Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2302

Experiment: m.b. copper (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2299 and B158DRAFT_2300 are separated by 6 nucleotidesB158DRAFT_2300 and B158DRAFT_2301 are separated by 77 nucleotidesB158DRAFT_2301 and B158DRAFT_2302 are separated by 26 nucleotidesB158DRAFT_2302 and B158DRAFT_2303 are separated by 3 nucleotidesB158DRAFT_2303 and B158DRAFT_2304 are separated by 86 nucleotides B158DRAFT_2299: B158DRAFT_2299 - Membrane proteins related to metalloendopeptidases, at 462,731 to 463,735 _2299 B158DRAFT_2300: B158DRAFT_2300 - hypothetical protein, at 463,742 to 464,131 _2300 B158DRAFT_2301: B158DRAFT_2301 - Stress-induced morphogen (activity unknown), at 464,209 to 464,472 _2301 B158DRAFT_2302: B158DRAFT_2302 - Uncharacterized protein conserved in bacteria, at 464,499 to 464,798 _2302 B158DRAFT_2303: B158DRAFT_2303 - Intracellular septation protein A, at 464,802 to 465,389 _2303 B158DRAFT_2304: B158DRAFT_2304 - Predicted metal-dependent phosphoesterases (PHP family), at 465,476 to 466,306 _2304 Position (kb) 464 465Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 463.519 kb on + strand, within B158DRAFT_2299at 463.537 kb on - strand, within B158DRAFT_2299at 463.612 kb on + strand, within B158DRAFT_2299at 463.612 kb on + strand, within B158DRAFT_2299at 463.620 kb on - strand, within B158DRAFT_2299at 463.646 kb on + strandat 463.693 kb on + strandat 463.710 kb on - strandat 463.845 kb on + strand, within B158DRAFT_2300at 463.922 kb on + strand, within B158DRAFT_2300at 463.923 kb on - strand, within B158DRAFT_2300at 463.930 kb on - strand, within B158DRAFT_2300at 463.953 kb on + strand, within B158DRAFT_2300at 463.961 kb on - strand, within B158DRAFT_2300at 464.023 kb on + strand, within B158DRAFT_2300at 464.037 kb on + strand, within B158DRAFT_2300at 464.037 kb on + strand, within B158DRAFT_2300at 464.045 kb on - strand, within B158DRAFT_2300at 464.055 kb on + strand, within B158DRAFT_2300at 464.055 kb on + strand, within B158DRAFT_2300at 464.055 kb on - strand, within B158DRAFT_2300at 464.055 kb on - strand, within B158DRAFT_2300at 464.079 kb on + strand, within B158DRAFT_2300at 464.087 kb on - strand, within B158DRAFT_2300at 464.152 kb on + strandat 464.155 kb on + strandat 464.173 kb on - strandat 464.184 kb on + strandat 464.184 kb on + strandat 464.205 kb on + strandat 464.294 kb on + strand, within B158DRAFT_2301at 464.313 kb on + strand, within B158DRAFT_2301at 464.365 kb on + strand, within B158DRAFT_2301at 464.379 kb on - strand, within B158DRAFT_2301at 464.387 kb on - strand, within B158DRAFT_2301at 464.414 kb on + strand, within B158DRAFT_2301at 464.415 kb on + strand, within B158DRAFT_2301at 464.417 kb on - strand, within B158DRAFT_2301at 464.421 kb on - strand, within B158DRAFT_2301at 464.422 kb on - strand, within B158DRAFT_2301at 464.423 kb on - strand, within B158DRAFT_2301at 464.424 kb on - strand, within B158DRAFT_2301at 464.448 kb on + strandat 464.497 kb on + strandat 464.540 kb on + strand, within B158DRAFT_2302at 464.548 kb on - strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.575 kb on + strand, within B158DRAFT_2302at 464.581 kb on + strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.583 kb on - strand, within B158DRAFT_2302at 464.588 kb on - strand, within B158DRAFT_2302at 464.633 kb on + strand, within B158DRAFT_2302at 