 590.389 kb on - strand, within B158DRAFT_0584at 590.391 kb on - strand, within B158DRAFT_0584at 590.391 kb on - strand, within B158DRAFT_0584at 590.396 kb on - strand, within B158DRAFT_0584at 590.396 kb on - strand, within B158DRAFT_0584at 590.396 kb on - strand, within B158DRAFT_0584at 590.396 kb on - strand, within B158DRAFT_0584at 590.424 kb on + strand, within B158DRAFT_0584at 590.424 kb on + strand, within B158DRAFT_0584at 590.424 kb on + strand, within B158DRAFT_0584at 590.424 kb on + strand, within B158DRAFT_0584at 590.429 kb on + strand, within B158DRAFT_0584at 590.429 kb on + strand, within B158DRAFT_0584at 590.429 kb on + strand, within B158DRAFT_0584at 590.437 kb on - strand, within B158DRAFT_0584at 590.437 kb on - strand, within B158DRAFT_0584at 590.437 kb on - strand, within B158DRAFT_0584at 590.437 kb on - strand, within B158DRAFT_0584at 590.437 kb on - strand, within B158DRAFT_0584at 590.437 kb on - strand, within B158DRAFT_0584at 590.442 kb on - strand, within B158DRAFT_0584at 590.452 kb on + strand, within B158DRAFT_0584at 590.460 kb on - strand, within B158DRAFT_0584at 590.460 kb on - strand, within B158DRAFT_0584at 590.520 kb on - strand, within B158DRAFT_0584at 590.525 kb on + strand, within B158DRAFT_0584at 590.535 kb on - strand, within B158DRAFT_0584at 590.545 kb on - strand, within B158DRAFT_0584at 590.554 kb on + strand, within B158DRAFT_0584at 590.558 kb on - strand, within B158DRAFT_0584at 590.568 kb on - strand, within B158DRAFT_0584at 590.663 kb on - strandat 590.715 kb on - strandat 590.730 kb on + strandat 590.738 kb on - strandat 590.808 kb on + strandat 590.808 kb on + strandat 590.816 kb on - strandat 590.816 kb on - strandat 590.816 kb on - strandat 590.816 kb on - strandat 590.816 kb on - strandat 590.854 kb on + strandat 590.917 kb on - strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.920 kb on + strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.928 kb on - strandat 590.972 kb on - strand, within B158DRAFT_0585at 591.017 kb on + strand, within B158DRAFT_0585at 591.024 kb on + strand, within B158DRAFT_0585at 591.078 kb on + strand, within B158DRAFT_0585at 591.078 kb on + strand, within B158DRAFT_0585at 591.078 kb on + strand, within B158DRAFT_0585at 591.078 kb on + strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.086 kb on - strand, within B158DRAFT_0585at 591.103 kb on + strand, within B158DRAFT_0585at 591.132 kb on + strand, within B158DRAFT_0585at 591.167 kb on - strand, within B158DRAFT_0585at 591.190 kb on + strand, within B158DRAFT_0585at 591.190 kb on + strand, within B158DRAFT_0585at 591.198 kb on - strand, within B158DRAFT_0585at 591.198 kb on - strand, within B158DRAFT_0585

