Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0336 and B158DRAFT_0337 are separated by 103 nucleotides B158DRAFT_0337 and B158DRAFT_0338 are separated by 191 nucleotides B158DRAFT_0338 and B158DRAFT_0339 are separated by 64 nucleotides B158DRAFT_0339 and B158DRAFT_0340 overlap by 41 nucleotides
B158DRAFT_0336: B158DRAFT_0336 - hypothetical protein, at 338,889 to 339,176
_0336
B158DRAFT_0337: B158DRAFT_0337 - hypothetical protein, at 339,280 to 339,687
_0337
B158DRAFT_0338: B158DRAFT_0338 - hypothetical protein, at 339,879 to 340,409
_0338
B158DRAFT_0339: B158DRAFT_0339 - hypothetical protein, at 340,474 to 341,049
_0339
B158DRAFT_0340: B158DRAFT_0340 - hypothetical protein, at 341,009 to 341,374
_0340
Position (kb) 339
340
341 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 338.894 kb on + strand at 338.920 kb on + strand, within B158DRAFT_0336 at 339.007 kb on + strand, within B158DRAFT_0336 at 339.209 kb on + strand at 339.226 kb on + strand at 339.329 kb on - strand, within B158DRAFT_0337 at 339.371 kb on + strand, within B158DRAFT_0337 at 339.379 kb on - strand, within B158DRAFT_0337 at 339.379 kb on - strand, within B158DRAFT_0337 at 339.403 kb on - strand, within B158DRAFT_0337 at 339.418 kb on + strand, within B158DRAFT_0337 at 339.619 kb on - strand, within B158DRAFT_0337 at 339.839 kb on + strand at 339.884 kb on - strand at 339.884 kb on - strand at 339.886 kb on + strand at 339.913 kb on - strand at 339.913 kb on - strand at 340.105 kb on - strand, within B158DRAFT_0338 at 340.136 kb on + strand, within B158DRAFT_0338 at 340.395 kb on - strand at 340.538 kb on - strand, within B158DRAFT_0339 at 340.557 kb on - strand, within B158DRAFT_0339 at 340.680 kb on + strand, within B158DRAFT_0339 at 340.709 kb on + strand, within B158DRAFT_0339 at 340.728 kb on + strand, within B158DRAFT_0339 at 340.830 kb on - strand, within B158DRAFT_0339 at 340.830 kb on - strand, within B158DRAFT_0339 at 340.881 kb on + strand, within B158DRAFT_0339 at 341.005 kb on + strand at 341.013 kb on - strand at 341.015 kb on + strand at 341.236 kb on + strand, within B158DRAFT_0340 at 341.251 kb on - strand, within B158DRAFT_0340
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml remove 338,894 + -1.3 338,920 + B158DRAFT_0336 0.11 -0.6 339,007 + B158DRAFT_0336 0.41 -2.0 339,209 + -0.8 339,226 + +0.3 339,329 - B158DRAFT_0337 0.12 -4.0 339,371 + B158DRAFT_0337 0.22 +0.6 339,379 - B158DRAFT_0337 0.24 -2.0 339,379 - B158DRAFT_0337 0.24 -1.6 339,403 - B158DRAFT_0337 0.30 -0.9 339,418 + B158DRAFT_0337 0.34 +0.1 339,619 - B158DRAFT_0337 0.83 -1.8 339,839 + +0.9 339,884 - -0.5 339,884 - -0.2 339,886 + -4.4 339,913 - +0.6 339,913 - +0.2 340,105 - B158DRAFT_0338 0.43 -1.4 340,136 + B158DRAFT_0338 0.48 -0.1 340,395 - -0.1 340,538 - B158DRAFT_0339 0.11 -0.9 340,557 - B158DRAFT_0339 0.14 +0.1 340,680 + B158DRAFT_0339 0.36 -0.5 340,709 + B158DRAFT_0339 0.41 -0.7 340,728 + B158DRAFT_0339 0.44 +0.4 340,830 - B158DRAFT_0339 0.62 +1.5 340,830 - B158DRAFT_0339 0.62 +0.1 340,881 + B158DRAFT_0339 0.71 +0.8 341,005 + +0.3 341,013 - +0.3 341,015 + +0.6 341,236 + B158DRAFT_0340 0.62 +0.3 341,251 - B158DRAFT_0340 0.66 -1.4
Or see this region's nucleotide sequence