Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0267

Experiment: m.b. Polymyxin B sulfate 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0265 and B158DRAFT_0266 are separated by 6 nucleotidesB158DRAFT_0266 and B158DRAFT_0267 are separated by 44 nucleotidesB158DRAFT_0267 and B158DRAFT_0268 are separated by 160 nucleotides B158DRAFT_0265: B158DRAFT_0265 - Predicted endonuclease containing a URI domain, at 270,776 to 271,084 _0265 B158DRAFT_0266: B158DRAFT_0266 - glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase, at 271,091 to 271,951 _0266 B158DRAFT_0267: B158DRAFT_0267 - ribulose-phosphate 3-epimerase, at 271,996 to 272,673 _0267 B158DRAFT_0268: B158DRAFT_0268 - Protein of unknown function (DUF3050)., at 272,834 to 273,577 _0268 Position (kb) 271 272 273Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 271.071 kb on - strandat 271.079 kb on + strandat 271.089 kb on + strandat 271.203 kb on + strand, within B158DRAFT_0266at 271.251 kb on + strand, within B158DRAFT_0266at 271.259 kb on + strand, within B158DRAFT_0266at 271.259 kb on - strand, within B158DRAFT_0266at 271.330 kb on - strand, within B158DRAFT_0266at 271.368 kb on - strand, within B158DRAFT_0266at 271.395 kb on - strand, within B158DRAFT_0266at 271.453 kb on + strand, within B158DRAFT_0266at 271.453 kb on + strand, within B158DRAFT_0266at 271.453 kb on + strand, within B158DRAFT_0266at 271.453 kb on + strand, within B158DRAFT_0266at 271.453 kb on + strand, within B158DRAFT_0266at 271.453 kb on + strand, within B158DRAFT_0266at 271.453 kb on + strand, within B158DRAFT_0266at 271.458 kb on + strand, within B158DRAFT_0266at 271.458 kb on + strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.461 kb on - strand, within B158DRAFT_0266at 271.466 kb on - strand, within B158DRAFT_0266at 271.466 kb on - strand, within B158DRAFT_0266at 271.633 kb on - strand, within B158DRAFT_0266at 271.633 kb on - strand, within B158DRAFT_0266at 271.743 kb on + strand, within B158DRAFT_0266at 271.799 kb on + strand, within B158DRAFT_0266at 271.873 kb on - strandat 272.001 kb on - strandat 272.701 kb on - strandat 272.701 kb on - strandat 272.701 kb on - strandat 272.701 kb on - strandat 272.701 kb on - strandat 272.756 kb on - strandat 272.767 kb on - strandat 272.785 kb on + strandat 272.785 kb on + strandat 272.785 kb on + strandat 272.785 kb on + strandat 272.785 kb on + strandat 272.793 kb on - strandat 272.793 kb on - strandat 272.839 kb on - strandat 272.839 kb on - strandat 272.841 kb on + strandat 272.993 kb on + strand, within B158DRAFT_0268at 273.043 kb on + strand, within B158DRAFT_0268at 273.043 kb on + strand, within B158DRAFT_0268at 273.043 kb on + strand, within B158DRAFT_0268at 273.043 kb on + strand, within B158DRAFT_0268at 273.043 kb on + strand, within B158DRAFT_0268at 273.051 kb on - strand, within B158DRAFT_0268at 273.051 kb on - strand, within B158DRAFT_0268at 273.051 kb on - strand, within B158DRAFT_0268at 273.169 kb on + strand, within B158DRAFT_0268at 273.191 kb on + strand, within B158DRAFT_0268at 273.193 kb on + strand, within B158DRAFT_0268at 273.201 kb on - strand, within B158DRAFT_0268at 273.201 kb on - strand, within B158DRAFT_0268at 273.201 kb on - strand, within B158DRAFT_0268at 273.218 kb on + strand, within B158DRAFT_0268at 273.239 kb on + strand, within B158DRAFT_0268at 273.239 kb on + strand, within B158DRAFT_0268at 273.333 kb on - strand, within B158DRAFT_0268at 273.416 kb on + strand, within B158DRAFT_0268at 273.465 kb on + strand, within B158DRAFT_0268at 273.465 kb on + strand, within B158DRAFT_0268at 273.465 kb on + strand, within B158DRAFT_0268at 273.473 kb on - strand, within B158DRAFT_0268at 273.515 kb on - strandat 273.533 kb on - strandat 273.537 kb on + strandat 273.555 kb on - strandat 273.556 kb on - strandat 273.597 kb on + strandat 273.605 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.00390625 mg/ml
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271,071 - +0.7
271,079 + -0.4
271,089 + -0.6
271,203 + B158DRAFT_0266 0.13 +0.7
271,251 + B158DRAFT_0266 0.19 -0.5
271,259 + B158DRAFT_0266 0.20 -0.9
271,259 - B158DRAFT_0266 0.20 -1.1
271,330 - B158DRAFT_0266 0.28 +1.0
271,368 - B158DRAFT_0266 0.32 +0.7
271,395 - B158DRAFT_0266 0.35 -2.3
271,453 + B158DRAFT_0266 0.42 +0.9
271,453 + B158DRAFT_0266 0.42 -1.5
271,453 + B158DRAFT_0266 0.42 -1.1
271,453 + B158DRAFT_0266 0.42 -1.9
271,453 + B158DRAFT_0266 0.42 -0.5
271,453 + B158DRAFT_0266 0.42 -0.4
271,453 + B158DRAFT_0266 0.42 -0.5
271,458 + B158DRAFT_0266 0.43 +0.3
271,458 + B158DRAFT_0266 0.43 -0.2
271,461 - B158DRAFT_0266 0.43 -1.3
271,461 - B158DRAFT_0266 0.43 -1.5
271,461 - B158DRAFT_0266 0.43 -0.8
271,461 - B158DRAFT_0266 0.43 +0.7
271,461 - B158DRAFT_0266 0.43 -0.8
271,461 - B158DRAFT_0266 0.43 +0.1
271,461 - B158DRAFT_0266 0.43 -4.6
271,461 - B158DRAFT_0266 0.43 +0.2
271,466 - B158DRAFT_0266 0.44 +0.7
271,466 - B158DRAFT_0266 0.44 +0.9
271,633 - B158DRAFT_0266 0.63 +0.4
271,633 - B158DRAFT_0266 0.63 -1.7
271,743 + B158DRAFT_0266 0.76 +0.4
271,799 + B158DRAFT_0266 0.82 +1.0
271,873 - -0.6
272,001 - -5.0
272,701 - -2.8
272,701 - +0.8
272,701 - -2.1
272,701 - -4.5
272,701 - +0.2
272,756 - +0.0
272,767 - -2.5
272,785 + -1.0
272,785 + +0.0
272,785 + +1.0
272,785 + -0.5
272,785 + -0.4
272,793 - -3.6
272,793 - -0.4
272,839 - +0.2
272,839 - -1.4
272,841 + +1.8
272,993 + B158DRAFT_0268 0.21 -1.1
273,043 + B158DRAFT_0268 0.28 -1.5
273,043 + B158DRAFT_0268 0.28 +0.7
273,043 + B158DRAFT_0268 0.28 -0.6
273,043 + B158DRAFT_0268 0.28 +0.2
273,043 + B158DRAFT_0268 0.28 -0.2
273,051 - B158DRAFT_0268 0.29 +0.4
273,051 - B158DRAFT_0268 0.29 -2.2
273,051 - B158DRAFT_0268 0.29 +1.6
273,169 + B158DRAFT_0268 0.45 -0.2
273,191 + B158DRAFT_0268 0.48 +0.3
273,193 + B158DRAFT_0268 0.48 -0.1
273,201 - B158DRAFT_0268 0.49 +0.3
273,201 - B158DRAFT_0268 0.49 -0.0
273,201 - B158DRAFT_0268 0.49 -1.8
273,218 + B158DRAFT_0268 0.52 -1.0
273,239 + B158DRAFT_0268 0.54 +0.6
273,239 + B158DRAFT_0268 0.54 +0.9
273,333 - B158DRAFT_0268 0.67 -0.4
273,416 + B158DRAFT_0268 0.78 -0.0
273,465 + B158DRAFT_0268 0.85 -1.0
273,465 + B158DRAFT_0268 0.85 -0.3
273,465 + B158DRAFT_0268 0.85 -0.2
273,473 - B158DRAFT_0268 0.86 -1.3
273,515 - +0.4
273,533 - -0.6
273,537 + -0.6
273,555 - +0.4
273,556 - -0.8
273,597 + +0.1
273,605 - -3.1

Or see this region's nucleotide sequence