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml
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588,482 - +0.3
588,625 + B158DRAFT_0582 0.18 +0.0
588,661 + B158DRAFT_0582 0.23 +0.2
588,661 + B158DRAFT_0582 0.23 -0.2
588,730 - B158DRAFT_0582 0.31 +0.0
588,830 + B158DRAFT_0582 0.42 +0.5
588,920 - B158DRAFT_0582 0.52 -0.3
588,923 + B158DRAFT_0582 0.53 -1.4
588,923 + B158DRAFT_0582 0.53 -1.2
588,939 - B158DRAFT_0582 0.55 +0.6
588,980 + B158DRAFT_0582 0.59 -0.2
589,012 - B158DRAFT_0582 0.63 +0.2
589,013 + B158DRAFT_0582 0.63 -0.6
589,013 + B158DRAFT_0582 0.63 -0.4
589,021 - B158DRAFT_0582 0.64 +0.2
589,021 - B158DRAFT_0582 0.64 -0.1
589,021 - B158DRAFT_0582 0.64 -0.4
589,021 - B158DRAFT_0582 0.64 -1.3
589,021 - B158DRAFT_0582 0.64 +0.4
589,032 - B158DRAFT_0582 0.65 -4.3
589,093 + B158DRAFT_0582 0.72 -1.7
589,136 + B158DRAFT_0582 0.77 -0.5
589,136 + B158DRAFT_0582 0.77 -2.1
589,138 + B158DRAFT_0582 0.78 -2.2
589,144 - B158DRAFT_0582 0.78 +0.7
589,144 - B158DRAFT_0582 0.78 -1.0
589,146 - B158DRAFT_0582 0.79 -2.9
589,155 - B158DRAFT_0582 0.80 -6.4
589,170 + B158DRAFT_0582 0.81 -3.1
589,170 + B158DRAFT_0582 0.81 +1.9
589,175 + B158DRAFT_0582 0.82 -0.0
589,175 + B158DRAFT_0582 0.82 +0.8
589,175 + B158DRAFT_0582 0.82 -0.9
589,175 + B158DRAFT_0582 0.82 -0.6
589,175 + B158DRAFT_0582 0.82 +0.7
589,177 + B158DRAFT_0582 0.82 -2.0
589,183 - B158DRAFT_0582 0.83 +0.9
589,183 - B158DRAFT_0582 0.83 -0.4
589,183 - B158DRAFT_0582 0.83 +0.2
589,183 - B158DRAFT_0582 0.83 +0.8
589,183 - B158DRAFT_0582 0.83 -0.2
589,185 - B158DRAFT_0582 0.83 +0.3
589,202 + B158DRAFT_0582 0.85 -3.0
589,210 + B158DRAFT_0582 0.86 -0.0
589,227 - B158DRAFT_0582 0.88 -0.7
589,273 + -1.0
589,276 - +0.2
589,277 - -0.6
589,278 + -5.7
589,278 + -0.1
589,286 - +1.0
589,418 - -3.0
589,432 + -1.6
589,440 - -0.9
589,440 - -1.7
589,457 + -4.7
589,457 + -0.8
589,458 - -0.1
589,465 - -0.3
589,465 - +0.3
589,509 - -1.9
589,557 + B158DRAFT_0583 0.12 -3.9
589,557 + B158DRAFT_0583 0.12 +0.0
589,640 + B158DRAFT_0583 0.23 -3.5
589,671 + B158DRAFT_0583 0.26 -0.1
589,721 + B158DRAFT_0583 0.33 -3.4
589,721 + B158DRAFT_0583 0.33 -4.1
589,726 + B158DRAFT_0583 0.33 -0.1
589,734 - B158DRAFT_0583 0.34 -0.1
589,734 - B158DRAFT_0583 0.34 -0.5
589,758 + B158DRAFT_0583 0.37 -0.3
589,788 - B158DRAFT_0583 0.41 +1.0
589,788 - B158DRAFT_0583 0.41 +0.7
589,788 - B158DRAFT_0583 0.41 +0.0
589,788 - B158DRAFT_0583 0.41 -2.9
589,794 + B158DRAFT_0583 0.42 +0.7
589,865 + B158DRAFT_0583 0.50 +1.2
589,873 - B158DRAFT_0583 0.51 -3.1
589,873 - B158DRAFT_0583 0.51 +0.6
589,873 - B158DRAFT_0583 0.51 -0.0
589,919 - B158DRAFT_0583 0.57 +0.2
589,993 - B158DRAFT_0583 0.66 +0.2
590,040 + B158DRAFT_0583 0.72 -0.2
590,083 - B158DRAFT_0583 0.77 -0.7
590,125 - B158DRAFT_0583 0.82 -0.6