464.668 kb on + strand, within B158DRAFT_2302at 464.668 kb on + strand, within B158DRAFT_2302at 464.670 kb on + strand, within B158DRAFT_2302at 464.671 kb on - strand, within B158DRAFT_2302at 464.676 kb on - strand, within B158DRAFT_2302at 464.676 kb on - strand, within B158DRAFT_2302at 464.676 kb on - strand, within B158DRAFT_2302at 464.676 kb on - strand, within B158DRAFT_2302at 464.682 kb on - strand, within B158DRAFT_2302at 464.718 kb on - strand, within B158DRAFT_2302at 464.734 kb on + strand, within B158DRAFT_2302at 464.734 kb on - strand, within B158DRAFT_2302at 464.734 kb on - strand, within B158DRAFT_2302at 464.823 kb on - strandat 464.837 kb on + strandat 464.892 kb on - strand, within B158DRAFT_2303at 464.909 kb on - strand, within B158DRAFT_2303at 464.942 kb on - strand, within B158DRAFT_2303at 464.950 kb on - strand, within B158DRAFT_2303at 464.963 kb on - strand, within B158DRAFT_2303at 464.963 kb on - strand, within B158DRAFT_2303at 464.965 kb on + strand, within B158DRAFT_2303at 464.973 kb on - strand, within B158DRAFT_2303at 464.982 kb on + strand, within B158DRAFT_2303at 464.994 kb on + strand, within B158DRAFT_2303at 465.059 kb on + strand, within B158DRAFT_2303at 465.061 kb on + strand, within B158DRAFT_2303at 465.136 kb on + strand, within B158DRAFT_2303at 465.187 kb on - strand, within B158DRAFT_2303at 465.200 kb on - strand, within B158DRAFT_2303at 465.270 kb on + strand, within B158DRAFT_2303at 465.315 kb on - strand, within B158DRAFT_2303at 465.385 kb on + strandat 465.392 kb on - strandat 465.392 kb on - strandat 465.425 kb on - strandat 465.476 kb on - strandat 465.495 kb on + strandat 465.537 kb on + strandat 465.556 kb on + strandat 465.561 kb on + strand, within B158DRAFT_2304at 465.569 kb on - strand, within B158DRAFT_2304at 465.599 kb on - strand, within B158DRAFT_2304at 465.634 kb on - strand, within B158DRAFT_2304at 465.665 kb on - strand, within B158DRAFT_2304at 465.684 kb on + strand, within B158DRAFT_2304at 465.684 kb on + strand, within B158DRAFT_2304at 465.692 kb on - strand, within B158DRAFT_2304at 465.692 kb on - strand, within B158DRAFT_2304at 465.692 kb on - strand, within B158DRAFT_2304at 465.692 kb on - strand, within B158DRAFT_2304at 465.767 kb on + strand, within B158DRAFT_2304

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.625 mM
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463,519 + B158DRAFT_2299 0.78 -0.4
463,537 - B158DRAFT_2299 0.80 -2.5
463,612 + B158DRAFT_2299 0.88 -3.4
463,612 + B158DRAFT_2299 0.88 -0.2
463,620 - B158DRAFT_2299 0.88 -0.7
463,646 + -1.1
463,693 + -0.5
463,710 - -1.6
463,845 + B158DRAFT_2300 0.26 -1.3
463,922 + B158DRAFT_2300 0.46 +0.2
463,923 - B158DRAFT_2300 0.46 -1.9
463,930 - B158DRAFT_2300 0.48 -1.5
463,953 + B158DRAFT_2300 0.54 -0.3
463,961 - B158DRAFT_2300 0.56 -0.6
464,023 + B158DRAFT_2300 0.72 -1.4
464,037 + B158DRAFT_2300 0.76 -1.2
464,037 + B158DRAFT_2300 0.76 -0.6
464,045 - B158DRAFT_2300 0.78 +0.2
464,055 + B158DRAFT_2300 0.80 -0.5
464,055 + B158DRAFT_2300 0.80 -1.0
464,055 - B158DRAFT_2300 0.80 -1.9
464,055 - B158DRAFT_2300 0.80 -0.2
464,079 + B158DRAFT_2300 0.86 +0.6
464,087 - B158DRAFT_2300 0.88 -0.6
464,152 + -0.3
464,155 + -0.2
464,173 - -0.9
464,184 + -1.6
464,184 + -1.2
464,205 + -0.5
464,294 + B158DRAFT_2301 0.32 -1.7
464,313 + B158DRAFT_2301 0.39 -1.6
464,365 + B158DRAFT_2301 0.59 -0.5
464,379 - B158DRAFT_2301 0.64 -0.5
464,387 - B158DRAFT_2301 0.67 -0.4
464,414 + B158DRAFT_2301 0.78 -0.1
464,415 + B158DRAFT_2301 0.78 -0.0
464,417 - B158DRAFT_2301 0.79 -1.4
464,421 - B158DRAFT_2301 0.80 +0.8
464,422 - B158DRAFT_2301 0.81 -0.6
464,423 - B158DRAFT_2301 0.81 -0.4
464,424 - B158DRAFT_2301 0.81 -0.5
464,448 + -1.0
464,497 + +0.6
464,540 + B158DRAFT_2302 0.14 -0.7
464,548 - B158DRAFT_2302 0.16 -1.8
464,575 + B158DRAFT_2302 0.25 -1.4
464,575 + B158DRAFT_2302 0.25 -0.4
464,575 + B158DRAFT_2302 0.25 -0.9
464,575 + B158DRAFT_2302 0.25 +0.1
464,575 + B158DRAFT_2302 0.25 +0.0
464,575 + B158DRAFT_2302 0.25 -1.8
464,575 + B158DRAFT_2302 0.25 -1.0
464,575 + B158DRAFT_2302 0.25 -0.1
464,575 + B158DRAFT_2302 0.25 +0.4
464,575 + B158DRAFT_2302 0.25 -0.1
464,575 + B158DRAFT_2302 0.25 +2.4
464,575 + B158DRAFT_2302 0.25 -0.7
464,575 + B158DRAFT_2302 0.25 +0.1
464,575 + B158DRAFT_2302 0.25 -0.4
464,575 + B158DRAFT_2302 0.25 +0.3
464,575 + B158DRAFT_2302 0.25 +0.4
464,575 + B158DRAFT_2302 0.25 -0.0
464,575 + B158DRAFT_2302 0.25 -0.8
464,581 + B158DRAFT_2302 0.27 -0.2
464,583 - B158DRAFT_2302 0.28 +0.9
464,583 - B158DRAFT_2302 0.28 -1.1
464,583 - B158DRAFT_2302 0.28 -0.3
464,583 - B158DRAFT_2302 0.28 +2.2
464,583 - B158DRAFT_2302 0.28 -0.7
464,583 - B158DRAFT_2302 0.28 +0.3
464,583 - B158DRAFT_2302 0.28 +1.3
464,583 - B158DRAFT_2302 0.28 +0.1
464,583 - B158DRAFT_2302 0.28 +0.1
464,583 - B158DRAFT_2302 0.28 -1.1
464,583 - B158DRAFT_2302 0.28 -0.6
464,583 - B158DRAFT_2302 0.28 -0.2
464,583 - B158DRAFT_2302 0.28 -0.3
464,583 - B158DRAFT_2302 0.28 +0.2
464,583 - B158DRAFT_2302 0.28 +0.0
464,583 - B158DRAFT_2302 0.28 -0.2
464,583 - B158DRAFT_2302 0.28 +0.9
464,588 - B158DRAFT_2302 0.30 +0.8
464,633 + B158DRAFT_2302 0.45 -1.2
464,668 + B158DRAFT_2302 0.56 -0.9
464,668 + B158DRAFT_2302 0.56 -1.2
464,670 + B158DRAFT_2302 0.57 -1.3
464,671 - B158DRAFT_2302 0.57 -0.4
464,676 - B158DRAFT_2302 0.59 -1.2
464,676 - B158DRAFT_2302 0.59 +0.0
464,676 - B158DRAFT_2302 0.59 -0.5
464,676 - B158DRAFT_2302 0.59 -1.4
464,682 - B158DRAFT_2302 0.61 -0.8
464,718 - B158DRAFT_2302 0.73 +1.0
464,734 + B158DRAFT_2302 0.78 -0.8
464,734 - B158DRAFT_2302 0.78 +0.2
464,734 - B158DRAFT_2302 0.78 -1.3
464,823 - -0.2
464,837 + +2.9
464,892 - B158DRAFT_2303 0.15 -2.4
464,909 - B158DRAFT_2303 0.18 -1.0
464,942 - B158DRAFT_2303 0.24 -2.6
464,950 - B158DRAFT_2303 0.25 +5.1
464,963 - B158DRAFT_2303 0.27 +0.6
464,963 - B158DRAFT_2303 0.27 +1.4
464,965 + B158DRAFT_2303 0.28 -1.2
464,973 - B158DRAFT_2303 0.29 -0.9
464,982 + B158DRAFT_2303 0.31 -1.7
464,994 + B158DRAFT_2303 0.33 -2.1
465,059 + B158DRAFT_2303 0.44 -1.9
465,061 + B158DRAFT_2303 0.44 -0.8
465,136 + B158DRAFT_2303 0.57 -2.0
465,187 - B158DRAFT_2303 0.65 -1.2
465,200 - B158DRAFT_2303 0.68 -0.5
465,270 + B158DRAFT_2303 0.80 +0.1
465,315 - B158DRAFT_2303 0.87 -0.1
465,385 + -1.4
465,392 - +0.4
465,392 - +1.4
465,425 - +1.1
465,476 - -0.0
465,495 + +1.7
465,537 + -1.4
465,556 + -0.6
465,561 + B158DRAFT_2304 0.10 +3.0
465,569 - B158DRAFT_2304 0.11 -0.5
465,599 - B158DRAFT_2304 0.15 -0.7
465,634 - B158DRAFT_2304 0.19 -0.3
465,665 - B158DRAFT_2304 0.23 +0.7
465,684 + B158DRAFT_2304 0.25 -0.1
465,684 + B158DRAFT_2304 0.25 -1.5
465,692 - B158DRAFT_2304 0.26 -1.0
465,692 - B158DRAFT_2304 0.26 -2.0
465,692 - B158DRAFT_2304 0.26 -0.4
465,692 - B158DRAFT_2304 0.26 -0.2
465,767 + B158DRAFT_2304 0.35 -2.2

Or see this region's nucleotide sequence