590,183 - B158DRAFT_0583 0.90 +0.2
590,185 - B158DRAFT_0583 0.90 +0.2
590,195 - -0.1
590,381 + B158DRAFT_0584 0.29 -1.6
590,381 + B158DRAFT_0584 0.29 -0.3
590,381 + B158DRAFT_0584 0.29 +0.4
590,388 + B158DRAFT_0584 0.31 -0.3
590,388 + B158DRAFT_0584 0.31 +0.6
590,389 - B158DRAFT_0584 0.31 -0.1
590,389 - B158DRAFT_0584 0.31 +0.3
590,389 - B158DRAFT_0584 0.31 -2.7
590,389 - B158DRAFT_0584 0.31 -0.1
590,389 - B158DRAFT_0584 0.31 +0.3
590,389 - B158DRAFT_0584 0.31 +0.1
590,391 - B158DRAFT_0584 0.31 +0.5
590,391 - B158DRAFT_0584 0.31 -3.1
590,396 - B158DRAFT_0584 0.33 -0.4
590,396 - B158DRAFT_0584 0.33 -0.5
590,396 - B158DRAFT_0584 0.33 +2.8
590,396 - B158DRAFT_0584 0.33 +0.2
590,424 + B158DRAFT_0584 0.40 -0.3
590,424 + B158DRAFT_0584 0.40 -0.2
590,424 + B158DRAFT_0584 0.40 +0.1
590,424 + B158DRAFT_0584 0.40 +0.4
590,429 + B158DRAFT_0584 0.42 +0.5
590,429 + B158DRAFT_0584 0.42 -1.7
590,429 + B158DRAFT_0584 0.42 +0.4
590,437 - B158DRAFT_0584 0.44 +1.7
590,437 - B158DRAFT_0584 0.44 +0.5
590,437 - B158DRAFT_0584 0.44 -1.3
590,437 - B158DRAFT_0584 0.44 -1.1
590,437 - B158DRAFT_0584 0.44 -0.1
590,437 - B158DRAFT_0584 0.44 -0.1
590,442 - B158DRAFT_0584 0.45 +0.5
590,452 + B158DRAFT_0584 0.48 +0.4
590,460 - B158DRAFT_0584 0.50 -0.1
590,460 - B158DRAFT_0584 0.50 +0.5
590,520 - B158DRAFT_0584 0.66 -0.3
590,525 + B158DRAFT_0584 0.67 +0.6
590,535 - B158DRAFT_0584 0.70 -0.8
590,545 - B158DRAFT_0584 0.72 -0.8
590,554 + B158DRAFT_0584 0.75 +0.3
590,558 - B158DRAFT_0584 0.76 +0.9
590,568 - B158DRAFT_0584 0.78 -0.2
590,663 - -4.9
590,715 - +2.8
590,730 + +0.0
590,738 - +0.7
590,808 + -0.0
590,808 + -0.5
590,816 - +0.5
590,816 - +0.1
590,816 - -0.8
590,816 - +0.3
590,816 - +1.2
590,854 + +0.7
590,917 - -3.8
590,920 + -0.2
590,920 + +0.2
590,920 + -2.0
590,920 + -1.9
590,920 + -0.1
590,920 + -0.4
590,920 + +0.5
590,928 - +0.3
590,928 - -1.4
590,928 - -3.2
590,928 - -0.1
590,928 - -0.3
590,928 - -2.7
590,928 - -1.5
590,972 - B158DRAFT_0585 0.14 -0.8
591,017 + B158DRAFT_0585 0.19 -0.6
591,024 + B158DRAFT_0585 0.20 +0.9
591,078 + B158DRAFT_0585 0.27 +0.6
591,078 + B158DRAFT_0585 0.27 -0.2
591,078 + B158DRAFT_0585 0.27 +2.1
591,078 + B158DRAFT_0585 0.27 +1.0
591,086 - B158DRAFT_0585 0.28 -0.3
591,086 - B158DRAFT_0585 0.28 -0.0
591,086 - B158DRAFT_0585 0.28 +0.1
591,086 - B158DRAFT_0585 0.28 -3.4
591,086 - B158DRAFT_0585 0.28 +0.9
591,086 - B158DRAFT_0585 0.28 -0.4
591,086 - B158DRAFT_0585 0.28 +0.4
591,103 + B158DRAFT_0585 0.30 -0.1
591,132 + B158DRAFT_0585 0.34 +1.3
591,167 - B158DRAFT_0585 0.38 -1.2
591,190 + B158DRAFT_0585 0.41 -2.1
591,190 + B158DRAFT_0585 0.41 -3.7
591,198 - B158DRAFT_0585 0.42 -3.4
591,198 - B158DRAFT_0585 0.42 +0.5

Or see this region's nucleotide sequence